Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g47467_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 3.4e-127 458.4 234 100.0
MBI16_g22910_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 9.2e-109 397.1 252 84.1
MBI15_g26747_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 1.1e-106 390.2 233 88.4
MBI10_g18940_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 1.3e-94 350.1 259 74.9
MBI18_g31614_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 3.9e-91 338.6 218 83.5
MBI05_g47552_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 5.6e-90 334.7 236 78.0
MBI05_g08208_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 2.4e-88 329.3 229 78.6
TAR633G1583 Trochodendron aralioides HOM05D004163 ORTHO05D004882 4.5e-55 218.8 256 53.5
TAR362G1211 Trochodendron aralioides HOM05D004163 ORTHO05D004882 8.5e-54 214.5 258 53.1
Solyc09g061310.3 Solanum lycopersicum HOM05D004163 ORTHO05D004882 3.2e-53 212.6 253 52.2
Actinidia30080 Actinidia chinensis HOM05D004163 ORTHO05D004882 2.1e-52 209.9 250 52.0
Duzib133G0118 Durio zibethinus HOM05D004163 ORTHO05D004882 2.1e-52 209.9 255 49.4
Nn3g19955 Nelumbo nucifera HOM05D004163 ORTHO05D004882 2.7e-52 209.5 252 52.4
PGSC0003DMG400017659 Solanum tuberosum HOM05D004163 ORTHO05D004882 4.6e-52 208.8 253 51.8
Actinidia37588 Actinidia chinensis HOM05D004163 ORTHO05D004882 6.1e-52 208.4 250 52.8
Sopen09g024070 Solanum pennellii HOM05D004163 ORTHO05D004882 6.1e-52 208.4 253 51.8
Nn1g07844 Nelumbo nucifera HOM05D004163 ORTHO05D004882 7.9e-52 208.0 252 54.4
QL09p054666 Quercus lobata HOM05D004163 ORTHO05D004882 7.9e-52 208.0 249 51.4
Psat3g145080 Pisum sativum HOM05D004163 ORTHO05D004882 1.0e-51 207.6 250 52.0
Atru.chr5.2002 Acer truncatum HOM05D004163 ORTHO05D004882 2.3e-51 206.5 251 52.2
Duzib138G0078 Durio zibethinus HOM05D004163 ORTHO05D004882 1.9e-50 203.4 256 49.6
Gohir.D11G143700 Gossypium hirsutum HOM05D004163 ORTHO05D004882 2.5e-50 203.0 253 51.4
Gohir.A11G137300 Gossypium hirsutum HOM05D004163 ORTHO05D004882 3.3e-50 202.6 253 51.4
HanXRQChr10g0279771 Helianthus annuus HOM05D004163 ORTHO05D004882 4.3e-50 202.2 248 51.2
Dinv19207 Davidia involucrata HOM05D004163 ORTHO05D004882 5.7e-50 201.8 250 50.4
Gohir.D08G212000 Gossypium hirsutum HOM05D004163 ORTHO05D004882 5.7e-50 201.8 254 50.0
Cc01_g17110 Coffea canephora HOM05D004163 ORTHO05D004882 7.4e-50 201.4 251 50.2
COL.COLO4_08179 Corchorus olitorius HOM05D004163 ORTHO05D004882 7.4e-50 201.4 252 50.8
Gorai.004G225400 Gossypium raimondii HOM05D004163 ORTHO05D004882 9.7e-50 201.1 254 50.0
Medtr7g058510 Medicago truncatula HOM05D004163 ORTHO05D004882 9.7e-50 201.1 250 51.2
Rhsim13G0044700 Rhododendron simsii HOM05D004163 ORTHO05D004882 1.3e-49 200.7 250 49.2
SGA_v2.0_scaffold1G00744 Striga asiatica HOM05D004163 ORTHO05D004882 1.3e-49 200.7 248 51.6
Gohir.A08G194200 Gossypium hirsutum HOM05D004163 ORTHO05D004882 2.2e-49 199.9 254 49.6
RcHm_v2.0_Chr6g0284951 Rosa chinensis HOM05D004163 ORTHO05D004882 6.3e-49 198.4 254 48.8
Nitab4.5_0000045g0110 Nicotiana tabacum HOM05D004163 ORTHO05D004882 8.2e-49 198.0 253 50.2
GSVIVG01028648001 Vitis vinifera HOM05D004163 ORTHO05D004882 1.1e-48 197.6 258 47.7
AUR62008905 Chenopodium quinoa HOM05D004163 ORTHO05D004882 1.8e-48 196.8 252 48.8
Ca_07522_v3 Cicer arietinum L. HOM05D004163 ORTHO05D004882 1.8e-48 196.8 250 50.4
Nitab4.5_0006192g0030 Nicotiana tabacum HOM05D004163 ORTHO05D004882 1.8e-48 196.8 252 49.2
Cpa.g.sc8.162 Carica papaya HOM05D004163 ORTHO05D004882 2.4e-48 196.4 252 48.4
Lj2A1132G68 Lonicera japonica HOM05D004163 ORTHO05D004882 3.1e-48 196.1 250 48.4
CAN.G154.3 Capsicum annuum HOM05D004163 ORTHO05D004882 4.1e-48 195.7 253 49.8
HanXRQChr15g0468291 Helianthus annuus HOM05D004163 ORTHO05D004882 4.1e-48 195.7 248 50.4
Aqoxy2G03890 Aquilegia oxysepala HOM05D004163 ORTHO05D004882 5.3e-48 195.3 249 49.8
EL10Ac7g17826 Beta vulgaris HOM05D004163 ORTHO05D004882 5.3e-48 195.3 225 51.1
vmacro02754 Vaccinium macrocarpon HOM05D004163 ORTHO05D004882 9.1e-48 194.5 252 50.0
Eucgr.K02178 Eucalyptus grandis HOM05D004163 ORTHO05D004882 1.2e-47 194.1 253 50.2
CiPaw.03G150300 Carya illinoinensis HOM05D004163 ORTHO05D004882 1.5e-47 193.7 256 50.0
Migut.D00532 Erythranthe guttata HOM05D004163 ORTHO05D004882 1.5e-47 193.7 249 49.0
FvH4_4g33290 Fragaria vesca HOM05D004163 ORTHO05D004882 2.0e-47 193.4 254 47.6
CANSAT01G0846 Cannabis sativa HOM05D004163 ORTHO05D004882 2.6e-47 193.0 249 51.0
Ciclev10021450m.g Citrus clementina HOM05D004163 ORTHO05D004882 2.6e-47 193.0 255 47.8
vmacro14756 Vaccinium macrocarpon HOM05D004163 ORTHO05D004882 2.6e-47 193.0 254 48.0
Manes.12G047002 Manihot esculenta HOM05D004163 ORTHO05D004882 3.4e-47 192.6 254 46.9
TWI36G1488 Tripterygium wilfordii HOM05D004163 ORTHO05D004882 3.4e-47 192.6 256 47.3
arahy.Tifrunner.gnm1.ann1.IH4GAK Arachis hypogaea HOM05D004163 ORTHO05D004882 4.5e-47 192.2 249 48.6
arahy.Tifrunner.gnm1.ann1.PP5Q2Q Arachis hypogaea HOM05D004163 ORTHO05D004882 4.5e-47 192.2 251 47.8
FAN27G1937 Fragaria x ananassa HOM05D004163 ORTHO05D004882 5.9e-47 191.8 253 47.4
Phvul.008G125200 Phaseolus vulgaris HOM05D004163 ORTHO05D004882 5.9e-47 191.8 251 49.0
Thecc.01G226700 Theobroma cacao HOM05D004163 ORTHO05D004882 5.9e-47 191.8 258 46.1
Eucgr.K02173 Eucalyptus grandis HOM05D004163 ORTHO05D004882 7.7e-47 191.4 254 48.8
TPR.G9029 Trifolium pratense HOM05D004163 ORTHO05D004882 7.7e-47 191.4 250 48.4
MSTRG.21422 Avicennia marina HOM05D004163 ORTHO05D004882 1.0e-46 191.0 249 51.0
Gorai.007G153900 Gossypium raimondii HOM05D004163 ORTHO05D004882 1.7e-46 190.3 253 48.6
MD10G1165200 Malus domestica HOM05D004163 ORTHO05D004882 1.7e-46 190.3 255 49.8
Potri.002G241700 Populus trichocarpa HOM05D004163 ORTHO05D004882 2.2e-46 189.9 253 49.4
CiPaw.04G105700 Carya illinoinensis HOM05D004163 ORTHO05D004882 2.9e-46 189.5 254 47.2
ECA247G0816 Erigeron canadensis HOM05D004163 ORTHO05D004882 2.9e-46 189.5 249 49.0
PSO832G2991 Papaver somniferum HOM05D004163 ORTHO05D004882 2.9e-46 189.5 250 50.0
Prupe.8G203600 Prunus persica HOM05D004163 ORTHO05D004882 2.9e-46 189.5 246 51.2
FAN15G0391 Fragaria x ananassa HOM05D004163 ORTHO05D004882 3.8e-46 189.1 254 46.9
Manes.13G045400 Manihot esculenta HOM05D004163 ORTHO05D004882 3.8e-46 189.1 255 47.8
VMungo1383G2575 Vigna mungo HOM05D004163 ORTHO05D004882 8.5e-46 188.0 251 47.8
Peaxi162Scf00107g01625 Petunia axillaris HOM05D004163 ORTHO05D004882 1.1e-45 187.6 253 50.2
TWI18G0775 Tripterygium wilfordii HOM05D004163 ORTHO05D004882 1.4e-45 187.2 255 46.3
MD05G1176500 Malus domestica HOM05D004163 ORTHO05D004882 1.9e-45 186.8 254 48.0
PSO339G4819 Papaver somniferum HOM05D004163 ORTHO05D004882 2.5e-45 186.4 250 49.2
Glyma.18G170900 Glycine max HOM05D004163 ORTHO05D004882 3.2e-45 186.0 251 48.2
PSO339G2763 Papaver somniferum HOM05D004163 ORTHO05D004882 3.2e-45 186.0 250 49.2
CsaV3_7G025890 Cucumis sativus L. HOM05D004163 ORTHO05D004882 4.2e-45 185.7 250 46.8
Glyma.08G354700 Glycine max HOM05D004163 ORTHO05D004882 4.2e-45 185.7 251 47.4
Sc24g0003580 Simmondsia chinensis HOM05D004163 ORTHO05D004882 5.5e-45 185.3 212 52.8
THA.LOC104822505 Tarenaya hassleriana HOM05D004163 ORTHO05D004882 5.5e-45 185.3 250 49.2
ClCG09G009070 Citrullus lanatus HOM05D004163 ORTHO05D004882 7.2e-45 184.9 250 48.4
Sabra02G0184100 Salix brachista HOM05D004163 ORTHO05D004882 9.4e-45 184.5 258 48.4
Lalb_Chr03g0041791 Lupinus albus HOM05D004163 ORTHO05D004882 2.1e-44 183.3 250 47.2
CDE02G0060 Ceratophyllum demersum HOM05D004163 ORTHO05D004882 2.7e-44 183.0 250 48.8
Hma1.2p1_0970F.1_g242660 Hydrangea macrophylla HOM05D004163 ORTHO05D004882 3.6e-44 182.6 251 47.8
MELO3C021008.2 Cucumis melo HOM05D004163 ORTHO05D004882 4.6e-44 182.2 228 49.6
Lj1g0012524 Lotus japonicus HOM05D004163 ORTHO05D004882 4.6e-44 182.2 250 46.8
Hund05534 Selenicereus undatus HOM05D004163 ORTHO05D004882 6.1e-44 181.8 251 46.6
Hund05538 Selenicereus undatus HOM05D004163 ORTHO05D004882 6.1e-44 181.8 251 46.6
Thhalv10021308m.g Eutrema salsugineum HOM05D004163 ORTHO05D004882 1.0e-43 181.0 251 45.8
Lsat_1_v5_gn_9_12141 Lactuca sativa HOM05D004163 ORTHO05D004882 1.0e-43 181.0 248 46.0
PSO675G2819 Papaver somniferum HOM05D004163 ORTHO05D004882 1.0e-43 181.0 247 47.4
PGR044G0385 Punica granatum HOM05D004163 ORTHO05D004882 1.8e-43 180.3 250 45.2
MSTRG.17551 Avicennia marina HOM05D004163 ORTHO05D004882 3.0e-43 179.5 251 49.4
Carub.0003s0660 Capsella rubella HOM05D004163 ORTHO05D004882 3.9e-43 179.1 250 45.6
Lalb_Chr01g0022371 Lupinus albus HOM05D004163 ORTHO05D004882 5.1e-43 178.7 250 47.6
Aa31sc164G40 Aethionema arabicum HOM05D004163 ORTHO05D004882 1.5e-42 177.2 250 47.6
AT3G07090 Arabidopsis thaliana HOM05D004163 ORTHO05D004882 2.0e-42 176.8 250 46.8
CSS0045261 Camellia sinensis var. sinensis HOM05D004163 ORTHO05D004882 2.0e-42 176.8 234 48.3
CSS0028699 Camellia sinensis var. sinensis HOM05D004163 ORTHO05D004882 2.6e-42 176.4 234 48.7
ATR0736G127 Amborella trichopoda HOM05D004163 ORTHO05D004882 4.4e-42 175.6 250 46.4
AL3G18320 Arabidopsis lyrata HOM05D004163 ORTHO05D004882 9.7e-42 174.5 250 46.4
BcaC05g29756 Brassica carinata HOM05D004163 ORTHO05D004882 9.7e-42 174.5 250 46.8
Aa31LG5G17650 Aethionema arabicum HOM05D004163 ORTHO05D004882 1.7e-41 173.7 250 44.4
Sp3g06030 Schrenkiella parvula HOM05D004163 ORTHO05D004882 1.7e-41 173.7 250 46.0
BcaB04g21311 Brassica carinata HOM05D004163 ORTHO05D004882 2.2e-41 173.3 249 44.2
C05p60290 Brassica napus HOM05D001545 ORTHO05D001600 3.7e-41 172.6 249 46.2
A05p41110 Brassica napus HOM05D004163 ORTHO05D004882 4.8e-41 172.2 250 44.8
BolC5t34677H Brassica oleracea HOM05D001545 ORTHO05D001600 4.8e-41 172.2 250 46.0
BraA05t22837Z Brassica rapa HOM05D001545 ORTHO05D001600 4.8e-41 172.2 250 44.8
Sed0004920 Sechium edule HOM05D004163 ORTHO05D004882 4.8e-41 172.2 251 45.4
BcaC05g29838 Brassica carinata HOM05D004163 ORTHO05D004882 6.3e-41 171.8 249 46.2
BcaC09g47939 Brassica carinata HOM05D004163 ORTHO05D004882 6.3e-41 171.8 251 44.6
BolC1t05569H Brassica oleracea HOM05D001545 ORTHO05D001600 6.3e-41 171.8 251 44.6
AUR62031805 Chenopodium quinoa HOM05D004163 ORTHO05D004882 1.4e-40 170.6 252 45.6
BNapus_Darmor_BZH_scaffold_109p00240 Brassica napus HOM05D001545 ORTHO05D001600 5.3e-40 168.7 250 43.6
BraA01t04398Z Brassica rapa HOM05D004163 ORTHO05D004882 6.9e-40 168.3 250 43.2
HPP92_008969 Vanilla planifolia HOM05D004163 ORTHO05D004882 1.5e-39 167.2 252 45.6
Os10g0472400 Oryza sativa ssp. japonica HOM05D004163 ORTHO05D004882 2.0e-39 166.8 267 41.6
unitig_22.g6322 Utricularia gibba HOM05D004163 ORTHO05D004882 2.0e-39 166.8 247 44.1
AagrBONN_evm.TU.Sc2ySwM_117.3750 Anthoceros agrestis HOM05D004163 ORTHO05D004882 5.9e-39 165.2 248 44.8
Sed0020546 Sechium edule HOM05D004163 ORTHO05D004882 5.9e-39 165.2 250 43.6
CARHR081680 Cardamine hirsuta HOM05D004163 ORTHO05D004882 1.7e-38 163.7 251 45.4
DCAR_012637 Daucus carota HOM05D004163 ORTHO05D004882 2.2e-38 163.3 248 44.4
Lsat_1_v5_gn_5_180180 Lactuca sativa HOM05D004163 ORTHO05D004882 1.4e-37 160.6 228 43.9
Os02g0814000 Oryza sativa ssp. japonica HOM05D004163 ORTHO05D004882 1.2e-36 157.5 250 42.8
DCAR_000532 Daucus carota HOM05D004163 ORTHO05D004882 1.6e-36 157.1 220 46.4
Zm00001eb258670 Zea mays HOM05D004163 ORTHO05D004882 1.6e-36 157.1 248 42.3
BcaB04g21309 Brassica carinata HOM05D004163 ORTHO05D004882 3.0e-35 152.9 249 41.4
Zm00001eb221910 Zea mays HOM05D004163 ORTHO05D004882 2.2e-33 146.7 257 42.4
MELO3C026664.2 Cucumis melo HOM05D004163 ORTHO05D004882 1.1e-32 144.4 222 43.2
Pp3c14_10250 Physcomitrium patens HOM05D004163 ORTHO05D004882 2.4e-32 143.3 277 39.0
CsaV3_3G029920 Cucumis sativus L. HOM05D004163 ORTHO05D004882 5.3e-32 142.1 251 39.4
ECA236G3105 Erigeron canadensis HOM05D004163 ORTHO05D004882 7.0e-32 141.7 249 37.8
SMO146G0295 Selaginella moellendorffii HOM05D004163 ORTHO05D004882 7.0e-32 141.7 224 42.9
ClCG07G001940 Citrullus lanatus HOM05D004163 ORTHO05D004882 3.5e-31 139.4 250 39.6
Lsat_1_v5_gn_8_90020 Lactuca sativa HOM05D004163 ORTHO05D004882 1.7e-30 137.1 237 38.8
Mapoly0051s0047 Marchantia polymorpha HOM05D004163 ORTHO05D004882 6.5e-30 135.2 244 39.3
HanXRQChr10g0287331 Helianthus annuus HOM05D004163 ORTHO05D004882 8.0e-28 128.3 249 37.3
HanXRQChr04g0110741 Helianthus annuus HOM05D004163 ORTHO05D004882 5.2e-27 125.6 249 35.7
CBR_g567 Chara braunii HOM05D004163 ORTHO05D004882 4.4e-26 122.5 316 33.5
MD05G1176100 Malus domestica HOM05D004163 ORTHO05D004882 5.7e-26 122.1 119 56.3
Cpa.g.sc997.5 Carica papaya HOM05D004163 ORTHO05D004882 1.8e-24 117.1 253 37.5
SHI28736 Sapria himalayana HOM05D004163 ORTHO05D004882 1.4e-19 100.9 83 59.0
SMO173G0033 Selaginella moellendorffii HOM05D004163 ORTHO05D004882 1.8e-19 100.5 68 69.1
MCO11G711 Micromonas commoda HOM05D004163 ORTHO05D004882 2.3e-19 100.1 97 51.5
Haze_24789 Corylus avellana HOM05D004163 ORTHO05D004882 4.0e-19 99.4 171 43.3
Pp3c11_1330 Physcomitrium patens HOM05D004163 ORTHO05D004882 8.8e-19 98.2 114 45.6
C07p12700 Brassica napus HOM05D004163 ORTHO05D004882 3.5e-15 86.3 114 44.7
C07p01630 Brassica napus HOM05D004163 ORTHO05D004882 8.6e-14 81.6 198 36.4
Peaxi162Scf00517g00519 Petunia axillaris HOM05D004163 ORTHO05D004882 1.9e-13 80.5 178 37.6
Lsat_1_v5_gn_9_120120 Lactuca sativa HOM05D004163 ORTHO05D004882 3.2e-13 79.7 56 71.4
Peaxi162Scf00107g01626 Petunia axillaris HOM05D004163 ORTHO05D004882 3.2e-13 79.7 150 39.3
PRCOL_00000114 Prasinoderma coloniale HOM05D004163 ORTHO05D004882 1.2e-12 77.8 95 40.0
C07p01970 Brassica napus HOM05D004163 ORTHO05D004882 2.1e-12 77.0 113 40.7
CDE01G0537 Ceratophyllum demersum HOM05D004163 ORTHO05D004882 6.1e-12 75.5 64 60.9
BcaC06g35635 Brassica carinata HOM05D004163 ORTHO05D004882 1.4e-11 74.3 225 32.0
Cfa025778 Carpinus fangiana HOM05D004163 ORTHO05D004882 1.2e-10 71.2 111 35.1
Hma1.2p1_0812F.1_g222380 Hydrangea macrophylla HOM05D004163 ORTHO05D004882 2.6e-10 70.1 142 40.1
Cre12.g555850 Chlamydomonas reinhardtii HOM05D004163 ORTHO05D004882 1.4e-08 64.3 95 30.5
BcaC06g36633 Brassica carinata HOM05D004163 ORTHO05D004882 1.2e-07 61.2 151 35.1
SHI28738 Sapria himalayana HOM05D004163 ORTHO05D004882 1.0e-06 58.2 176 31.2


User provided reference genes

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