Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g01002_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D011352 3.9e-59 231.5 135 100.0
MBI06_g17104_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 4.3e-42 174.9 126 78.6
Migut.E00229 Erythranthe guttata HOM05D000196 ORTHO05D000279 6.0e-12 74.7 73 58.9
Potri.008G181000 Populus trichocarpa HOM05D000196 ORTHO05D000279 1.3e-11 73.6 48 81.2
Rhsim12G0107500 Rhododendron simsii HOM05D000196 ORTHO05D000279 1.8e-11 73.2 59 67.8
Cpa.g.sc86.17 Carica papaya HOM05D000196 ORTHO05D000279 2.3e-11 72.8 52 75.0
Hma1.2p1_0079F.1_g041490 Hydrangea macrophylla HOM05D000196 ORTHO05D000279 2.3e-11 72.8 45 82.2
MD16G1108400 Malus domestica HOM05D000196 ORTHO05D000279 2.3e-11 72.8 52 73.1
unitig_52.g17187 Utricularia gibba HOM05D000196 ORTHO05D000279 2.3e-11 72.8 45 77.8
Atru.chr11.2213 Acer truncatum HOM05D000196 ORTHO05D000279 3.0e-11 72.4 59 67.8
Hund25428 Selenicereus undatus HOM05D000196 ORTHO05D000279 3.0e-11 72.4 52 73.1
Actinidia24569 Actinidia chinensis HOM05D000196 ORTHO05D000279 3.9e-11 72.0 57 66.7
Aqoxy3G01383 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 5.1e-11 71.6 47 78.7
arahy.Tifrunner.gnm1.ann1.Q3RA0M Arachis hypogaea HOM05D000196 ORTHO05D000279 5.1e-11 71.6 52 71.2
arahy.Tifrunner.gnm1.ann1.UG2HRK Arachis hypogaea HOM05D000196 ORTHO05D000279 5.1e-11 71.6 52 71.2
HanXRQChr17g0569261 Helianthus annuus HOM05D000196 ORTHO05D000279 5.1e-11 71.6 64 62.5
Sabra10G0017400 Salix brachista HOM05D000196 ORTHO05D000279 5.1e-11 71.6 48 79.2
CiPaw.06G063800 Carya illinoinensis HOM05D000196 ORTHO05D000279 6.7e-11 71.2 41 87.8
Dinv11016 Davidia involucrata HOM05D000196 ORTHO05D000279 6.7e-11 71.2 45 82.2
Eucgr.H04693 Eucalyptus grandis HOM05D000196 ORTHO05D000279 6.7e-11 71.2 48 75.0
ECA234G3615 Erigeron canadensis HOM05D000196 ORTHO05D000279 8.7e-11 70.9 64 60.9
Lsat_1_v5_gn_4_2361 Lactuca sativa HOM05D000196 ORTHO05D000279 8.7e-11 70.9 64 62.5
PGR119G0160 Punica granatum HOM05D000196 ORTHO05D000279 8.7e-11 70.9 41 85.4
CAN.G49.15 Capsicum annuum HOM05D000196 ORTHO05D000279 1.1e-10 70.5 47 72.3
Lj6A819T61 Lonicera japonica HOM05D000196 ORTHO05D000279 1.1e-10 70.5 57 68.4
Solyc05g014260.3 Solanum lycopersicum HOM05D000196 ORTHO05D000279 1.1e-10 70.5 51 72.5
Sopen05g009290 Solanum pennellii HOM05D000196 ORTHO05D000279 1.1e-10 70.5 51 72.5
GSVIVG01007550001 Vitis vinifera HOM05D000196 ORTHO05D000279 1.1e-10 70.5 45 82.2
DCAR_031176 Daucus carota HOM05D000196 ORTHO05D000279 1.5e-10 70.1 57 68.4
Nitab4.5_0001318g0010 Nicotiana tabacum HOM05D000196 ORTHO05D000279 1.5e-10 70.1 51 72.5
Hund06054 Selenicereus undatus HOM05D000196 ORTHO05D000279 1.5e-10 70.1 52 75.0
TAR629G3003 Trochodendron aralioides HOM05D000196 ORTHO05D000279 1.5e-10 70.1 45 80.0
CiPaw.05G175000 Carya illinoinensis HOM05D000196 ORTHO05D000279 1.9e-10 69.7 41 85.4
Haze_12315 Corylus avellana HOM05D000196 ORTHO05D000279 1.9e-10 69.7 39 89.7
Duzib248G0389 Durio zibethinus HOM05D000196 ORTHO05D000279 1.9e-10 69.7 52 73.1
FAN07G0840 Fragaria x ananassa HOM05D000196 ORTHO05D000279 1.9e-10 69.7 45 80.0
Nitab4.5_0000041g0320 Nicotiana tabacum HOM05D000196 ORTHO05D000279 1.9e-10 69.7 51 72.5
Prupe.1G238200 Prunus persica HOM05D000196 ORTHO05D000279 1.9e-10 69.7 41 85.4
RcHm_v2.0_Chr4g0431941 Rosa chinensis HOM05D000196 ORTHO05D000279 1.9e-10 69.7 41 85.4
TAR626G0189 Trochodendron aralioides HOM05D000196 ORTHO05D000279 1.9e-10 69.7 57 66.7
FvH4_4g24870 Fragaria vesca HOM05D000196 ORTHO05D000279 2.5e-10 69.3 45 80.0
FAN12G1578 Fragaria x ananassa HOM05D000196 ORTHO05D000279 2.5e-10 69.3 45 80.0
FAN17G0435 Fragaria x ananassa HOM05D000196 ORTHO05D000279 2.5e-10 69.3 45 80.0
FAN22G0298 Fragaria x ananassa HOM05D000196 ORTHO05D000279 2.5e-10 69.3 45 80.0
PSO017G0209 Papaver somniferum HOM05D000196 ORTHO05D000279 2.5e-10 69.3 51 68.6
PSO478G3674 Papaver somniferum HOM05D000196 ORTHO05D000279 2.5e-10 69.3 51 68.6
PGSC0003DMG400011980 Solanum tuberosum HOM05D000196 ORTHO05D000279 2.5e-10 69.3 41 82.9
arahy.Tifrunner.gnm1.ann1.HUN5XX Arachis hypogaea HOM05D000196 ORTHO05D000279 3.3e-10 68.9 55 63.6
COL.COLO4_23562 Corchorus olitorius HOM05D000196 ORTHO05D000279 3.3e-10 68.9 48 77.1
Thecc.02G270100 Theobroma cacao HOM05D000196 ORTHO05D000279 3.3e-10 68.9 48 77.1
TPR.G35826 Trifolium pratense HOM05D000196 ORTHO05D000279 3.3e-10 68.9 53 62.3
unitig_62.g23659 Utricularia gibba HOM05D000196 ORTHO05D000279 3.3e-10 68.9 55 63.6
MSTRG.13330 Avicennia marina HOM05D000196 ORTHO05D000279 4.3e-10 68.6 41 82.9
MSTRG.2447 Avicennia marina HOM05D000196 ORTHO05D000279 4.3e-10 68.6 41 82.9
AUR62005550 Chenopodium quinoa HOM05D000196 ORTHO05D000279 4.3e-10 68.6 41 82.9
AUR62024182 Chenopodium quinoa HOM05D000196 ORTHO05D000279 4.3e-10 68.6 41 82.9
Eucgr.H04694 Eucalyptus grandis HOM05D000196 ORTHO05D000279 4.3e-10 68.6 48 70.8
Gohir.A03G130500 Gossypium hirsutum HOM05D000196 ORTHO05D000279 4.3e-10 68.6 41 82.9
MD00G1165700 Malus domestica HOM05D000196 ORTHO05D000279 4.3e-10 68.6 41 82.9
MD13G1108300 Malus domestica HOM05D000196 ORTHO05D000279 4.3e-10 68.6 41 82.9
Phvul.002G177100 Phaseolus vulgaris HOM05D000196 ORTHO05D000279 4.3e-10 68.6 51 68.6
SalBow8G5050 Salvia bowleyana HOM05D000196 ORTHO05D000279 4.3e-10 68.6 57 66.7
SGA_v2.0_scaffold87G27116 Striga asiatica HOM05D000196 ORTHO05D000279 4.3e-10 68.6 47 76.6
TWI36G1368 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 4.3e-10 68.6 52 69.2
VMungo0251G2092 Vigna mungo HOM05D000196 ORTHO05D000279 4.3e-10 68.6 61 59.0
EL10As2g23241 Beta vulgaris HOM05D000196 ORTHO05D000279 5.6e-10 68.2 41 82.9
Gohir.D02G154200 Gossypium hirsutum HOM05D000196 ORTHO05D000279 5.6e-10 68.2 45 77.8
Gorai.005G173300 Gossypium raimondii HOM05D000196 ORTHO05D000279 5.6e-10 68.2 45 77.8
Lalb_Chr07g0187181 Lupinus albus HOM05D000196 ORTHO05D000279 5.6e-10 68.2 59 59.3
Nn3g16584 Nelumbo nucifera HOM05D000196 ORTHO05D000279 5.6e-10 68.2 45 77.8
Ciclev10031052m.g Citrus clementina HOM05D000196 ORTHO05D000279 7.4e-10 67.8 41 80.5
Glyma.05G144500 Glycine max HOM05D000196 ORTHO05D000279 7.4e-10 67.8 61 59.0
vmacro16150 Vaccinium macrocarpon HOM05D000196 ORTHO05D000279 7.4e-10 67.8 39 84.6
Glyma.11G246400 Glycine max HOM05D000196 ORTHO05D000279 9.6e-10 67.4 47 74.5
Medtr3g086100 Medicago truncatula HOM05D000196 ORTHO05D000279 9.6e-10 67.4 47 74.5
Psat5g093760 Pisum sativum HOM05D000196 ORTHO05D000279 9.6e-10 67.4 51 68.6
VMungo1383G3410 Vigna mungo HOM05D000196 ORTHO05D000279 9.6e-10 67.4 47 74.5
ClCG08G017460 Citrullus lanatus HOM05D000196 ORTHO05D000279 1.3e-09 67.0 52 67.3
MELO3C010714.2 Cucumis melo HOM05D000196 ORTHO05D000279 1.3e-09 67.0 52 67.3
DCAR_024076 Daucus carota HOM05D000196 ORTHO05D045083 1.3e-09 67.0 57 59.6
Lj6g0022104 Lotus japonicus HOM05D000196 ORTHO05D000279 1.3e-09 67.0 47 72.3
CSS0017468 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 1.6e-09 66.6 51 66.7
CSS0037737 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 1.6e-09 66.6 51 66.7
CANSAT01G1507 Cannabis sativa HOM05D000196 ORTHO05D000279 1.6e-09 66.6 41 78.0
Nn4g22467 Nelumbo nucifera HOM05D000196 ORTHO05D000279 1.6e-09 66.6 39 84.6
Ca_16497_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 2.1e-09 66.2 51 68.6
Duzib251G0258 Durio zibethinus HOM05D000196 ORTHO05D000279 2.1e-09 66.2 39 84.6
Glyma.18G010800 Glycine max HOM05D000196 ORTHO05D000279 2.1e-09 66.2 47 72.3
CsaV3_2G025170 Cucumis sativus L. HOM05D000196 ORTHO05D000279 2.8e-09 65.9 52 67.3
Lalb_Chr11g0075631 Lupinus albus HOM05D000196 ORTHO05D000279 3.7e-09 65.5 45 73.3
Aqoxy5G03591 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 4.8e-09 65.1 40 77.5
Peaxi162Scf00128g00723 Petunia axillaris HOM05D000196 ORTHO05D000279 4.8e-09 65.1 48 68.8
TPR.G33365 Trifolium pratense HOM05D000196 ORTHO05D000279 4.8e-09 65.1 47 72.3
TAR371G0147 Trochodendron aralioides HOM05D000196 ORTHO05D000279 4.8e-09 65.1 48 70.8
GSVIVG01010300001 Vitis vinifera HOM05D000196 ORTHO05D000279 4.8e-09 65.1 38 81.6
CSS0013426 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 6.2e-09 64.7 50 66.0
CSS0039789 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 6.2e-09 64.7 50 66.0
Oeu009368.2 Olea europaea HOM05D000196 ORTHO05D000279 6.2e-09 64.7 40 80.0
Sc04g0009850 Simmondsia chinensis HOM05D000196 ORTHO05D000279 6.2e-09 64.7 35 85.7
Ah.02g130490 Amaranthus hybridus HOM05D000196 ORTHO05D000279 1.1e-08 63.9 55 65.5
CDE02G1485 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 1.4e-08 63.5 34 85.3
A07p32440 Brassica napus HOM05D000196 ORTHO05D000279 1.8e-08 63.2 34 88.2
C06p38470 Brassica napus HOM05D000196 ORTHO05D000279 1.8e-08 63.2 34 88.2
BolC6t38944H Brassica oleracea HOM05D000196 ORTHO05D000279 1.8e-08 63.2 34 88.2
Sed0005457 Sechium edule HOM05D000196 ORTHO05D000279 1.8e-08 63.2 50 64.0
Medtr8g079940 Medicago truncatula HOM05D000196 ORTHO05D000279 2.4e-08 62.8 49 65.3
Sc14g0008940 Simmondsia chinensis HOM05D000196 ORTHO05D000279 2.4e-08 62.8 33 87.9
TAR622G0963 Trochodendron aralioides HOM05D000196 ORTHO05D000279 2.4e-08 62.8 38 78.9
PSO063G0256 Papaver somniferum HOM05D000196 ORTHO05D000279 4.0e-08 62.0 50 66.0
unitig_21.g20397 Utricularia gibba HOM05D000196 ORTHO05D000279 4.0e-08 62.0 32 90.6
PSO782G0367 Papaver somniferum HOM05D000196 ORTHO05D000279 9.0e-08 60.8 50 64.0
ATR0824G208 Amborella trichopoda HOM05D000196 ORTHO05D000279 1.2e-07 60.5 35 80.0
Os01g0904700 Oryza sativa ssp. japonica HOM05D000196 ORTHO05D000279 1.2e-07 60.5 33 84.8
Zm00001eb144290 Zea mays HOM05D000196 ORTHO05D000279 1.2e-07 60.5 33 84.8
SGA_v2.0_scaffold332G48953 Striga asiatica HOM05D003409 ORTHO05D011352 1.5e-07 60.1 36 80.6
AL2G26410 Arabidopsis lyrata HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
BcaB03g15174 Brassica carinata HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
BcaC08g46044 Brassica carinata HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
BcaC08g46188 Brassica carinata HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
A07p34210 Brassica napus HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
C06p42360 Brassica napus HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
BolC6t39194H Brassica oleracea HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
BraA07t30868Z Brassica rapa HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
BraA07t31050Z Brassica rapa HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
Carub.0002s1414 Capsella rubella HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
CARHR060300 Cardamine hirsuta HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
Thhalv10018396m.g Eutrema salsugineum HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
Sp5g22700 Schrenkiella parvula HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
THA.LOC104809797 Tarenaya hassleriana HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
THA.LOC104821316 Tarenaya hassleriana HOM05D000196 ORTHO05D000279 2.6e-07 59.3 31 90.3
Manes.12G017600 Manihot esculenta HOM05D000196 ORTHO05D000279 3.4e-07 58.9 38 76.3
Ciclev10005747m.g Citrus clementina HOM05D000196 ORTHO05D000279 4.5e-07 58.5 39 69.2
Duzib251G0540 Durio zibethinus HOM05D000196 ORTHO05D000279 4.5e-07 58.5 82 46.3
Aa31LG4G12110 Aethionema arabicum HOM05D000196 ORTHO05D000279 5.8e-07 58.2 31 87.1
MSTRG.21782 Avicennia marina HOM05D000196 ORTHO05D000279 5.8e-07 58.2 55 60.0
DCAR_027029 Daucus carota HOM05D000196 ORTHO05D000279 1.3e-06 57.0 50 60.0
TPR.G16842 Trifolium pratense HOM05D000196 ORTHO05D000279 1.7e-06 56.6 51 56.9
Lsat_1_v5_gn_8_35440 Lactuca sativa HOM05D000196 ORTHO05D000279 2.2e-06 56.2 40 62.5
PGR031G0356 Punica granatum HOM05D000196 ORTHO05D000279 2.2e-06 56.2 35 77.1
FvH4_4g19230 Fragaria vesca HOM05D000196 ORTHO05D000279 2.9e-06 55.8 52 55.8
FAN07G0014 Fragaria x ananassa HOM05D000196 ORTHO05D000279 2.9e-06 55.8 52 55.8
FAN07G0978 Fragaria x ananassa HOM05D000196 ORTHO05D000279 2.9e-06 55.8 52 55.8
FAN12G2663 Fragaria x ananassa HOM05D000196 ORTHO05D000279 2.9e-06 55.8 52 55.8
Sc14g0008920 Simmondsia chinensis HOM05D000196 ORTHO05D000279 2.9e-06 55.8 35 71.4
Solyc05g054390.4 Solanum lycopersicum HOM05D000196 ORTHO05D000279 2.9e-06 55.8 39 66.7
Sopen05g032870 Solanum pennellii HOM05D000196 ORTHO05D000279 2.9e-06 55.8 39 66.7
ECA233G4052 Erigeron canadensis HOM05D000196 ORTHO05D000279 3.8e-06 55.5 32 84.4
HanXRQChr13g0394431 Helianthus annuus HOM05D000196 ORTHO05D000279 3.8e-06 55.5 32 84.4
ATR0118G029 Amborella trichopoda HOM05D000196 ORTHO05D000279 4.9e-06 55.1 52 51.9
Aqoxy3G00009 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 4.9e-06 55.1 61 47.5
Dinv07718 Davidia involucrata HOM05D000196 ORTHO05D000279 4.9e-06 55.1 60 51.7
FAN12G1485 Fragaria x ananassa HOM05D000196 ORTHO05D000279 4.9e-06 55.1 52 55.8
Gohir.D02G139900 Gossypium hirsutum HOM05D000196 ORTHO05D000279 4.9e-06 55.1 57 50.9
Lsat_1_v5_gn_1_44261 Lactuca sativa HOM05D000196 ORTHO05D000279 4.9e-06 55.1 34 76.5
Lsat_1_v5_gn_6_19461 Lactuca sativa HOM05D000196 ORTHO05D000279 4.9e-06 55.1 34 76.5
Sabra08G0103500 Salix brachista HOM05D000196 ORTHO05D000279 4.9e-06 55.1 62 48.4
unitig_26.g10580 Utricularia gibba HOM05D000196 ORTHO05D000279 4.9e-06 55.1 52 55.8
VMungo1215G0460 Vigna mungo HOM05D000196 ORTHO05D000279 4.9e-06 55.1 52 57.7
Ca_21462_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 6.5e-06 54.7 39 69.2
Nitab4.5_0002803g0020 Nicotiana tabacum HOM05D000196 ORTHO05D000279 6.5e-06 54.7 50 50.0
Peaxi162Scf00102g00116 Petunia axillaris HOM05D000196 ORTHO05D000279 6.5e-06 54.7 37 67.6
PGSC0003DMG400023534 Solanum tuberosum HOM05D000196 ORTHO05D000279 6.5e-06 54.7 39 66.7
Atru.chr11.908 Acer truncatum HOM05D000196 ORTHO05D000279 8.4e-06 54.3 59 52.5
Actinidia12399 Actinidia chinensis HOM05D000196 ORTHO05D000279 8.4e-06 54.3 65 47.7
CSS0043810 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 8.4e-06 54.3 59 52.5
Gorai.002G029200 Gossypium raimondii HOM05D000196 ORTHO05D000279 8.4e-06 54.3 52 57.7
HanXRQChr02g0049071 Helianthus annuus HOM05D000196 ORTHO05D000279 8.4e-06 54.3 32 81.2
Lj6C684T1 Lonicera japonica HOM05D000196 ORTHO05D000279 8.4e-06 54.3 34 79.4
MBI18_g05907_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 8.4e-06 54.3 50 60.0
MCO04G379 Micromonas commoda HOM05D000196 ORTHO05D000279 8.4e-06 54.3 39 64.1
Oeu016476.1 Olea europaea HOM05D000196 ORTHO05D000279 8.4e-06 54.3 35 74.3
Psat0s1646g0080 Pisum sativum HOM05D000196 ORTHO05D000279 8.4e-06 54.3 35 74.3
Sopen01g026880 Solanum pennellii HOM05D000196 ORTHO05D000279 8.4e-06 54.3 35 74.3
SGA_v2.0_scaffold119G32695 Striga asiatica HOM05D000196 ORTHO05D000279 8.4e-06 54.3 35 74.3
SGA_v2.0_scaffold444G51719 Striga asiatica HOM05D000196 ORTHO05D000279 8.4e-06 54.3 35 74.3
SGA_v2.0_scaffold91G28046 Striga asiatica HOM05D000196 ORTHO05D000279 8.4e-06 54.3 35 74.3
HPP92_020308 Vanilla planifolia HOM05D000196 ORTHO05D000279 8.4e-06 54.3 34 76.5


User provided reference genes

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