Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g38417_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 1.5e-177 625.9 294 100.0
MBI05_g44031_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 6.3e-131 471.1 300 76.7
MBI05_g35610_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 2.4e-82 309.7 197 76.6
MBI05_g20724_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 6.6e-64 248.4 272 50.7
MBI05_g44032_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 3.4e-60 236.1 149 76.5
MBI05_g28548_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 1.5e-44 184.1 187 52.9
MBI05_g35609_MAGBIO Magnolia biondii HOM05D018120 ORTHO05D025783 6.0e-41 172.2 89 92.1
MBI05_g48113_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 5.3e-29 132.5 85 76.5
MBI05_g35611_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 9.4e-18 95.1 47 95.7
MBI05_g44030_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 9.4e-18 95.1 47 95.7
Ciclev10020526m.g Citrus clementina HOM05D002420 ORTHO05D002422 5.3e-13 79.3 128 32.8
Manes.05G199200 Manihot esculenta HOM05D002420 ORTHO05D002422 1.6e-09 67.8 124 36.3
Atru.chr9.129 Acer truncatum HOM05D002420 ORTHO05D002422 2.7e-09 67.0 123 30.9
Os05g0175800 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 2.7e-09 67.0 115 32.2
TAR371G0827 Trochodendron aralioides HOM05D002420 ORTHO05D002422 2.7e-09 67.0 130 31.5
Lalb_Chr05g0225771 Lupinus albus HOM05D002420 ORTHO05D002422 4.7e-09 66.2 133 31.6
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 6.1e-09 65.9 128 32.0
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 8.0e-09 65.5 128 31.2
Lalb_Chr16g0386521 Lupinus albus HOM05D002420 ORTHO05D002422 8.0e-09 65.5 124 31.5
QL04p020224 Quercus lobata HOM05D002420 ORTHO05D002422 8.0e-09 65.5 116 31.9
COL.COLO4_19852 Corchorus olitorius HOM05D002420 ORTHO05D002422 1.0e-08 65.1 124 33.9
arahy.Tifrunner.gnm1.ann1.D2CQLD Arachis hypogaea HOM05D002420 ORTHO05D002422 1.4e-08 64.7 144 29.2
Os07g0535600 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 1.4e-08 64.7 113 33.6
Os05g0177400 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 1.8e-08 64.3 114 30.7
Os05g0172100 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 2.3e-08 63.9 153 29.4
GSVIVG01026445001 Vitis vinifera HOM05D002420 ORTHO05D002422 2.3e-08 63.9 134 29.9
arahy.Tifrunner.gnm1.ann1.TS9750 Arachis hypogaea HOM05D002420 ORTHO05D002422 4.0e-08 63.2 144 29.9
Duzib168G0815 Durio zibethinus HOM05D002420 ORTHO05D002422 4.0e-08 63.2 128 33.6
Manes.09G072126 Manihot esculenta HOM05D008040 ORTHO05D010075 4.0e-08 63.2 154 29.9
Nitab4.5_0005142g0030 Nicotiana tabacum HOM05D008040 ORTHO05D010075 4.0e-08 63.2 125 28.0
QL04p019991 Quercus lobata HOM05D002420 ORTHO05D002422 4.0e-08 63.2 116 31.0
Thecc.09G282200 Theobroma cacao HOM05D002420 ORTHO05D002422 4.0e-08 63.2 128 34.4
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 5.2e-08 62.8 128 31.2
Cpa.g.sc42.22 Carica papaya HOM05D002420 ORTHO05D002422 6.7e-08 62.4 127 29.9
Nn4g25094 Nelumbo nucifera HOM05D002420 ORTHO05D002422 6.7e-08 62.4 121 34.7
Gohir.A09G095800 Gossypium hirsutum HOM05D000001 ORTHO05D010224 8.8e-08 62.0 122 32.0
QL04p019597 Quercus lobata HOM05D002420 ORTHO05D002422 8.8e-08 62.0 116 30.2
Dinv38297 Davidia involucrata HOM05D004446 ORTHO05D005346 1.2e-07 61.6 132 31.8
Nitab4.5_0011101g0010 Nicotiana tabacum HOM05D000664 ORTHO05D000491 1.2e-07 61.6 147 28.6
QL04p020508 Quercus lobata HOM05D002420 ORTHO05D002422 2.0e-07 60.8 110 30.9
Os05g0177100 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 2.6e-07 60.5 114 30.7
Potri.015G028500 Populus trichocarpa HOM05D002420 ORTHO05D002422 2.6e-07 60.5 155 29.0
QL05p077107 Quercus lobata HOM05D002420 ORTHO05D002422 2.6e-07 60.5 124 28.2
QL93p0073_1187 Quercus lobata HOM05D002420 ORTHO05D002422 2.6e-07 60.5 124 28.2
Gohir.D09G095500 Gossypium hirsutum HOM05D000001 ORTHO05D010224 3.3e-07 60.1 122 32.0
Gorai.006G112200 Gossypium raimondii HOM05D000001 ORTHO05D010224 3.3e-07 60.1 122 32.0
TWI12G0410 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 7.5e-07 58.9 260 23.1
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 7.5e-07 58.9 262 22.9
Os07g0535100 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 9.7e-07 58.5 137 28.5
Os07g0535200 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 9.7e-07 58.5 137 28.5
PSO339G3463 Papaver somniferum HOM05D008040 ORTHO05D010075 9.7e-07 58.5 140 31.4
Lj4g0009025 Lotus japonicus HOM05D002420 ORTHO05D002422 1.7e-06 57.8 125 30.4
PSO017G2897 Papaver somniferum HOM05D008040 ORTHO05D010075 1.7e-06 57.8 138 31.9
Sabra14G0057400 Salix brachista HOM05D002420 ORTHO05D002422 1.7e-06 57.8 111 27.0
Aqoxy3G00584 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 2.2e-06 57.4 116 33.6
QL04p012751 Quercus lobata HOM05D002420 ORTHO05D002422 2.2e-06 57.4 113 30.1
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 2.2e-06 57.4 144 30.6
Medtr4g134390 Medicago truncatula HOM05D002420 ORTHO05D002422 2.8e-06 57.0 138 26.8
Os07g0535700 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 2.8e-06 57.0 118 34.7
Actinidia35149 Actinidia chinensis HOM05D002420 ORTHO05D002422 3.7e-06 56.6 126 28.6
Nitab4.5_0000413g0120 Nicotiana tabacum HOM05D000664 ORTHO05D000491 3.7e-06 56.6 149 28.2
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 4.8e-06 56.2 124 31.5
PSO063G5348 Papaver somniferum HOM05D002420 ORTHO05D002422 4.8e-06 56.2 130 24.6
QL04p012713 Quercus lobata HOM05D002420 ORTHO05D002422 6.3e-06 55.8 114 29.8
QL04p013477 Quercus lobata HOM05D002420 ORTHO05D002422 6.3e-06 55.8 114 29.8
QL04p019734 Quercus lobata HOM05D002420 ORTHO05D002422 6.3e-06 55.8 113 30.1
PSO782G2286 Papaver somniferum HOM05D002420 ORTHO05D002422 8.2e-06 55.5 130 24.6
QL04p012655 Quercus lobata HOM05D002420 ORTHO05D002422 8.2e-06 55.5 115 32.2
QL04p012695 Quercus lobata HOM05D002420 ORTHO05D002422 8.2e-06 55.5 113 30.1
QL04p013493 Quercus lobata HOM05D002420 ORTHO05D002422 8.2e-06 55.5 113 30.1


User provided reference genes

Program Settings