Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g06478_MAGBIO Magnolia biondii HOM05D002664 ORTHO05D002974 3.2e-108 395.2 217 100.0
PGR042G3927 Punica granatum HOM05D002664 ORTHO05D002974 2.2e-11 73.6 67 59.7
Solyc03g093370.2 Solanum lycopersicum HOM05D002664 ORTHO05D002974 3.1e-10 69.7 224 31.2
SHI14034 Sapria himalayana HOM05D002664 ORTHO05D002974 4.1e-10 69.3 72 52.8
ClCG01G001100 Citrullus lanatus HOM05D002664 ORTHO05D002974 5.3e-10 68.9 71 53.5
Sopen03g024180 Solanum pennellii HOM05D002664 ORTHO05D002974 5.3e-10 68.9 224 30.8
PGSC0003DMG400018845 Solanum tuberosum HOM05D002664 ORTHO05D002974 9.1e-10 68.2 222 31.1
Dinv06579 Davidia involucrata HOM05D002664 ORTHO05D002974 1.5e-09 67.4 152 35.5
Nitab4.5_0001267g0070 Nicotiana tabacum HOM05D002664 ORTHO05D002974 2.0e-09 67.0 243 29.2
Gohir.A07G042500 Gossypium hirsutum HOM05D002664 ORTHO05D002974 2.6e-09 66.6 65 53.8
Peaxi162Scf00271g00835 Petunia axillaris HOM05D002664 ORTHO05D002974 2.6e-09 66.6 244 29.1
Rhsim09G0190200 Rhododendron simsii HOM05D002664 ORTHO05D002974 2.6e-09 66.6 80 45.0
Actinidia13593 Actinidia chinensis HOM05D002664 ORTHO05D002974 4.5e-09 65.9 48 66.7
Nn1g00921 Nelumbo nucifera HOM05D002664 ORTHO05D002974 4.5e-09 65.9 75 53.3
CAN.G485.5 Capsicum annuum HOM05D002664 ORTHO05D002974 5.9e-09 65.5 223 28.7
Rhsim03G0164400 Rhododendron simsii HOM05D002664 ORTHO05D002974 7.7e-09 65.1 71 49.3
Nitab4.5_0001358g0010 Nicotiana tabacum HOM05D002664 ORTHO05D002974 1.0e-08 64.7 235 28.1
Gohir.D07G046800 Gossypium hirsutum HOM05D002664 ORTHO05D002974 1.3e-08 64.3 65 52.3
Gorai.001G049900 Gossypium raimondii HOM05D002664 ORTHO05D002974 1.3e-08 64.3 65 52.3
Cfa008177 Carpinus fangiana HOM05D002664 ORTHO05D002974 2.2e-08 63.5 56 62.5
Manes.14G037800 Manihot esculenta HOM05D002664 ORTHO05D002974 2.2e-08 63.5 58 58.6
RcHm_v2.0_Chr1g0373991 Rosa chinensis HOM05D002664 ORTHO05D002974 2.9e-08 63.2 74 45.9
Thecc.03G151700 Theobroma cacao HOM05D002664 ORTHO05D002974 2.9e-08 63.2 62 51.6
Sed0006781 Sechium edule HOM05D002664 ORTHO05D002974 3.8e-08 62.8 55 58.2
DCAR_009450 Daucus carota HOM05D002664 ORTHO05D002974 5.0e-08 62.4 69 50.7
vmacro06820 Vaccinium macrocarpon HOM05D002664 ORTHO05D002974 5.0e-08 62.4 71 49.3
MELO3C005824.2 Cucumis melo HOM05D002664 ORTHO05D002974 8.5e-08 61.6 76 51.3
CsaV3_5G001230 Cucumis sativus L. HOM05D002664 ORTHO05D002974 8.5e-08 61.6 76 51.3
QL09p019762 Quercus lobata HOM05D002664 ORTHO05D002974 1.1e-07 61.2 66 51.5
Cc02_g04490 Coffea canephora HOM05D002664 ORTHO05D002974 2.5e-07 60.1 82 45.1
COL.COLO4_14079 Corchorus olitorius HOM05D002664 ORTHO05D002974 2.5e-07 60.1 64 46.9
Ciclev10006805m.g Citrus clementina HOM05D002664 ORTHO05D002974 3.2e-07 59.7 61 45.9
CiPaw.03G093900 Carya illinoinensis HOM05D002664 ORTHO05D002974 5.5e-07 58.9 203 29.1
CDE04G2887 Ceratophyllum demersum HOM05D002664 ORTHO05D002974 5.5e-07 58.9 76 48.7
AUR62014362 Chenopodium quinoa HOM05D002664 ORTHO05D002974 9.4e-07 58.2 49 53.1
Sed0022620 Sechium edule HOM05D002664 ORTHO05D002974 1.2e-06 57.8 68 50.0
AUR62019103 Chenopodium quinoa HOM05D002664 ORTHO05D002974 1.6e-06 57.4 49 53.1
Phvul.011G181300 Phaseolus vulgaris HOM05D002664 ORTHO05D002974 1.6e-06 57.4 56 51.8
Potri.003G106800 Populus trichocarpa HOM05D002664 ORTHO05D002974 1.6e-06 57.4 66 47.0
TAR375G0876 Trochodendron aralioides HOM05D002664 ORTHO05D002974 1.6e-06 57.4 44 65.9
Aqoxy7G00809 Aquilegia oxysepala HOM05D002664 ORTHO05D002974 2.1e-06 57.0 144 36.8
Actinidia24983 Actinidia chinensis HOM05D002664 ORTHO05D002974 2.7e-06 56.6 40 67.5
Potri.001G126901 Populus trichocarpa HOM05D002664 ORTHO05D002974 4.7e-06 55.8 63 44.4
Sabra01G0097900 Salix brachista HOM05D002664 ORTHO05D002974 4.7e-06 55.8 65 46.2
EL10Ac1g00496 Beta vulgaris HOM05D002664 ORTHO05D002974 6.1e-06 55.5 50 52.0
Ah.02g111390 Amaranthus hybridus HOM05D002664 ORTHO05D002974 7.9e-06 55.1 45 55.6
Duzib084G0261 Durio zibethinus HOM05D002664 ORTHO05D002974 7.9e-06 55.1 55 45.5


User provided reference genes

Program Settings