Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 5.8e-31 137.1 79 100.0
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.1e-13 79.7 85 70.6
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 1.2e-12 76.3 85 64.7
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 1.3e-11 72.8 81 63.0
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 1.1e-10 69.7 79 59.5
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 2.5e-10 68.6 82 57.3
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 5.6e-10 67.4 81 59.3
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 7.4e-10 67.0 83 60.2
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 9.6e-10 66.6 82 61.0
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 1.3e-09 66.2 79 58.2
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 2.8e-09 65.1 80 57.5
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 2.8e-09 65.1 79 57.0
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 3.7e-09 64.7 79 53.2
Nn1g04077 Nelumbo nucifera HOM05D005953 ORTHO05D004056 4.8e-09 64.3 87 56.3
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 2.4e-08 62.0 79 58.2
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 4.0e-08 61.2 83 51.8
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 4.0e-08 61.2 79 55.7
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 6.9e-08 60.5 79 55.7
CSS0003921 Camellia sinensis var. sinensis HOM05D008304 ORTHO05D004056 9.0e-08 60.1 89 51.7
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.5e-07 59.3 79 53.2
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 2.0e-07 58.9 78 52.6
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 2.0e-07 58.9 78 52.6
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.4e-07 58.2 79 53.2
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 3.4e-07 58.2 79 50.6
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 3.4e-07 58.2 79 51.9
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 3.4e-07 58.2 79 51.9
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 4.5e-07 57.8 79 54.4
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 7.6e-07 57.0 79 53.2
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 7.6e-07 57.0 79 51.9
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 7.6e-07 57.0 79 51.9
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 7.6e-07 57.0 82 56.1
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 9.9e-07 56.6 81 50.6
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 9.9e-07 56.6 85 50.6
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 9.9e-07 56.6 82 48.8
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 1.3e-06 56.2 80 56.2
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 1.7e-06 55.8 79 51.9
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 1.7e-06 55.8 79 50.6
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 1.7e-06 55.8 79 50.6
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 2.2e-06 55.5 79 51.9
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 3.8e-06 54.7 84 53.6
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 3.8e-06 54.7 82 52.4
COL.COLO4_10829 Corchorus olitorius HOM05D008304 ORTHO05D004056 3.8e-06 54.7 82 54.9
arahy.Tifrunner.gnm1.ann1.GJ3E3V Arachis hypogaea HOM05D005953 ORTHO05D004056 4.9e-06 54.3 27 96.3
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 4.9e-06 54.3 81 50.6
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 6.4e-06 53.9 79 50.6
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 6.4e-06 53.9 91 46.2
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 6.4e-06 53.9 79 49.4
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 6.4e-06 53.9 82 50.0
arahy.Tifrunner.gnm1.ann1.4Y3SQC Arachis hypogaea HOM05D005953 ORTHO05D004056 8.4e-06 53.5 39 76.9
Lsat_1_v5_gn_4_66421 Lactuca sativa HOM05D005953 ORTHO05D004056 8.4e-06 53.5 69 56.5
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 8.4e-06 53.5 82 50.0


User provided reference genes

Program Settings