Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g06494_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D243247 5.6e-53 210.7 107 100.0
MBI06_g06495_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D002924 6.6e-38 160.6 114 76.3
MBI06_g06487_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D010006 5.3e-19 97.8 102 54.9
MBI06_g06492_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D025795 4.9e-17 91.3 100 53.0
MBI06_g06491_MAGBIO Magnolia biondii HOM05D002650 ORTHO05D002924 2.1e-12 75.9 70 61.4
MBI07_g12798_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D010006 1.7e-09 66.2 110 40.9
CDE10G1187 Ceratophyllum demersum HOM05D000404 ORTHO05D010006 6.5e-09 64.3 112 38.4
CSS0029128 Camellia sinensis var. sinensis HOM05D000404 ORTHO05D010006 1.4e-08 63.2 105 39.0
CSS0032302 Camellia sinensis var. sinensis HOM05D000404 ORTHO05D010006 1.4e-08 63.2 105 39.0
Cc08_g16440 Coffea canephora HOM05D000404 ORTHO05D010006 3.2e-08 62.0 102 39.2
Rhsim07G0080000 Rhododendron simsii HOM05D000404 ORTHO05D010006 3.2e-08 62.0 102 37.3
FAN04G1492 Fragaria x ananassa HOM05D000404 ORTHO05D010006 4.2e-08 61.6 99 41.4
FAN08G2705 Fragaria x ananassa HOM05D000404 ORTHO05D010006 4.2e-08 61.6 99 41.4
FAN13G2736 Fragaria x ananassa HOM05D000404 ORTHO05D010006 4.2e-08 61.6 99 41.4
RcHm_v2.0_Chr7g0186231 Rosa chinensis HOM05D000404 ORTHO05D010006 4.2e-08 61.6 99 41.4
FvH4_5g11520 Fragaria vesca HOM05D000404 ORTHO05D010006 9.3e-08 60.5 98 41.8
FAN18G3069 Fragaria x ananassa HOM05D000404 ORTHO05D010006 9.3e-08 60.5 98 41.8
FAN18G3401 Fragaria x ananassa HOM05D000404 ORTHO05D010006 9.3e-08 60.5 98 41.8
MD06G1112400 Malus domestica HOM05D000404 ORTHO05D010006 9.3e-08 60.5 99 39.4
ClCG07G002450 Citrullus lanatus HOM05D000404 ORTHO05D010006 1.2e-07 60.1 53 54.7
Prupe.5G125700 Prunus persica HOM05D000404 ORTHO05D010006 1.2e-07 60.1 99 41.4
MD14G1133900 Malus domestica HOM05D000404 ORTHO05D010006 1.6e-07 59.7 99 39.4
CANSAT21G0122 Cannabis sativa HOM05D000404 ORTHO05D010006 2.1e-07 59.3 80 43.8
TWI60G0437 Tripterygium wilfordii HOM05D000404 ORTHO05D010006 2.1e-07 59.3 112 36.6
CiPaw.11G116200 Carya illinoinensis HOM05D000404 ORTHO05D010006 2.7e-07 58.9 82 43.9
Ciclev10019360m.g Citrus clementina HOM05D000404 ORTHO05D010006 2.7e-07 58.9 110 38.2
Dinv34690 Davidia involucrata HOM05D000404 ORTHO05D010006 3.5e-07 58.5 104 40.4
vmacro13873 Vaccinium macrocarpon HOM05D000404 ORTHO05D010006 3.5e-07 58.5 90 40.0
Peaxi162Scf00074g00424 Petunia axillaris HOM05D000404 ORTHO05D010006 4.6e-07 58.2 90 41.1
TWI81G0479 Tripterygium wilfordii HOM05D000404 ORTHO05D010006 4.6e-07 58.2 112 35.7
Atru.chr9.1951 Acer truncatum HOM05D000404 ORTHO05D010006 6.0e-07 57.8 51 54.9
CsaV3_3G030250 Cucumis sativus L. HOM05D000404 ORTHO05D010006 7.9e-07 57.4 53 52.8
Haze_09117 Corylus avellana HOM05D000404 ORTHO05D010006 1.3e-06 56.6 82 42.7
Nitab4.5_0002367g0220 Nicotiana tabacum HOM05D000404 ORTHO05D010006 1.3e-06 56.6 90 40.0
Sed0007177 Sechium edule HOM05D000404 ORTHO05D010006 1.3e-06 56.6 51 56.9
TAR374G1736 Trochodendron aralioides HOM05D000404 ORTHO05D010006 1.3e-06 56.6 112 35.7
Cfa011964 Carpinus fangiana HOM05D000404 ORTHO05D010006 1.8e-06 56.2 82 42.7
MELO3C022739.2 Cucumis melo HOM05D000404 ORTHO05D010006 2.3e-06 55.8 53 50.9
Oeu009986.2 Olea europaea HOM05D000404 ORTHO05D010006 3.0e-06 55.5 90 38.9
Potri.001G087600 Populus trichocarpa HOM05D000404 ORTHO05D010006 3.0e-06 55.5 102 35.3
QL02p029339 Quercus lobata HOM05D000404 ORTHO05D010006 3.0e-06 55.5 110 37.3
Nitab4.5_0002439g0040 Nicotiana tabacum HOM05D000404 ORTHO05D010006 3.9e-06 55.1 90 38.9
HPP92_005284 Vanilla planifolia HOM05D000404 ORTHO05D010006 5.1e-06 54.7 87 37.9
Actinidia14163 Actinidia chinensis HOM05D000404 ORTHO05D010006 8.7e-06 53.9 104 34.6


User provided reference genes

Program Settings