Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 2.7e-252 874.8 423 100.0
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 2.8e-156 555.8 396 68.4
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 1.1e-152 543.9 400 67.5
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 4.2e-152 542.0 398 67.3
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 1.1e-149 533.9 401 65.6
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.9e-145 518.5 400 64.5
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.4e-144 516.9 374 69.3
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 4.2e-144 515.4 417 62.4
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 6.0e-143 511.5 394 64.7
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 3.0e-142 509.2 340 70.6
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 1.1e-141 507.3 401 63.8
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.5e-141 506.9 409 64.5
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 3.3e-141 505.8 348 69.0
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 3.3e-141 505.8 348 69.0
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.6e-140 503.4 395 63.8
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 2.2e-140 503.1 344 68.6
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 4.8e-140 501.9 391 63.7
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 6.3e-140 501.5 408 63.2
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.1e-139 500.7 417 61.4
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 1.4e-139 500.4 347 68.0
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 2.0e-138 496.5 394 62.4
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 2.0e-138 496.5 394 62.2
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 3.4e-138 495.7 384 65.1
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 5.9e-138 495.0 393 62.8
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.0e-137 494.2 341 69.8
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.7e-137 493.4 362 65.7
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 5.0e-137 491.9 405 60.5
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 5.0e-137 491.9 368 65.5
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 2.5e-136 489.6 371 65.2
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 3.2e-136 489.2 340 69.4
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 2.1e-135 486.5 398 63.6
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.7e-135 486.1 417 59.2
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 2.7e-135 486.1 394 62.9
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 1.4e-134 483.8 342 67.5
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 2.3e-134 483.0 382 64.1
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 3.9e-134 482.3 352 65.3
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 5.1e-134 481.9 338 68.0
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 8.8e-134 481.1 348 65.8
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 2.5e-133 479.6 404 59.2
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 1.3e-132 477.2 346 64.5
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.2e-132 476.5 382 63.1
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 1.1e-131 474.2 342 67.0
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.1e-131 474.2 345 65.5
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.4e-131 473.8 368 63.6
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.8e-131 473.4 368 63.6
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 2.4e-131 473.0 340 65.3
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 3.1e-131 472.6 346 64.2
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 5.3e-131 471.9 368 63.3
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 5.3e-131 471.9 335 66.0
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 6.9e-131 471.5 346 65.0
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.5e-130 470.3 348 64.1
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 1.3e-129 467.2 351 63.2
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 5.0e-129 465.3 386 59.1
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 2.5e-128 463.0 345 66.1
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 7.2e-128 461.5 366 64.8
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.2e-127 460.7 351 64.1
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.2e-127 460.7 351 64.1
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 2.7e-127 459.5 351 64.1
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.4e-126 457.2 391 59.6
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 1.8e-126 456.8 350 63.1
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 1.5e-125 453.8 345 64.6
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 2.0e-125 453.4 351 63.5
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 2.6e-125 453.0 341 64.5
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 4.4e-125 452.2 340 64.7
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 1.3e-124 450.7 352 62.8
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 1.7e-124 450.3 351 63.2
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 2.2e-124 449.9 344 63.1
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 8.2e-124 448.0 390 59.2
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 1.1e-123 447.6 352 63.1
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 2.4e-123 446.4 351 61.5
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 5.3e-123 445.3 359 62.1
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 9.1e-123 444.5 349 62.8
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 1.5e-122 443.7 339 63.4
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 5.9e-122 441.8 379 58.6
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.3e-121 440.7 343 62.4
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.9e-120 436.8 401 57.6
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 4.2e-120 435.6 401 57.6
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 3.3e-117 426.0 450 51.8
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 5.7e-117 425.2 334 62.6
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 4.5e-114 415.6 399 54.1
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.0e-110 404.4 361 58.7
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 5.2e-110 402.1 356 58.7
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 2.0e-109 400.2 341 58.9
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 8.2e-108 394.8 271 66.1
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 4.1e-107 392.5 329 59.6
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 5.9e-106 388.7 392 52.8
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 2.5e-104 383.3 523 44.2
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 5.7e-101 372.1 300 61.3
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 5.7e-101 372.1 277 61.7
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 8.3e-100 368.2 352 54.5
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 6.6e-97 358.6 254 66.5
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 1.2e-95 354.4 289 61.2
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.5e-93 347.4 279 62.4
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 9.2e-91 338.2 329 49.8
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 1.1e-88 331.3 332 49.7
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 4.0e-86 322.8 281 55.5
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 4.7e-79 299.3 426 43.4
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.4e-78 297.7 394 45.4
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 8.9e-78 295.0 168 75.6
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 2.5e-72 276.9 341 42.5
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.5e-69 267.7 177 67.2
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 1.9e-59 234.2 351 40.2
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 9.9e-37 158.7 148 53.4
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 3.5e-34 150.2 105 71.4
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.3e-30 136.3 78 79.5
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 3.8e-28 130.2 101 64.4
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 4.2e-19 100.1 100 51.0
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.1e-17 93.2 68 69.1
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.3e-12 78.6 58 62.1
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 2.7e-10 70.9 52 69.2
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.8e-09 68.2 47 59.6
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.5e-08 65.1 38 71.1
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 4.4e-08 63.5 57 50.9


User provided reference genes

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