Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 2.1e-45 185.3 91 100.0
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 1.0e-18 96.7 54 85.2
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 1.7e-18 95.9 53 84.9
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 2.2e-18 95.5 54 83.3
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 2.9e-18 95.1 54 83.3
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 2.9e-18 95.1 54 83.3
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 5.0e-18 94.4 54 81.5
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 5.0e-18 94.4 53 83.0
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 8.5e-18 93.6 53 81.1
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 8.5e-18 93.6 54 81.5
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 2.5e-17 92.0 54 77.8
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 2.5e-17 92.0 54 79.6
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 3.2e-17 91.7 48 91.7
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 3.2e-17 91.7 54 79.6
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 4.2e-17 91.3 54 79.6
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 4.2e-17 91.3 51 82.4
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 5.5e-17 90.9 54 79.6
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 5.5e-17 90.9 53 77.4
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 7.2e-17 90.5 54 75.9
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 7.2e-17 90.5 51 82.4
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 9.3e-17 90.1 54 77.8
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 1.2e-16 89.7 48 87.5
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.2e-16 89.7 54 75.9
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 1.6e-16 89.4 53 79.2
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 1.6e-16 89.4 53 79.2
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 1.6e-16 89.4 53 79.2
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 1.6e-16 89.4 51 78.4
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 1.6e-16 89.4 51 78.4
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 1.6e-16 89.4 51 78.4
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 1.6e-16 89.4 51 78.4
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.6e-16 89.4 54 74.1
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 2.1e-16 89.0 53 75.5
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 2.1e-16 89.0 53 79.2
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 2.1e-16 89.0 51 78.4
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 2.1e-16 89.0 54 77.8
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 2.7e-16 88.6 54 77.8
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 2.7e-16 88.6 54 77.8
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 2.7e-16 88.6 54 74.1
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 2.7e-16 88.6 51 78.4
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 2.7e-16 88.6 51 78.4
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 2.7e-16 88.6 54 75.9
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 3.6e-16 88.2 53 73.6
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 3.6e-16 88.2 53 73.6
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 3.6e-16 88.2 50 80.0
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 3.6e-16 88.2 54 72.2
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 4.6e-16 87.8 54 74.1
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 4.6e-16 87.8 54 74.1
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 4.6e-16 87.8 54 74.1
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 4.6e-16 87.8 51 76.5
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 4.6e-16 87.8 54 72.2
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 4.6e-16 87.8 54 74.1
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 4.6e-16 87.8 54 72.2
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 4.6e-16 87.8 54 77.8
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 4.6e-16 87.8 54 72.2
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 4.6e-16 87.8 53 73.6
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 4.6e-16 87.8 54 75.9
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 4.6e-16 87.8 54 74.1
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 6.1e-16 87.4 54 77.8
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 7.9e-16 87.0 53 73.6
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 7.9e-16 87.0 54 75.9
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 7.9e-16 87.0 54 70.4
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 7.9e-16 87.0 51 76.5
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 1.4e-15 86.3 53 71.7
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 1.4e-15 86.3 54 70.4
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 1.4e-15 86.3 54 72.2
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 1.4e-15 86.3 54 72.2
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.4e-15 86.3 54 72.2
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.4e-15 86.3 54 72.2
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.4e-15 86.3 54 72.2
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.4e-15 86.3 54 72.2
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.4e-15 86.3 54 72.2
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 1.4e-15 86.3 50 80.0
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 1.4e-15 86.3 54 74.1
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 1.4e-15 86.3 54 72.2
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 1.8e-15 85.9 53 71.7
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 1.8e-15 85.9 53 71.7
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 1.8e-15 85.9 53 73.6
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 1.8e-15 85.9 54 75.9
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 1.8e-15 85.9 53 73.6
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 2.3e-15 85.5 53 71.7
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 2.3e-15 85.5 53 71.7
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 2.3e-15 85.5 53 71.7
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 2.3e-15 85.5 53 71.7
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 2.3e-15 85.5 53 71.7
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 2.3e-15 85.5 54 70.4
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 2.3e-15 85.5 48 83.3
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 2.3e-15 85.5 53 71.7
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 2.3e-15 85.5 53 71.7
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 2.3e-15 85.5 54 70.4
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 3.0e-15 85.1 53 71.7
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 3.0e-15 85.1 54 77.8
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 3.9e-15 84.7 48 79.2
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 3.9e-15 84.7 48 81.2
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 3.9e-15 84.7 48 81.2
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 5.1e-15 84.3 53 69.8
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 6.7e-15 84.0 48 79.2
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.1e-14 83.2 54 70.4
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 1.1e-14 83.2 50 72.0
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 1.5e-14 82.8 53 69.8
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 1.5e-14 82.8 47 83.0
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.5e-14 82.8 47 80.9
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.5e-14 82.8 47 80.9
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.5e-14 82.8 47 80.9
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 1.9e-14 82.4 51 72.5
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 1.9e-14 82.4 55 70.9
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 4.3e-14 81.3 44 79.5
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 4.3e-14 81.3 50 74.0
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 4.3e-14 81.3 50 74.0
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 5.7e-14 80.9 50 70.0
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 9.7e-14 80.1 53 67.9
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 1.3e-13 79.7 54 66.7
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 1.3e-13 79.7 54 66.7
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 1.7e-13 79.3 51 74.5
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 4.8e-13 77.8 54 68.5
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 6.3e-13 77.4 48 72.9
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 6.3e-13 77.4 48 72.9
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 3.8e-10 68.2 41 78.0
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 1.9e-09 65.9 69 46.4
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 6.7e-07 57.4 50 46.0
TAR627G1128 Trochodendron aralioides HOM05D006309 ORTHO05D007937 8.8e-07 57.0 37 75.7


User provided reference genes

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