Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g36740_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 1.3e-174 616.7 399 100.0
MBI05_g00773_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 4.1e-109 399.1 428 68.7
TAR381G0204 Trochodendron aralioides HOM05D004921 ORTHO05D006008 9.3e-69 265.0 218 69.3
TAR381G1578 Trochodendron aralioides HOM05D004921 ORTHO05D006008 6.0e-68 262.3 217 69.1
Gohir.A12G091122 Gossypium hirsutum HOM05D004921 ORTHO05D006008 1.2e-63 248.1 191 68.6
Nn5g28998 Nelumbo nucifera HOM05D004921 ORTHO05D006008 1.2e-63 248.1 219 64.8
COL.COLO4_11048 Corchorus olitorius HOM05D004921 ORTHO05D006008 2.0e-63 247.3 218 63.8
Aqoxy6G00539 Aquilegia oxysepala HOM05D004921 ORTHO05D006008 1.0e-62 245.0 219 65.3
Gohir.D11G225200 Gossypium hirsutum HOM05D004921 ORTHO05D006008 1.0e-62 245.0 218 63.3
Gorai.007G242500 Gossypium raimondii HOM05D004921 ORTHO05D006008 1.0e-62 245.0 218 63.3
Gohir.A11G198900 Gossypium hirsutum HOM05D004921 ORTHO05D006008 2.5e-61 240.4 218 62.4
ClCG01G019030 Citrullus lanatus HOM05D004921 ORTHO05D006008 3.2e-61 240.0 192 65.1
Hma1.2p1_0070F.1_g037680 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 3.2e-61 240.0 217 64.1
PSO133G0077 Papaver somniferum HOM05D004921 ORTHO05D006008 3.2e-61 240.0 218 61.5
Thecc.01G107800 Theobroma cacao HOM05D004921 ORTHO05D006008 3.2e-61 240.0 218 61.5
PSO541G2636 Papaver somniferum HOM05D004921 ORTHO05D006008 4.2e-61 239.6 218 61.5
Prupe.6G178900 Prunus persica HOM05D004921 ORTHO05D006008 4.2e-61 239.6 218 61.5
Gohir.D12G094600 Gossypium hirsutum HOM05D004921 ORTHO05D006008 1.2e-60 238.0 217 61.3
QL06p050536 Quercus lobata HOM05D004921 ORTHO05D006008 1.2e-60 238.0 217 61.8
Haze_24997 Corylus avellana HOM05D004921 ORTHO05D006008 2.7e-60 236.9 200 63.5
Gorai.008G103200 Gossypium raimondii HOM05D004921 ORTHO05D006008 2.7e-60 236.9 217 60.8
Duzib187G0704 Durio zibethinus HOM05D004921 ORTHO05D006008 3.5e-60 236.5 218 60.1
Lj4A880G51 Lonicera japonica HOM05D004921 ORTHO05D006008 6.0e-60 235.7 209 64.1
PGR004G1500 Punica granatum HOM05D004921 ORTHO05D006008 7.9e-60 235.3 218 61.5
MSTRG.2547 Avicennia marina HOM05D004921 ORTHO05D006008 1.0e-59 235.0 218 60.1
Manes.12G138700 Manihot esculenta HOM05D004921 ORTHO05D006008 2.3e-59 233.8 218 61.5
Duzib147G0642 Durio zibethinus HOM05D004921 ORTHO05D006008 3.9e-59 233.0 218 60.1
ECA246G4277 Erigeron canadensis HOM05D004921 ORTHO05D006008 3.9e-59 233.0 217 59.9
GSVIVG01022188001 Vitis vinifera HOM05D004921 ORTHO05D006008 3.9e-59 233.0 218 61.5
HanXRQChr02g0041141 Helianthus annuus HOM05D004921 ORTHO05D006008 1.1e-58 231.5 217 59.9
Lsat_1_v5_gn_5_40701 Lactuca sativa HOM05D004921 ORTHO05D006008 2.5e-58 230.3 218 59.2
Dinv21950 Davidia involucrata HOM05D004921 ORTHO05D006008 4.3e-58 229.6 171 74.9
Actinidia36610 Actinidia chinensis HOM05D004921 ORTHO05D006008 5.7e-58 229.2 218 62.4
AT4G39690 Arabidopsis thaliana HOM05D004921 ORTHO05D006008 1.3e-57 228.0 217 59.0
FvH4_1g21670 Fragaria vesca HOM05D004921 ORTHO05D006008 1.3e-57 228.0 218 58.3
Aa31LG6G15580 Aethionema arabicum HOM05D004921 ORTHO05D006008 1.6e-57 227.6 191 63.9
MELO3C007782.2 Cucumis melo HOM05D004921 ORTHO05D006008 1.6e-57 227.6 218 58.7
MSTRG.23325 Avicennia marina HOM05D004921 ORTHO05D006008 2.1e-57 227.3 218 58.3
Sopen04g024290 Solanum pennellii HOM05D004921 ORTHO05D006008 2.1e-57 227.3 215 60.0
Sp7g36200 Schrenkiella parvula HOM05D004921 ORTHO05D006008 3.7e-57 226.5 217 59.0
Lalb_Chr13g0296081 Lupinus albus HOM05D004921 ORTHO05D006008 6.3e-57 225.7 218 59.2
TWI53G0980 Tripterygium wilfordii HOM05D004921 ORTHO05D006008 6.3e-57 225.7 218 58.3
CsaV3_6G045720 Cucumis sativus L. HOM05D004921 ORTHO05D006008 1.1e-56 224.9 218 58.3
Eucgr.I00377 Eucalyptus grandis HOM05D004921 ORTHO05D006008 1.1e-56 224.9 217 59.4
Lalb_Chr07g0184941 Lupinus albus HOM05D004921 ORTHO05D006008 1.8e-56 224.2 217 58.1
CDE06G0766 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 3.1e-56 223.4 216 60.2
Rhsim10G0156300 Rhododendron simsii HOM05D004921 ORTHO05D006008 3.1e-56 223.4 223 57.8
CANSAT01G2911 Cannabis sativa HOM05D004921 ORTHO05D006008 4.1e-56 223.0 171 69.6
CDE04G0927 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 5.3e-56 222.6 220 59.5
Lj4g0017071 Lotus japonicus HOM05D004921 ORTHO05D006008 5.3e-56 222.6 218 59.6
Peaxi162Scf00204g00620 Petunia axillaris HOM05D004921 ORTHO05D006008 5.3e-56 222.6 192 64.6
CARHR247030 Cardamine hirsuta HOM05D004921 ORTHO05D006008 6.9e-56 222.2 217 58.1
VMungo0251G2130 Vigna mungo HOM05D004921 ORTHO05D006008 9.0e-56 221.9 218 59.2
Glyma.05G181700 Glycine max HOM05D004921 ORTHO05D006008 1.2e-55 221.5 217 59.4
Thhalv10024641m.g Eutrema salsugineum HOM05D004921 ORTHO05D006008 3.4e-55 219.9 217 57.1
Sc03g0002320 Simmondsia chinensis HOM05D004921 ORTHO05D006008 3.4e-55 219.9 218 57.3
Atru.chr4.263 Acer truncatum HOM05D004921 ORTHO05D006008 4.5e-55 219.5 170 67.6
Sed0006076 Sechium edule HOM05D004921 ORTHO05D006008 4.5e-55 219.5 218 57.3
Migut.H02393 Erythranthe guttata HOM05D004921 ORTHO05D006008 1.0e-54 218.4 214 58.4
MD01G1023900 Malus domestica HOM05D004921 ORTHO05D006008 1.3e-54 218.0 171 65.5
RcHm_v2.0_Chr2g0115541 Rosa chinensis HOM05D004921 ORTHO05D006008 1.3e-54 218.0 171 67.3
Psat7g053360 Pisum sativum HOM05D004921 ORTHO05D006008 1.7e-54 217.6 218 57.3
THA.LOC104807708 Tarenaya hassleriana HOM05D004921 ORTHO05D006008 1.7e-54 217.6 185 64.9
Phvul.002G262700 Phaseolus vulgaris HOM05D004921 ORTHO05D006008 2.9e-54 216.9 216 56.5
Carub.0007s0157 Capsella rubella HOM05D004921 ORTHO05D006008 3.8e-54 216.5 217 56.7
Potri.005G080200 Populus trichocarpa HOM05D004921 ORTHO05D006008 5.0e-54 216.1 218 56.4
SGA_v2.0_scaffold51G18730 Striga asiatica HOM05D004921 ORTHO05D006008 5.0e-54 216.1 223 55.6
AL7G11890 Arabidopsis lyrata HOM05D004921 ORTHO05D006008 6.5e-54 215.7 214 57.9
Nitab4.5_0001095g0090 Nicotiana tabacum HOM05D004921 ORTHO05D006008 6.5e-54 215.7 217 56.7
Ciclev10025222m.g Citrus clementina HOM05D004921 ORTHO05D006008 8.4e-54 215.3 170 67.1
Potri.007G087100 Populus trichocarpa HOM05D004921 ORTHO05D006008 1.4e-53 214.5 217 56.2
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea HOM05D004921 ORTHO05D006008 4.2e-53 213.0 220 55.5
AUR62003756 Chenopodium quinoa HOM05D004921 ORTHO05D006008 7.2e-53 212.2 218 53.7
CiPaw.03G138100 Carya illinoinensis HOM05D004921 ORTHO05D006008 9.3e-53 211.8 171 65.5
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea HOM05D004921 ORTHO05D006008 1.6e-52 211.1 224 54.5
BcaC01g00311 Brassica carinata HOM05D004921 ORTHO05D006008 1.6e-52 211.1 217 55.8
C03p78130 Brassica napus HOM05D004921 ORTHO05D006008 1.6e-52 211.1 217 55.8
BraA08t34298Z Brassica rapa HOM05D004921 ORTHO05D006008 2.1e-52 210.7 217 55.8
BcaB03g12266 Brassica carinata HOM05D004921 ORTHO05D006008 6.1e-52 209.1 217 55.3
BolC3t20076H Brassica oleracea HOM05D004921 ORTHO05D006008 1.8e-51 207.6 217 54.8
AUR62002041 Chenopodium quinoa HOM05D004921 ORTHO05D006008 5.1e-51 206.1 218 52.3
TPR.G2186 Trifolium pratense HOM05D004921 ORTHO05D006008 1.1e-50 204.9 170 62.4
HPP92_016473 Vanilla planifolia HOM05D004921 ORTHO05D006008 1.5e-50 204.5 217 57.6
FAN19G2080 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.9e-50 204.1 181 61.3
FAN28G0310 Fragaria x ananassa HOM05D004921 ORTHO05D006008 3.3e-50 203.4 181 60.8
FAN26G3332 Fragaria x ananassa HOM05D004921 ORTHO05D006008 5.7e-50 202.6 181 60.8
FAN26G3387 Fragaria x ananassa HOM05D004921 ORTHO05D006008 5.7e-50 202.6 181 60.8
vmacro12934 Vaccinium macrocarpon HOM05D004921 ORTHO05D006008 1.3e-49 201.4 193 60.1
Glyma.08G139400 Glycine max HOM05D004921 ORTHO05D006008 1.6e-49 201.1 170 62.4
Medtr8g091480 Medicago truncatula HOM05D004921 ORTHO05D006008 2.8e-49 200.3 216 54.2
FAN23G2445 Fragaria x ananassa HOM05D004921 ORTHO05D006008 6.3e-49 199.1 197 56.3
DCAR_001020 Daucus carota HOM05D004921 ORTHO05D006008 8.2e-49 198.7 192 57.3
A08p23440 Brassica napus HOM05D004921 ORTHO05D006008 1.4e-48 198.0 240 50.4
ATR0661G561 Amborella trichopoda HOM05D004921 ORTHO05D006008 5.3e-48 196.1 224 53.1
Sabra05G0065800 Salix brachista HOM05D004921 ORTHO05D006008 7.7e-47 192.2 218 52.3
Ah.03g142660 Amaranthus hybridus HOM05D004921 ORTHO05D006008 1.3e-46 191.4 219 52.1
EL10Ac6g15063 Beta vulgaris HOM05D004921 ORTHO05D006008 1.3e-46 191.4 218 51.4
MD15G1329400 Malus domestica HOM05D004921 ORTHO05D006008 1.4e-45 188.0 217 50.7
HPP92_027138 Vanilla planifolia HOM05D004921 ORTHO05D006008 1.4e-45 188.0 186 59.7
Hund13647 Selenicereus undatus HOM05D004921 ORTHO05D006008 2.5e-45 187.2 214 51.4
Zm00001eb431730 Zea mays HOM05D004921 ORTHO05D006008 3.2e-45 186.8 218 48.6
SEGI_07937 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 1.0e-43 181.8 215 46.5
unitig_0.g2479 Utricularia gibba HOM05D004921 ORTHO05D006008 7.4e-42 175.6 193 52.3
BcaNung05547 Brassica carinata HOM05D004921 ORTHO05D006008 3.8e-38 163.3 191 53.4
Sabra07G0072000 Salix brachista HOM05D004921 ORTHO05D006008 1.8e-35 154.5 192 49.5
Dinv16320 Davidia involucrata HOM05D004921 ORTHO05D006008 3.0e-35 153.7 125 64.8
AagrBONN_evm.TU.Sc2ySwM_344.1023 Anthoceros agrestis HOM05D004921 ORTHO05D006008 2.2e-30 137.5 171 43.3
Mapoly0001s0396 Marchantia polymorpha HOM05D004921 ORTHO05D006008 5.0e-30 136.3 192 38.5
BraA01t00066Z Brassica rapa HOM05D004921 ORTHO05D006008 6.5e-30 136.0 185 48.1
A01p00580 Brassica napus HOM05D004921 ORTHO05D006008 8.5e-30 135.6 185 48.1
Cc07_g15670 Coffea canephora HOM05D004921 ORTHO05D006008 3.2e-29 133.7 118 61.0
BolC1t00074H Brassica oleracea HOM05D004921 ORTHO05D006008 1.2e-28 131.7 105 65.7
Nitab4.5_0000518g0050 Nicotiana tabacum HOM05D004921 ORTHO05D006008 1.2e-28 131.7 111 60.4
CAN.G727.1 Capsicum annuum HOM05D004921 ORTHO05D006008 1.6e-28 131.3 117 58.1
BcaNung00891 Brassica carinata HOM05D004921 ORTHO05D006008 1.4e-27 128.3 92 73.9
C01p00710 Brassica napus HOM05D004921 ORTHO05D006008 3.0e-27 127.1 106 65.1
Cpa.g.sc82.58 Carica papaya HOM05D004921 ORTHO05D006008 4.0e-27 126.7 112 59.8
Pp3c3_27510 Physcomitrium patens HOM05D004921 ORTHO05D006008 3.7e-25 120.2 216 37.5
SMO174G0199 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 1.4e-24 118.2 172 38.4
CBR_g51480 Chara braunii HOM05D004921 ORTHO05D006008 5.9e-23 112.8 169 39.6
Cc07_g15680 Coffea canephora HOM05D004921 ORTHO05D006008 1.7e-22 111.3 112 58.0
SMO197G0017 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 5.0e-22 109.8 188 36.2
Nn5g31279 Nelumbo nucifera HOM05D004921 ORTHO05D006008 3.2e-21 107.1 93 65.6
SEGI_21175 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 9.4e-21 105.5 110 46.4
Cpa.g.sc82.56 Carica papaya HOM05D004921 ORTHO05D006008 1.4e-16 91.7 74 68.9
SEGI_00052 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 1.9e-13 81.3 106 46.2
MCO12G391 Micromonas commoda HOM05D004921 ORTHO05D006008 3.7e-09 67.0 200 25.0


User provided reference genes

Program Settings