Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 0.0e+00 1392.5 731 100.0
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 5.7e-306 1053.9 733 77.5
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 3.3e-298 1028.1 734 75.9
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 3.8e-286 988.0 736 72.8
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 2.0e-279 965.7 733 71.6
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 1.9e-277 959.1 732 71.7
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 9.4e-277 956.8 733 72.0
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 9.7e-274 946.8 746 70.5
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 2.2e-273 945.7 737 70.8
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 3.5e-271 938.3 743 70.5
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 1.2e-268 929.9 745 70.2
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 3.6e-268 928.3 740 69.3
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 7.5e-266 920.6 742 69.3
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 3.1e-264 915.2 736 68.5
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 5.4e-264 914.4 732 67.1
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 2.7e-263 912.1 733 67.4
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 4.5e-263 911.4 732 68.6
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 7.7e-263 910.6 732 66.9
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 5.0e-262 907.9 732 67.1
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 1.5e-261 906.4 737 68.0
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 1.5e-261 906.4 733 67.3
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 3.2e-261 905.2 732 66.5
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 9.4e-261 903.7 732 69.4
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 1.2e-260 903.3 744 68.7
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.1e-260 902.5 732 69.3
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 3.6e-260 901.7 732 68.0
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 6.1e-260 901.0 732 67.1
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 8.0e-260 900.6 735 67.1
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 8.0e-260 900.6 732 69.0
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.8e-259 899.4 732 68.6
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 3.0e-259 898.7 734 66.9
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 3.0e-259 898.7 732 67.2
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 6.8e-259 897.5 732 68.4
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 8.8e-259 897.1 748 67.5
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 5.7e-258 894.4 732 66.9
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 2.2e-257 892.5 736 66.3
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.4e-256 889.8 735 66.4
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 5.9e-255 884.4 737 67.7
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.0e-254 883.6 735 67.9
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 4.3e-253 878.2 734 65.8
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 5.6e-253 877.9 744 67.1
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.4e-251 873.2 740 66.5
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 1.8e-251 872.8 732 66.1
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 6.8e-251 870.9 734 65.7
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 9.8e-250 867.1 739 63.6
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 7.0e-248 860.9 735 63.8
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 2.7e-247 859.0 735 65.7
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.6e-247 858.2 735 65.6
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 3.0e-246 855.5 954 55.3
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 6.6e-246 854.4 743 65.3
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.8e-244 849.0 732 64.8
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 6.2e-244 847.8 735 65.2
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.2e-242 843.6 732 64.5
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.2e-242 843.6 747 63.9
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 3.4e-242 842.0 821 59.3
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.7e-241 839.7 734 65.0
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 8.3e-241 837.4 650 70.2
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 1.9e-240 836.3 733 62.9
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.9e-240 836.3 732 63.9
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 1.9e-240 836.3 731 64.2
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 2.0e-239 832.8 751 63.6
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 2.3e-238 829.3 733 65.1
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 2.3e-238 829.3 735 63.9
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 1.1e-237 827.0 740 64.2
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.5e-237 826.6 740 63.5
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 2.1e-236 822.8 735 62.4
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 3.6e-236 822.0 739 62.9
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 6.2e-236 821.2 746 62.5
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 2.0e-234 816.2 736 63.9
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 5.8e-234 814.7 768 60.5
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 5.8e-234 814.7 740 63.8
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 2.9e-233 812.4 744 61.6
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 9.2e-232 807.4 941 53.3
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 1.6e-231 806.6 735 61.4
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 3.5e-231 805.4 742 62.4
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 3.6e-228 795.4 738 62.1
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 4.9e-225 785.0 742 61.7
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 1.1e-224 783.9 724 61.6
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 1.9e-224 783.1 729 61.3
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 3.2e-224 782.3 733 62.2
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 2.8e-220 769.2 597 70.2
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 2.7e-215 752.7 745 57.2
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 2.7e-215 752.7 749 57.0
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 1.1e-213 747.3 745 56.6
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 5.6e-213 745.0 741 57.5
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 1.8e-211 740.0 790 55.3
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 3.1e-211 739.2 748 57.0
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 1.6e-207 726.9 748 56.6
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 2.7e-207 726.1 761 57.6
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 2.0e-202 709.9 742 55.7
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 2.6e-202 709.5 742 55.4
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 7.6e-202 708.0 742 55.5
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 2.2e-201 706.4 743 55.5
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 7.1e-200 701.4 742 54.6
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 5.1e-198 695.3 766 53.8
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 6.7e-198 694.9 595 66.6
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 3.3e-197 692.6 598 63.5
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.6e-196 690.3 629 59.9
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 3.7e-196 689.1 559 67.3
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 7.1e-192 674.9 637 59.0
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 7.4e-181 638.3 541 63.8
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 3.7e-180 636.0 730 52.7
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 7.4e-173 611.7 618 59.1
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 5.3e-163 578.9 604 55.0
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 1.3e-148 531.2 538 58.2
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 3.6e-135 486.5 782 41.9
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 1.3e-129 468.0 802 39.5
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 1.4e-110 404.8 738 36.7
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.1e-110 403.7 450 51.6
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 1.7e-108 397.9 293 72.4
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 6.9e-102 375.9 278 71.2
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 2.0e-101 374.4 470 51.9
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 2.7e-82 310.8 438 46.1
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.1e-71 274.6 317 52.4
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 2.4e-62 244.6 181 68.5
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.3e-60 238.8 195 64.6
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 9.1e-54 216.1 371 40.7
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 6.1e-50 203.4 309 42.4
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 6.7e-49 199.9 154 66.2
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 2.0e-45 188.3 164 68.3
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 1.0e-36 159.5 137 73.0
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 1.3e-36 159.1 107 79.4
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.3e-36 159.1 95 82.1
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 4.7e-34 150.6 144 66.0
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.5e-32 145.6 137 64.2
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 3.1e-30 137.9 114 64.9
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 8.0e-26 123.2 155 47.7
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 2.8e-23 114.8 146 52.7
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.3e-15 89.4 63 74.6
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 5.4e-06 57.4 35 80.0


User provided reference genes

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