Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g41591_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 0.0e+00 1565.8 990 100.0
MBI05_g10764_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 5.8e-229 798.5 922 57.3
TAR371G0591 Trochodendron aralioides HOM05D006569 ORTHO05D007515 3.0e-169 600.1 1011 44.1
Dinv33774 Davidia involucrata HOM05D006569 ORTHO05D007515 1.7e-140 504.6 733 48.6
GSVIVG01011442001 Vitis vinifera HOM05D006569 ORTHO05D007515 1.0e-137 495.4 1023 42.8
Aqoxy3G03442 Aquilegia oxysepala HOM05D006569 ORTHO05D007515 6.0e-133 479.6 796 45.1
Rhsim10G0036300 Rhododendron simsii HOM05D006569 ORTHO05D007515 9.8e-128 462.2 757 43.9
CSS0028247 Camellia sinensis var. sinensis HOM05D006569 ORTHO05D007515 2.9e-127 460.7 1012 38.4
FAN14G1478 Fragaria x ananassa HOM05D006569 ORTHO05D007515 2.1e-125 454.5 1006 37.3
FAN02G1154 Fragaria x ananassa HOM05D006569 ORTHO05D007515 3.9e-124 450.3 757 44.6
FAN05G0252 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.9e-123 448.0 995 37.3
Lju41C9T14 Lonicera japonica HOM05D006569 ORTHO05D007515 2.5e-123 447.6 723 46.5
Manes.01G092900 Manihot esculenta HOM05D006569 ORTHO05D007515 4.0e-121 440.3 1031 35.9
MD09G1053400 Malus domestica HOM05D006569 ORTHO05D007515 1.2e-120 438.7 1037 34.9
Prupe.3G265200 Prunus persica HOM05D006569 ORTHO05D007515 1.5e-120 438.3 740 41.4
Atru.chr8.291 Acer truncatum HOM05D006569 ORTHO05D007515 2.2e-119 434.5 910 36.5
PSO013G0141 Papaver somniferum HOM05D006569 ORTHO05D007515 1.1e-118 432.2 789 44.9
PSO832G0544 Papaver somniferum HOM05D006569 ORTHO05D007515 1.4e-118 431.8 807 45.0
CANSAT64G0455 Cannabis sativa HOM05D006569 ORTHO05D007515 1.9e-118 431.4 1016 33.5
Cc07_g03540 Coffea canephora HOM05D006569 ORTHO05D007515 1.2e-117 428.7 755 42.1
CiPaw.04G004700 Carya illinoinensis HOM05D006569 ORTHO05D007515 1.6e-117 428.3 1012 36.6
FAN09G2200 Fragaria x ananassa HOM05D006569 ORTHO05D007515 2.1e-114 417.9 875 39.3
DCAR_021661 Daucus carota HOM05D006569 ORTHO05D007515 1.3e-111 408.7 773 42.0
SGA_v2.0_scaffold236G43766 Striga asiatica HOM05D006569 ORTHO05D007515 2.2e-111 407.9 752 37.8
Hund15592 Selenicereus undatus HOM05D006569 ORTHO05D007515 7.1e-110 402.9 982 34.9
Sabra17G0075800 Salix brachista HOM05D006569 ORTHO05D007515 9.3e-110 402.5 981 32.2
Ciclev10013587m.g Citrus clementina HOM05D006569 ORTHO05D007515 3.5e-109 400.6 778 40.9
Potri.017G086000 Populus trichocarpa HOM05D006569 ORTHO05D007515 1.3e-108 398.7 1035 32.0
Cpa.g.sc14.98 Carica papaya HOM05D006569 ORTHO05D007515 1.7e-108 398.3 1014 39.4
CDE04G0154 Ceratophyllum demersum HOM05D006569 ORTHO05D007515 3.9e-108 397.1 754 31.4
FvH4_6g48150 Fragaria vesca HOM05D006569 ORTHO05D007515 4.8e-106 390.2 839 38.4
Peaxi162Scf00011g00263 Petunia axillaris HOM05D006569 ORTHO05D007515 1.1e-105 389.0 711 32.8
Solyc02g067200.4 Solanum lycopersicum HOM05D006569 ORTHO05D007515 2.4e-105 387.9 949 29.5
QL02p053824 Quercus lobata HOM05D006569 ORTHO05D007515 9.0e-105 386.0 993 36.2
Oeu010220.1 Olea europaea HOM05D006569 ORTHO05D007515 2.0e-104 384.8 755 38.5
Nitab4.5_0003653g0010 Nicotiana tabacum HOM05D006569 ORTHO05D007515 1.3e-103 382.1 774 31.8
Sopen02g016380 Solanum pennellii HOM05D006569 ORTHO05D007515 1.3e-103 382.1 754 32.2
RcHm_v2.0_Chr2g0167491 Rosa chinensis HOM05D006569 ORTHO05D007515 2.2e-103 381.3 924 36.0
PGSC0003DMG400025133 Solanum tuberosum HOM05D006569 ORTHO05D007515 2.2e-103 381.3 704 32.5
AL6G26150 Arabidopsis lyrata HOM05D006569 ORTHO05D007515 4.9e-103 380.2 754 35.7
Nitab4.5_0000212g0030 Nicotiana tabacum HOM05D006569 ORTHO05D007515 6.4e-103 379.8 774 34.0
HPP92_012798 Vanilla planifolia HOM05D006569 ORTHO05D007515 8.4e-103 379.4 946 29.7
Carub.0006s1347 Capsella rubella HOM05D006569 ORTHO05D007515 5.4e-102 376.7 699 41.5
ClCG09G010340 Citrullus lanatus HOM05D006569 ORTHO05D007515 1.2e-101 375.6 765 40.3
Zm00001eb005280 Zea mays HOM05D006569 ORTHO05D007515 3.0e-100 370.9 726 32.0
SalBow6G2371 Salvia bowleyana HOM05D006569 ORTHO05D007515 8.7e-100 369.4 1031 35.3
Eucgr.I01955 Eucalyptus grandis HOM05D006569 ORTHO05D007515 1.5e-99 368.6 784 37.8
ATR1145G048 Amborella trichopoda HOM05D006569 ORTHO05D007515 4.3e-99 367.1 711 45.1
Lsat_1_v5_gn_2_89461 Lactuca sativa HOM05D006569 ORTHO05D007515 7.4e-99 366.3 949 36.8
Haze_14089 Corylus avellana HOM05D006569 ORTHO05D007515 2.8e-98 364.4 637 44.6
PGR004G0299 Punica granatum HOM05D006569 ORTHO05D007515 6.2e-98 363.2 769 42.0
AT5G15280 Arabidopsis thaliana HOM05D006569 ORTHO05D007515 8.1e-98 362.8 772 37.7
Duzib264G1306 Durio zibethinus HOM05D006569 ORTHO05D007515 8.1e-98 362.8 643 43.2
CARHR198030 Cardamine hirsuta HOM05D006569 ORTHO05D007515 4.0e-97 360.5 756 39.3
Sc10g0003480 Simmondsia chinensis HOM05D006569 ORTHO05D007515 6.9e-97 359.8 987 28.8
Lj6g0009481 Lotus japonicus HOM05D006569 ORTHO05D007515 9.0e-97 359.4 725 40.8
MELO3C023650.2 Cucumis melo HOM05D006569 ORTHO05D007515 1.2e-96 359.0 1011 33.7
Lalb_Chr15g0081471 Lupinus albus HOM05D006569 ORTHO05D007515 2.2e-95 354.8 998 32.5
THA.LOC104822352 Tarenaya hassleriana HOM05D006569 ORTHO05D007515 4.9e-95 353.6 747 34.1
AUR62018101 Chenopodium quinoa HOM05D006569 ORTHO05D007515 6.4e-95 353.2 749 33.9
Migut.K01310 Erythranthe guttata HOM05D006569 ORTHO05D007515 6.4e-95 353.2 979 35.2
CsaV3_7G024320 Cucumis sativus L. HOM05D006569 ORTHO05D007515 5.5e-94 350.1 904 34.6
TWI60G0939 Tripterygium wilfordii HOM05D006569 ORTHO05D007515 5.5e-94 350.1 1024 32.1
MSTRG.15471 Avicennia marina HOM05D006569 ORTHO05D007515 1.2e-93 349.0 990 35.3
Sp6g28790 Schrenkiella parvula HOM05D006569 ORTHO05D007515 1.8e-92 345.1 764 39.1
arahy.Tifrunner.gnm1.ann1.80L4ZA Arachis hypogaea HOM05D006569 ORTHO05D007515 6.7e-92 343.2 898 32.6
AUR62034434 Chenopodium quinoa HOM05D006569 ORTHO05D007515 8.7e-92 342.8 747 33.3
ECA238G4289 Erigeron canadensis HOM05D006569 ORTHO05D007515 1.1e-91 342.4 806 37.7
Sed0017024 Sechium edule HOM05D006569 ORTHO05D007515 1.1e-91 342.4 1012 32.8
Cfa007985 Carpinus fangiana HOM05D006569 ORTHO05D007515 3.3e-91 340.9 651 42.4
BcaNung03317 Brassica carinata HOM05D006569 ORTHO05D007515 4.8e-90 337.0 706 39.8
EL10Ac2g03001 Beta vulgaris HOM05D006569 ORTHO05D007515 4.5e-88 330.5 738 38.8
CAN.G1103.13 Capsicum annuum HOM05D006569 ORTHO05D007515 5.8e-88 330.1 692 36.1
Thhalv10012473m.g Eutrema salsugineum HOM05D006569 ORTHO05D007515 7.1e-86 323.2 745 38.9
Ah.10g031720 Amaranthus hybridus HOM05D006569 ORTHO05D007515 7.9e-85 319.7 727 38.8
BraA02t05270Z Brassica rapa HOM05D006569 ORTHO05D007515 2.1e-82 311.6 940 30.0
BcaC03g13417 Brassica carinata HOM05D006569 ORTHO05D007515 2.8e-82 311.2 757 34.2
C02p07640 Brassica napus HOM05D006569 ORTHO05D007515 1.8e-81 308.5 757 34.1
BolC2t06696H Brassica oleracea HOM05D006569 ORTHO05D007515 5.3e-81 307.0 757 34.1
Medtr3g053000 Medicago truncatula HOM05D006569 ORTHO05D007515 8.5e-79 299.7 964 29.8
HanXRQChr07g0199321 Helianthus annuus HOM05D006569 ORTHO05D007515 1.9e-78 298.5 816 26.6
TPR.G33795 Trifolium pratense HOM05D006569 ORTHO05D007515 3.3e-75 287.7 961 31.8
Psat5g175080 Pisum sativum HOM05D006569 ORTHO05D007515 4.8e-74 283.9 968 30.9
Glyma.18G093100 Glycine max HOM05D006569 ORTHO05D007515 3.1e-73 281.2 955 30.2
Aa31LG11G14260 Aethionema arabicum HOM05D006569 ORTHO05D007515 1.7e-71 275.4 540 43.0
VMungo0540G0528 Vigna mungo HOM05D006569 ORTHO05D007515 7.2e-70 270.0 847 31.5
Ca_14754_v3 Cicer arietinum L. HOM05D006569 ORTHO05D007515 1.7e-66 258.8 885 32.5
A02p02990 Brassica napus HOM05D006569 ORTHO05D007515 3.1e-65 254.6 795 33.3
COL.COLO4_10330 Corchorus olitorius HOM05D006569 ORTHO05D007515 5.0e-55 220.7 323 37.2
FAN09G3888 Fragaria x ananassa HOM05D006569 ORTHO05D007515 6.5e-55 220.3 522 43.5
MBI05_g36424_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 1.1e-54 219.5 357 43.4
FvH4_6g47953 Fragaria vesca HOM05D006569 ORTHO05D007515 1.8e-52 212.2 304 56.6
FAN09G1632 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.3e-47 196.1 285 41.8
FAN05G1756 Fragaria x ananassa HOM05D006569 ORTHO05D007515 5.7e-43 180.6 304 53.3
RcHm_v2.0_Chr2g0167581 Rosa chinensis HOM05D006569 ORTHO05D007515 1.9e-38 165.6 210 44.8
Thecc.04G085700 Theobroma cacao HOM05D006569 ORTHO05D007515 1.4e-36 159.5 205 42.0
QL93p0100_0341 Quercus lobata HOM05D006569 ORTHO05D007515 1.8e-36 159.1 469 28.4
QL02p057930 Quercus lobata HOM05D006569 ORTHO05D007515 9.8e-35 153.3 480 26.9
QL08p010038 Quercus lobata HOM05D006569 ORTHO05D007515 1.7e-34 152.5 416 41.1
FvH4_6g48880 Fragaria vesca HOM05D006569 ORTHO05D007515 1.6e-32 146.0 180 46.7
RcHm_v2.0_Chr2g0167571 Rosa chinensis HOM05D006569 ORTHO05D007515 4.1e-25 121.3 203 34.0
FAN14G0320 Fragaria x ananassa HOM05D006569 ORTHO05D007515 5.9e-24 117.5 148 45.9
FvH4_6g47954 Fragaria vesca HOM05D006569 ORTHO05D007515 7.8e-24 117.1 148 45.9
MBI05_g36422_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 1.0e-23 116.7 77 76.6
SEGI_17455 Sequoiadendron giganteum HOM05D006569 ORTHO05D007515 2.3e-23 115.5 510 38.4
Phvul.006G046500 Phaseolus vulgaris HOM05D006569 ORTHO05D007515 1.5e-22 112.8 316 25.0
Thecc.04G085800 Theobroma cacao HOM05D006569 ORTHO05D007515 8.3e-18 97.1 380 26.3
ATR0974G001 Amborella trichopoda HOM05D006569 ORTHO05D007515 9.2e-17 93.6 121 44.6
MBI05_g36421_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 2.7e-16 92.0 43 100.0
Glyma.18G108202 Glycine max HOM05D006569 ORTHO05D007515 1.7e-10 72.8 71 49.3
Ca_06378_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 3.7e-10 71.6 215 23.7
Medtr3g052970 Medicago truncatula HOM05D006569 ORTHO05D007515 3.7e-10 71.6 72 48.6
Psat2g009000 Pisum sativum HOM05D007340 ORTHO05D008979 6.4e-10 70.9 215 25.1
Os03g0168400 Oryza sativa ssp. japonica HOM05D006569 ORTHO05D007515 3.2e-09 68.6 68 47.1
HPP92_012677 Vanilla planifolia HOM05D006569 ORTHO05D007515 2.7e-08 65.5 159 30.2
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 7.8e-08 63.9 151 25.8
BcaB01g04883 Brassica carinata HOM05D007340 ORTHO05D008979 6.6e-07 60.8 104 29.8
Rhsim13G0154100 Rhododendron simsii HOM05D002890 ORTHO05D009847 8.6e-07 60.5 206 25.7
TWI38G0189 Tripterygium wilfordii HOM05D007956 ORTHO05D010152 8.6e-07 60.5 198 23.7
Psat7g256640 Pisum sativum HOM05D007340 ORTHO05D008979 1.1e-06 60.1 135 25.2
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 1.5e-06 59.7 196 25.0
FAN09G4849 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.9e-06 59.3 74 50.0
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 1.9e-06 59.3 231 25.1
Duzib235G1205 Durio zibethinus HOM05D007956 ORTHO05D010152 3.3e-06 58.5 198 21.7
SHI00355 Sapria himalayana HOM05D007340 ORTHO05D008979 3.3e-06 58.5 97 33.0
Sed0013632 Sechium edule HOM05D007340 ORTHO05D008979 5.6e-06 57.8 174 24.7
Sabra04G0061000 Salix brachista HOM05D007291 ORTHO05D009038 7.3e-06 57.4 198 24.2
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 9.5e-06 57.0 179 22.3
MSTRG.18528 Avicennia marina HOM05D007173 ORTHO05D009151 9.5e-06 57.0 138 28.3


User provided reference genes

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