Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g47217_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 6.6e-41 170.2 85 100.0
MBI05_g21529_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 1.0e-33 146.4 85 88.2
MBI05_g45675_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 1.0e-33 146.4 85 88.2
MBI05_g48036_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 3.0e-33 144.8 85 87.1
MBI05_g31849_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 5.6e-32 140.6 85 85.9
MBI05_g47220_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 2.4e-30 135.2 86 83.7
MBI09_g32117_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 1.7e-12 75.9 85 51.8
MBI09_g39819_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 1.7e-12 75.9 85 51.8
TAR376G1243 Trochodendron aralioides HOM05D000180 ORTHO05D000099 1.9e-11 72.4 88 47.7
PSO675G0648 Papaver somniferum HOM05D000180 ORTHO05D000099 4.2e-11 71.2 85 42.4
PSO541G0888 Papaver somniferum HOM05D000180 ORTHO05D000099 5.5e-11 70.9 85 43.5
TAR376G1055 Trochodendron aralioides HOM05D000180 ORTHO05D000099 7.2e-11 70.5 88 46.6
Aqoxy4G01479 Aquilegia oxysepala HOM05D000180 ORTHO05D000099 2.1e-10 68.9 83 44.6
Aqoxy4G01478 Aquilegia oxysepala HOM05D000180 ORTHO05D000099 3.6e-10 68.2 67 43.3
QL11p048553 Quercus lobata HOM05D000180 ORTHO05D000099 3.6e-10 68.2 73 46.6
Aqoxy4G01092 Aquilegia oxysepala HOM05D000180 ORTHO05D000099 6.1e-10 67.4 87 42.5
Gorai.002G003700 Gossypium raimondii HOM05D000018 ORTHO05D001172 3.9e-09 64.7 73 43.8
Gohir.D01G003000 Gossypium hirsutum HOM05D000018 ORTHO05D001172 5.1e-09 64.3 73 43.8
QL11p049132 Quercus lobata HOM05D000180 ORTHO05D000099 6.7e-09 63.9 73 45.2
Eucgr.G00281 Eucalyptus grandis HOM05D000180 ORTHO05D000099 1.1e-08 63.2 67 44.8
Gohir.A01G003332 Gossypium hirsutum HOM05D000180 ORTHO05D000099 1.1e-08 63.2 73 43.8
TAR376G1062 Trochodendron aralioides HOM05D000180 ORTHO05D000099 1.5e-08 62.8 71 45.1
CSS0032670 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 1.9e-08 62.4 66 43.9
Sabra06G0150000 Salix brachista HOM05D000180 ORTHO05D000099 2.5e-08 62.0 72 51.4
vmacro02260 Vaccinium macrocarpon HOM05D000180 ORTHO05D000099 4.3e-08 61.2 73 41.1
Haze_02185 Corylus avellana HOM05D000180 ORTHO05D000099 5.7e-08 60.8 71 40.8
Thecc.02G064700 Theobroma cacao HOM05D000180 ORTHO05D000099 7.4e-08 60.5 72 40.3
Cfa005210 Carpinus fangiana HOM05D000180 ORTHO05D000099 9.7e-08 60.1 76 39.5
PGR142G2425 Punica granatum HOM05D000180 ORTHO05D000099 9.7e-08 60.1 74 40.5
Thecc.02G064600 Theobroma cacao HOM05D000180 ORTHO05D000099 9.7e-08 60.1 72 41.7
TAR536G0012 Trochodendron aralioides HOM05D000180 ORTHO05D000099 9.7e-08 60.1 48 58.3
TAR536G0017 Trochodendron aralioides HOM05D000180 ORTHO05D000099 9.7e-08 60.1 50 58.0
vmacro23210 Vaccinium macrocarpon HOM05D000180 ORTHO05D000099 9.7e-08 60.1 68 38.2
Dinv04955 Davidia involucrata HOM05D000180 ORTHO05D000099 1.3e-07 59.7 67 44.8
Eucgr.G00300 Eucalyptus grandis HOM05D000180 ORTHO05D000099 1.3e-07 59.7 85 42.4
Eucgr.A02219 Eucalyptus grandis HOM05D000180 ORTHO05D000099 1.7e-07 59.3 85 40.0
CSS0048755 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 2.2e-07 58.9 74 41.9
CiPaw.06G124500 Carya illinoinensis HOM05D000180 ORTHO05D000099 2.2e-07 58.9 84 45.2
AUR62010076 Chenopodium quinoa HOM05D000180 ORTHO05D000099 2.2e-07 58.9 86 40.7
Eucgr.G00279 Eucalyptus grandis HOM05D000180 ORTHO05D000099 2.2e-07 58.9 85 38.8
Peaxi162Scf00042g02729 Petunia axillaris HOM05D000180 ORTHO05D000099 2.2e-07 58.9 82 37.8
PGR142G1063 Punica granatum HOM05D000180 ORTHO05D000099 2.2e-07 58.9 83 39.8
Sopen10g025010 Solanum pennellii HOM05D000180 ORTHO05D000099 2.2e-07 58.9 87 39.1
CSS0025951 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 2.8e-07 58.5 74 40.5
Eucgr.L02111 Eucalyptus grandis HOM05D000180 ORTHO05D000099 2.8e-07 58.5 72 40.3
AUR62013069 Chenopodium quinoa HOM05D000180 ORTHO05D000099 3.7e-07 58.2 86 39.5
Cc02_g35990 Coffea canephora HOM05D000180 ORTHO05D000099 3.7e-07 58.2 71 43.7
COL.COLO4_17288 Corchorus olitorius HOM05D000180 ORTHO05D000099 3.7e-07 58.2 85 38.8
TWI79G1353 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 3.7e-07 58.2 72 45.8
HanXRQChr10g0295391 Helianthus annuus HOM05D000180 ORTHO05D000099 4.8e-07 57.8 56 48.2
PGR142G1045 Punica granatum HOM05D000180 ORTHO05D000099 4.8e-07 57.8 74 39.2
Rhsim06G0222200 Rhododendron simsii HOM05D000180 ORTHO05D000099 4.8e-07 57.8 72 41.7
arahy.Tifrunner.gnm1.ann1.6RWN9U Arachis hypogaea HOM05D000180 ORTHO05D000099 6.3e-07 57.4 51 56.9
Rhsim11G0190000 Rhododendron simsii HOM05D000180 ORTHO05D000099 6.3e-07 57.4 66 40.9
RcHm_v2.0_Chr6g0244581 Rosa chinensis HOM05D000180 ORTHO05D000099 6.3e-07 57.4 85 40.0
arahy.Tifrunner.gnm1.ann1.627UR1 Arachis hypogaea HOM05D000180 ORTHO05D000099 8.2e-07 57.0 51 56.9
arahy.Tifrunner.gnm1.ann1.DZA1VM Arachis hypogaea HOM05D000180 ORTHO05D000099 8.2e-07 57.0 51 56.9
arahy.Tifrunner.gnm1.ann1.SCSZ0G Arachis hypogaea HOM05D000180 ORTHO05D000099 8.2e-07 57.0 51 56.9
Lj9C390T8 Lonicera japonica HOM05D000180 ORTHO05D000099 8.2e-07 57.0 69 43.5
Nitab4.5_0008316g0020 Nicotiana tabacum HOM05D000180 ORTHO05D000099 8.2e-07 57.0 73 41.1
QL07p024903 Quercus lobata HOM05D000180 ORTHO05D000099 8.2e-07 57.0 38 65.8
Solyc10g055197.1 Solanum lycopersicum HOM05D000180 ORTHO05D000099 8.2e-07 57.0 87 39.1
Manes.11G082700 Manihot esculenta HOM05D000180 ORTHO05D000099 1.1e-06 56.6 86 39.5
Dinv04956 Davidia involucrata HOM05D000180 ORTHO05D000099 1.4e-06 56.2 67 43.3
QL07p024911 Quercus lobata HOM05D000180 ORTHO05D000099 1.4e-06 56.2 38 65.8
arahy.Tifrunner.gnm1.ann1.PR32JD Arachis hypogaea HOM05D000180 ORTHO05D000099 1.8e-06 55.8 36 69.4
CSS0028211 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 1.8e-06 55.8 36 69.4
CSS0043959 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 1.8e-06 55.8 83 38.6
CSS0044221 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 1.8e-06 55.8 36 69.4
Cc04_g12510 Coffea canephora HOM05D000180 ORTHO05D000099 1.8e-06 55.8 70 41.4
ATR0563G001 Amborella trichopoda HOM05D000180 ORTHO05D000099 2.4e-06 55.5 40 57.5
arahy.Tifrunner.gnm1.ann1.K5B2IJ Arachis hypogaea HOM05D000180 ORTHO05D000099 2.4e-06 55.5 51 54.9
PSO541G0114 Papaver somniferum HOM05D000180 ORTHO05D000099 2.4e-06 55.5 71 36.6
Peaxi162Scf00042g02728 Petunia axillaris HOM05D000180 ORTHO05D000099 2.4e-06 55.5 70 40.0
Rhsim11G0189900 Rhododendron simsii HOM05D000180 ORTHO05D000099 2.4e-06 55.5 60 43.3
Sc08g0003120 Simmondsia chinensis HOM05D000180 ORTHO05D000099 2.4e-06 55.5 79 41.8
Thecc.05G177100 Theobroma cacao HOM05D000180 ORTHO05D000099 2.4e-06 55.5 37 67.6
VMungo1383G1090 Vigna mungo HOM05D000180 ORTHO05D000099 2.4e-06 55.5 39 61.5
CAN.G143.32 Capsicum annuum HOM05D000180 ORTHO05D000099 3.1e-06 55.1 64 40.6
COL.COLO4_29382 Corchorus olitorius HOM05D000180 ORTHO05D000099 3.1e-06 55.1 37 64.9
Peaxi162Scf00071g00068 Petunia axillaris HOM05D000180 ORTHO05D000099 3.1e-06 55.1 44 52.3
Atru.chr5.3249 Acer truncatum HOM05D000180 ORTHO05D000099 4.1e-06 54.7 78 41.0
ATR0272G001 Amborella trichopoda HOM05D000180 ORTHO05D000099 4.1e-06 54.7 65 52.3
ATR0738G001 Amborella trichopoda HOM05D000180 ORTHO05D000099 4.1e-06 54.7 65 52.3
ATR0810G154 Amborella trichopoda HOM05D000180 ORTHO05D000099 4.1e-06 54.7 41 51.2
ATR0810G290 Amborella trichopoda HOM05D000180 ORTHO05D000099 4.1e-06 54.7 65 52.3
CAN.G143.31 Capsicum annuum HOM05D000180 ORTHO05D000099 4.1e-06 54.7 64 40.6
Duzib052G0799 Durio zibethinus HOM05D000180 ORTHO05D000099 4.1e-06 54.7 67 44.8
Lju124C23T15 Lonicera japonica HOM05D000180 ORTHO05D000099 4.1e-06 54.7 38 63.2
Nitab4.5_0000956g0090 Nicotiana tabacum HOM05D000180 ORTHO05D000099 4.1e-06 54.7 80 35.0
PSO675G3710 Papaver somniferum HOM05D000180 ORTHO05D000099 4.1e-06 54.7 71 36.6
Potri.016G060700 Populus trichocarpa HOM05D000180 ORTHO05D000099 4.1e-06 54.7 69 46.4
QL07p024822 Quercus lobata HOM05D000180 ORTHO05D000099 4.1e-06 54.7 37 67.6
Sopen07g021940 Solanum pennellii HOM05D000180 ORTHO05D000099 4.1e-06 54.7 74 43.2
PGSC0003DMG400021947 Solanum tuberosum HOM05D000180 ORTHO05D000099 4.1e-06 54.7 72 43.1
GSVIVG01033451001 Vitis vinifera HOM05D000180 ORTHO05D000099 4.1e-06 54.7 38 63.2
ATR0734G001 Amborella trichopoda HOM05D000180 ORTHO05D000099 5.3e-06 54.3 46 58.7
CiPaw.05G078700 Carya illinoinensis HOM05D000180 ORTHO05D000099 5.3e-06 54.3 87 40.2
COL.COLO4_29384 Corchorus olitorius HOM05D000180 ORTHO05D000099 5.3e-06 54.3 50 54.0
DCAR_013666 Daucus carota HOM05D000180 ORTHO05D000099 5.3e-06 54.3 47 57.4
DCAR_017038 Daucus carota HOM05D000180 ORTHO05D000099 5.3e-06 54.3 39 61.5
Dinv04957 Davidia involucrata HOM05D000180 ORTHO05D000099 5.3e-06 54.3 65 38.5
Thecc.05G177400 Theobroma cacao HOM05D000180 ORTHO05D000099 5.3e-06 54.3 37 67.6
TWI53G1771 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 5.3e-06 54.3 65 43.1
vmacro02262 Vaccinium macrocarpon HOM05D000180 ORTHO05D000099 5.3e-06 54.3 48 47.9
Cc08_g03560 Coffea canephora HOM05D000180 ORTHO05D000099 6.9e-06 53.9 72 36.1
DCAR_017037 Daucus carota HOM05D000180 ORTHO05D000099 6.9e-06 53.9 39 61.5
Peaxi162Scf00042g00274 Petunia axillaris HOM05D000180 ORTHO05D000099 6.9e-06 53.9 68 41.2
Sc08g0003100 Simmondsia chinensis HOM05D000180 ORTHO05D000099 6.9e-06 53.9 68 41.2
Solyc07g042300.1 Solanum lycopersicum HOM05D000180 ORTHO05D000099 6.9e-06 53.9 38 57.9
BcaB08g34961 Brassica carinata HOM05D000180 ORTHO05D000099 9.1e-06 53.5 51 49.0
A09p58530 Brassica napus HOM05D000180 ORTHO05D000099 9.1e-06 53.5 51 49.0
BraA09t41240Z Brassica rapa HOM05D000180 ORTHO05D000003 9.1e-06 53.5 51 49.0
CSS0006406 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 9.1e-06 53.5 67 32.8
Eucgr.A02477 Eucalyptus grandis HOM05D000180 ORTHO05D000099 9.1e-06 53.5 37 62.2
FvH4_2g01690 Fragaria vesca HOM05D000180 ORTHO05D000099 9.1e-06 53.5 77 42.9
Nitab4.5_0003262g0010 Nicotiana tabacum HOM05D000180 ORTHO05D000099 9.1e-06 53.5 38 55.3
Peaxi162Scf00684g00015 Petunia axillaris HOM05D000180 ORTHO05D000099 9.1e-06 53.5 73 43.8
Phvul.001G145000 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 9.1e-06 53.5 37 62.2
Phvul.001G145100 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 9.1e-06 53.5 37 62.2
Phvul.001G145200 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 9.1e-06 53.5 37 62.2
Phvul.001G145300 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 9.1e-06 53.5 49 53.1
PGR004G0343 Punica granatum HOM05D000180 ORTHO05D000099 9.1e-06 53.5 38 63.2
Rhsim03G0004000 Rhododendron simsii HOM05D000180 ORTHO05D000099 9.1e-06 53.5 36 66.7


User provided reference genes

Program Settings