Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 2.5e-47 191.8 101 100.0
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 2.3e-32 142.1 98 75.5
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.2e-30 135.6 95 71.6
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.2e-30 135.6 95 71.6
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 2.8e-30 135.2 92 76.1
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 4.8e-30 134.4 97 68.0
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 6.3e-30 134.0 95 69.5
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 6.3e-30 134.0 95 69.5
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 8.2e-30 133.7 97 68.0
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.1e-29 133.3 101 67.3
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 1.8e-29 132.5 99 69.7
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 3.1e-29 131.7 97 68.0
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 5.3e-29 131.0 90 72.2
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 9.0e-29 130.2 97 68.0
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 1.2e-28 129.8 99 69.7
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 2.0e-28 129.0 91 73.6
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 2.0e-28 129.0 97 69.1
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 2.6e-28 128.6 91 69.2
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 4.5e-28 127.9 99 67.7
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 7.7e-28 127.1 91 69.2
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 1.3e-27 126.3 90 70.0
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 2.2e-27 125.6 91 71.4
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 2.9e-27 125.2 87 73.6
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 3.8e-27 124.8 98 67.3
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.9e-26 122.5 89 69.7
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 2.5e-26 122.1 94 69.1
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.5e-26 122.1 89 69.7
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.5e-26 122.1 89 69.7
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 4.2e-26 121.3 94 67.0
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 9.4e-26 120.2 100 63.0
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 1.2e-25 119.8 95 68.4
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 1.6e-25 119.4 96 63.5
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.6e-25 119.4 91 67.0
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.1e-25 119.0 93 66.7
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 2.1e-25 119.0 87 70.1
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 2.7e-25 118.6 96 63.5
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 2.7e-25 118.6 91 69.2
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.7e-25 118.6 93 65.6
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.7e-25 118.6 93 65.6
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 3.6e-25 118.2 93 65.6
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.6e-25 118.2 93 65.6
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 3.6e-25 118.2 90 68.9
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 7.9e-25 117.1 98 61.2
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 7.9e-25 117.1 100 62.0
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 1.0e-24 116.7 88 67.0
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 1.4e-24 116.3 90 66.7
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 1.8e-24 115.9 83 71.1
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.8e-24 115.9 98 63.3
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 2.3e-24 115.5 96 61.5
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 3.0e-24 115.2 96 60.4
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 3.9e-24 114.8 100 62.0
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 5.1e-24 114.4 83 72.3
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 5.1e-24 114.4 99 59.6
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 6.7e-24 114.0 89 66.3
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 6.7e-24 114.0 91 67.0
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 8.8e-24 113.6 98 59.2
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.1e-23 113.2 93 61.3
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.5e-23 112.8 90 65.6
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.5e-23 112.8 90 63.3
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 1.5e-23 112.8 94 61.7
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 1.5e-23 112.8 101 60.4
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 2.5e-23 112.1 88 61.4
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 4.3e-23 111.3 96 59.4
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 5.7e-23 110.9 96 61.5
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 5.7e-23 110.9 96 61.5
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 5.7e-23 110.9 96 61.5
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 7.4e-23 110.5 96 61.5
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 7.4e-23 110.5 96 61.5
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 7.4e-23 110.5 91 63.7
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 9.7e-23 110.2 95 67.4
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 9.7e-23 110.2 96 59.4
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.7e-22 109.4 91 62.6
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.7e-22 109.4 91 63.7
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.7e-22 109.4 94 62.8
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 2.2e-22 109.0 96 60.4
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 2.2e-22 109.0 82 65.9
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 3.7e-22 108.2 96 60.4
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 3.7e-22 108.2 93 62.4
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 3.7e-22 108.2 92 55.4
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 8.2e-22 107.1 76 71.1
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 8.2e-22 107.1 80 70.0
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 8.2e-22 107.1 90 61.1
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.1e-21 106.7 76 71.1
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.4e-21 106.3 91 64.8
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 2.4e-21 105.5 101 62.4
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 3.1e-21 105.1 76 69.7
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 4.1e-21 104.8 100 55.0
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 4.1e-21 104.8 79 65.8
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 5.3e-21 104.4 90 61.1
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 6.9e-21 104.0 83 61.4
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 1.5e-20 102.8 98 53.1
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 2.0e-20 102.4 90 64.4
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 4.5e-20 101.3 77 67.5
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 1.0e-19 100.1 89 60.7
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 1.7e-19 99.4 88 65.9
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 2.2e-19 99.0 87 62.1
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 5.5e-18 94.4 92 57.6
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 2.2e-11 72.4 90 45.6
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 9.4e-10 67.0 58 58.6
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 1.5e-07 59.7 83 43.4
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 5.7e-07 57.8 42 69.0
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 1.3e-06 56.6 79 41.8


User provided reference genes

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