Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g43548_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 7.0e-107 390.6 191 100.0
MBI04_g20667_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 3.1e-54 215.7 210 55.7
MBI04_g20665_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 1.9e-35 153.3 144 53.5
MBI04_g20664_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 1.6e-34 150.2 140 54.3
MBI04_g20669_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 1.1e-27 127.5 130 48.5
MBI01_g01232_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 1.2e-21 107.5 124 41.1
TAR374G1240 Trochodendron aralioides HOM05D001961 ORTHO05D002286 2.0e-21 106.7 130 40.0
Aqoxy3G03236 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 4.5e-21 105.5 146 36.3
Dinv19903 Davidia involucrata HOM05D001961 ORTHO05D002286 1.0e-20 104.4 128 38.3
Nn3g17102 Nelumbo nucifera HOM05D001961 ORTHO05D002286 1.0e-20 104.4 130 38.5
PSO210G7105 Papaver somniferum HOM05D001961 ORTHO05D002286 1.0e-20 104.4 130 37.7
Peaxi162Scf00689g00564 Petunia axillaris HOM05D001961 ORTHO05D002286 1.3e-20 104.0 129 37.2
Phvul.003G194200 Phaseolus vulgaris HOM05D001961 ORTHO05D002286 2.2e-20 103.2 132 38.6
arahy.Tifrunner.gnm1.ann1.DV6TYS Arachis hypogaea HOM05D001961 ORTHO05D002286 3.8e-20 102.4 122 40.2
arahy.Tifrunner.gnm1.ann1.LMB17M Arachis hypogaea HOM05D001961 ORTHO05D002286 3.8e-20 102.4 122 40.2
Nitab4.5_0000909g0070 Nicotiana tabacum HOM05D001961 ORTHO05D002286 3.8e-20 102.4 129 38.0
Nn4g23006 Nelumbo nucifera HOM05D001961 ORTHO05D002286 6.5e-20 101.7 130 36.9
PSO161G0075 Papaver somniferum HOM05D001961 ORTHO05D002286 6.5e-20 101.7 130 36.9
PSO591G0439 Papaver somniferum HOM05D001961 ORTHO05D002286 6.5e-20 101.7 124 39.5
Atru.chr9.2337 Acer truncatum HOM05D001961 ORTHO05D002286 8.5e-20 101.3 132 40.2
Nitab4.5_0000003g0050 Nicotiana tabacum HOM05D001961 ORTHO05D002286 1.9e-19 100.1 129 36.4
VMungo1215G0372 Vigna mungo HOM05D001961 ORTHO05D002286 1.9e-19 100.1 128 38.3
CSS0045618 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 2.5e-19 99.8 122 36.9
Glyma.05G031000 Glycine max HOM05D001961 ORTHO05D002286 2.5e-19 99.8 131 38.2
Glyma.17G095800 Glycine max HOM05D001961 ORTHO05D002286 2.5e-19 99.8 128 38.3
PSO478G4671 Papaver somniferum HOM05D001961 ORTHO05D002286 2.5e-19 99.8 130 37.7
PSO832G1192 Papaver somniferum HOM05D001961 ORTHO05D002286 2.5e-19 99.8 124 39.5
Lalb_Chr13g0298141 Lupinus albus HOM05D001961 ORTHO05D002286 3.2e-19 99.4 124 37.1
GSVIVG01008079001 Vitis vinifera HOM05D001961 ORTHO05D002286 3.2e-19 99.4 123 40.7
Ciclev10018472m.g Citrus clementina HOM05D001961 ORTHO05D002286 4.2e-19 99.0 125 40.0
Prupe.5G184600 Prunus persica HOM05D001961 ORTHO05D002286 4.2e-19 99.0 122 39.3
Cfa019014 Carpinus fangiana HOM05D001961 ORTHO05D002286 5.5e-19 98.6 128 39.1
CSS0014551 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 9.4e-19 97.8 122 36.1
Cpa.g.sc17.186 Carica papaya HOM05D001961 ORTHO05D002286 9.4e-19 97.8 122 37.7
Lj4g0028007 Lotus japonicus HOM05D001961 ORTHO05D002286 9.4e-19 97.8 130 36.2
Potri.012G071900 Populus trichocarpa HOM05D001961 ORTHO05D002286 9.4e-19 97.8 122 37.7
Manes.06G097300 Manihot esculenta HOM05D001961 ORTHO05D002286 1.2e-18 97.4 123 36.6
CARHR156620 Cardamine hirsuta HOM05D001961 ORTHO05D002286 1.6e-18 97.1 122 37.7
Gohir.A03G064400 Gossypium hirsutum HOM05D001961 ORTHO05D002286 2.1e-18 96.7 122 37.7
Sp5g14040 Schrenkiella parvula HOM05D001961 ORTHO05D002286 2.7e-18 96.3 124 37.9
CARHR156630 Cardamine hirsuta HOM05D001961 ORTHO05D002286 3.6e-18 95.9 122 36.9
Thhalv10010060m.g Eutrema salsugineum HOM05D001961 ORTHO05D002286 3.6e-18 95.9 122 36.9
Lj9C457G12 Lonicera japonica HOM05D001961 ORTHO05D002286 3.6e-18 95.9 130 36.2
Rhsim08G0161300 Rhododendron simsii HOM05D001961 ORTHO05D002286 3.6e-18 95.9 127 36.2
COL.COLO4_35465 Corchorus olitorius HOM05D001961 ORTHO05D002286 4.7e-18 95.5 132 34.8
Haze_07394 Corylus avellana HOM05D001961 ORTHO05D002286 4.7e-18 95.5 128 37.5
MD14G1192000 Malus domestica HOM05D001961 ORTHO05D002286 4.7e-18 95.5 120 40.0
Dinv38651 Davidia involucrata HOM05D001961 ORTHO05D002286 6.1e-18 95.1 128 35.2
Gorai.003G070500 Gossypium raimondii HOM05D001961 ORTHO05D002286 6.1e-18 95.1 122 37.7
MD06G1185800 Malus domestica HOM05D001961 ORTHO05D002286 6.1e-18 95.1 122 39.3
AL5G27220 Arabidopsis lyrata HOM05D001961 ORTHO05D002286 8.0e-18 94.7 122 36.1
Gohir.D03G090700 Gossypium hirsutum HOM05D001961 ORTHO05D002286 8.0e-18 94.7 122 37.7
Lj5C117T8 Lonicera japonica HOM05D001961 ORTHO05D002286 8.0e-18 94.7 122 36.9
FvH4_5g15740 Fragaria vesca HOM05D001961 ORTHO05D002286 1.0e-17 94.4 127 36.2
FAN18G4418 Fragaria x ananassa HOM05D001961 ORTHO05D002286 1.0e-17 94.4 127 36.2
Lalb_Chr12g0201211 Lupinus albus HOM05D001961 ORTHO05D002286 1.0e-17 94.4 124 36.3
RcHm_v2.0_Chr7g0180371 Rosa chinensis HOM05D001961 ORTHO05D002286 1.0e-17 94.4 120 39.2
vmacro19421 Vaccinium macrocarpon HOM05D001961 ORTHO05D002286 1.0e-17 94.4 128 35.9
CDE07G1845 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 1.4e-17 94.0 132 34.8
FAN08G2604 Fragaria x ananassa HOM05D001961 ORTHO05D002286 1.4e-17 94.0 127 36.2
Sabra12G0051100 Salix brachista HOM05D001961 ORTHO05D002286 1.8e-17 93.6 122 37.7
Actinidia34975 Actinidia chinensis HOM05D001961 ORTHO05D002286 2.3e-17 93.2 122 35.2
FAN04G1134 Fragaria x ananassa HOM05D001961 ORTHO05D002286 2.3e-17 93.2 127 36.2
Potri.015G066500 Populus trichocarpa HOM05D001961 ORTHO05D002286 3.0e-17 92.8 119 37.0
Thecc.03G077100 Theobroma cacao HOM05D001961 ORTHO05D002286 3.0e-17 92.8 127 36.2
Carub.0005s1403 Capsella rubella HOM05D001961 ORTHO05D002286 4.0e-17 92.4 134 33.6
Eucgr.B00398 Eucalyptus grandis HOM05D001961 ORTHO05D002286 4.0e-17 92.4 132 36.4
FAN13G0464 Fragaria x ananassa HOM05D001961 ORTHO05D002286 4.0e-17 92.4 127 36.2
Manes.14G073702 Manihot esculenta HOM05D001961 ORTHO05D002286 4.0e-17 92.4 120 38.3
A06p19750 Brassica napus HOM05D001961 ORTHO05D002286 5.2e-17 92.0 122 36.1
BraA06t25054Z Brassica rapa HOM05D001961 ORTHO05D002286 5.2e-17 92.0 122 36.1
Carub.0005s1404 Capsella rubella HOM05D001961 ORTHO05D002286 5.2e-17 92.0 134 31.3
Hma1.2p1_0104F.1_g050400 Hydrangea macrophylla HOM05D001961 ORTHO05D002286 5.2e-17 92.0 130 34.6
Lsat_1_v5_gn_5_18460 Lactuca sativa HOM05D001961 ORTHO05D002286 6.7e-17 91.7 118 38.1
Sp5g14050 Schrenkiella parvula HOM05D001961 ORTHO05D002286 8.8e-17 91.3 124 37.1
BraA06t25050Z Brassica rapa HOM05D001961 ORTHO05D002286 1.2e-16 90.9 122 36.1
CDE06G2189 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 1.2e-16 90.9 132 33.3
AT3G47890 Arabidopsis thaliana HOM05D001961 ORTHO05D002286 1.5e-16 90.5 124 34.7
BcaC01g01759 Brassica carinata HOM05D001961 ORTHO05D002286 1.5e-16 90.5 121 35.5
BcaC01g01766 Brassica carinata HOM05D001961 ORTHO05D002286 1.5e-16 90.5 121 35.5
C03p72190 Brassica napus HOM05D001961 ORTHO05D002286 1.5e-16 90.5 121 35.5
BolC3t19515H Brassica oleracea HOM05D001961 ORTHO05D002286 1.5e-16 90.5 121 35.5
Actinidia37665 Actinidia chinensis HOM05D001961 ORTHO05D002286 2.0e-16 90.1 128 35.2
Sc04g0002330 Simmondsia chinensis HOM05D001961 ORTHO05D002286 2.0e-16 90.1 124 33.1
Thhalv10010059m.g Eutrema salsugineum HOM05D001961 ORTHO05D002286 2.6e-16 89.7 122 36.1
TAR622G0827 Trochodendron aralioides HOM05D001961 ORTHO05D002286 2.6e-16 89.7 130 36.9
Aa31LG4G16560 Aethionema arabicum HOM05D001961 ORTHO05D002286 5.7e-16 88.6 132 32.6
Duzib068G1318 Durio zibethinus HOM05D001961 ORTHO05D002286 9.7e-16 87.8 122 33.6
Gohir.A11G028810 Gossypium hirsutum HOM05D001961 ORTHO05D002286 1.3e-15 87.4 120 35.0
TWI15G0443 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 1.7e-15 87.0 128 31.2
Duzib205G1945 Durio zibethinus HOM05D001961 ORTHO05D002286 2.2e-15 86.7 127 33.1
TWI81G0197 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 2.2e-15 86.7 128 32.8
TWI60G1556 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 2.8e-15 86.3 128 32.8
Ca_21858_v3 Cicer arietinum L. HOM05D001961 ORTHO05D002286 3.7e-15 85.9 127 35.4
Lsat_1_v5_gn_1_11560 Lactuca sativa HOM05D001961 ORTHO05D002286 3.7e-15 85.9 121 34.7
Sabra15G0091600 Salix brachista HOM05D001961 ORTHO05D002286 3.7e-15 85.9 119 35.3
Medtr4g107470 Medicago truncatula HOM05D001961 ORTHO05D002286 4.8e-15 85.5 127 33.1
MSTRG.11404 Avicennia marina HOM05D001961 ORTHO05D002286 8.2e-15 84.7 129 31.8
Gohir.D11G032100 Gossypium hirsutum HOM05D001961 ORTHO05D002286 8.2e-15 84.7 120 34.2
Gorai.007G034900 Gossypium raimondii HOM05D001961 ORTHO05D002286 8.2e-15 84.7 120 34.2
Oeu022619.1 Olea europaea HOM05D001961 ORTHO05D002286 8.2e-15 84.7 137 33.6
PGR083G2262 Punica granatum HOM05D001961 ORTHO05D002286 1.1e-14 84.3 122 36.1
THA.LOC104821450 Tarenaya hassleriana HOM05D001961 ORTHO05D002286 1.1e-14 84.3 122 34.4
Aa31LG11G1000 Aethionema arabicum HOM05D001961 ORTHO05D002286 1.4e-14 84.0 131 30.5
MELO3C017148.2 Cucumis melo HOM05D001961 ORTHO05D002286 1.8e-14 83.6 121 37.2
DCAR_026083 Daucus carota HOM05D001961 ORTHO05D002286 1.8e-14 83.6 136 31.6
HanXRQChr05g0155261 Helianthus annuus HOM05D001961 ORTHO05D002286 1.8e-14 83.6 160 30.6
CsaV3_1G002070 Cucumis sativus L. HOM05D001961 ORTHO05D002286 2.4e-14 83.2 121 37.2
Dinv33700 Davidia involucrata HOM05D001961 ORTHO05D002286 3.1e-14 82.8 128 30.5
Cc04_g15870 Coffea canephora HOM05D001961 ORTHO05D002286 4.1e-14 82.4 120 35.8
SGA_v2.0_scaffold114G31883 Striga asiatica HOM05D001961 ORTHO05D002286 9.1e-14 81.3 121 33.9
Aqoxy4G02906 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 1.2e-13 80.9 122 37.7
TPR.G38388 Trifolium pratense HOM05D001961 ORTHO05D002286 1.2e-13 80.9 124 33.1
Oeu022639.1 Olea europaea HOM05D001961 ORTHO05D002286 1.6e-13 80.5 139 32.4
EL10Ac5g10921 Beta vulgaris HOM05D001961 ORTHO05D002286 2.0e-13 80.1 131 31.3
CSS0004686 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 2.7e-13 79.7 140 30.7
BcaB02g10685 Brassica carinata HOM05D001961 ORTHO05D002286 3.5e-13 79.3 122 33.6
Haze_05897 Corylus avellana HOM05D001961 ORTHO05D002286 3.5e-13 79.3 124 35.5
Hma1.2p1_0002F.1_g003390 Hydrangea macrophylla HOM05D001961 ORTHO05D002286 3.5e-13 79.3 130 31.5
AUR62008343 Chenopodium quinoa HOM05D001961 ORTHO05D002286 4.5e-13 79.0 131 30.5
HanXRQChr08g0236941 Helianthus annuus HOM05D001961 ORTHO05D002286 5.9e-13 78.6 126 29.4
AUR62021754 Chenopodium quinoa HOM05D001961 ORTHO05D002286 1.0e-12 77.8 131 29.8
QL05p016885 Quercus lobata HOM05D001961 ORTHO05D002286 1.7e-12 77.0 127 31.5
Aqoxy5G01466 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 3.8e-12 75.9 122 32.8
SEGI_13866 Sequoiadendron giganteum HOM05D001961 ORTHO05D002286 5.0e-12 75.5 121 30.6
ATR1153G111 Amborella trichopoda HOM05D001961 ORTHO05D002286 6.5e-12 75.1 130 32.3
Haze_06878 Corylus avellana HOM05D001961 ORTHO05D002286 8.5e-12 74.7 123 36.6
Ah.11g048820 Amaranthus hybridus HOM05D001961 ORTHO05D002286 1.9e-11 73.6 131 32.8
Haze_05896 Corylus avellana HOM05D001961 ORTHO05D002286 1.9e-11 73.6 129 33.3
Aqoxy4G02900 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 2.5e-11 73.2 146 34.9
QL05p016929 Quercus lobata HOM05D001961 ORTHO05D002286 2.5e-11 73.2 127 29.1
Aqoxy4G02940 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 3.2e-11 72.8 123 36.6
Dinv33705 Davidia involucrata HOM05D001961 ORTHO05D002286 2.1e-10 70.1 127 32.3
Ah.02g113120 Amaranthus hybridus HOM05D001961 ORTHO05D002286 3.6e-10 69.3 131 29.0
Hund02679 Selenicereus undatus HOM05D001961 ORTHO05D002286 4.7e-10 68.9 127 27.6
CiPaw.14G120700 Carya illinoinensis HOM05D001961 ORTHO05D002286 8.0e-10 68.2 146 30.8
Ciclev10018876m.g Citrus clementina HOM05D001961 ORTHO05D002286 8.0e-10 68.2 141 30.5
Aqoxy4G02909 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 3.0e-09 66.2 121 30.6
Cfa009800 Carpinus fangiana HOM05D001961 ORTHO05D002286 7.5e-08 61.6 170 26.5
CDE06G0073 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 9.8e-08 61.2 135 25.2
Aqoxy4G02899 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 1.7e-07 60.5 113 31.0
Cfa009758 Carpinus fangiana HOM05D001961 ORTHO05D002286 6.3e-07 58.5 123 27.6
Cfa021166 Carpinus fangiana HOM05D001961 ORTHO05D002286 6.3e-07 58.5 123 27.6
PSO161G0094 Papaver somniferum HOM05D001961 ORTHO05D002286 6.3e-07 58.5 93 30.1
GSVIVG01032595001 Vitis vinifera HOM05D001961 ORTHO05D002286 1.1e-06 57.8 125 29.6
Cfa009804 Carpinus fangiana HOM05D001961 ORTHO05D002286 7.0e-06 55.1 159 28.3


User provided reference genes

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