Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 1.0e-45 186.4 96 100.0
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 2.3e-26 122.1 96 65.6
Nn2g13483 Nelumbo nucifera HOM05D007574 ORTHO05D007552 3.1e-26 121.7 95 67.4
TAR623G1460 Trochodendron aralioides HOM05D007574 ORTHO05D007552 4.4e-25 117.9 96 64.6
TAR633G0850 Trochodendron aralioides HOM05D007574 ORTHO05D007552 9.8e-25 116.7 95 65.3
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 4.1e-23 111.3 95 64.2
GSVIVG01034109001 Vitis vinifera HOM05D007574 ORTHO05D007552 1.2e-22 109.8 95 61.1
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 1.6e-22 109.4 95 63.2
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 3.5e-22 108.2 88 60.2
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 6.0e-22 107.5 95 65.3
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 6.0e-22 107.5 96 59.4
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 1.0e-21 106.7 95 62.1
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 1.0e-21 106.7 95 62.1
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 3.0e-21 105.1 85 65.9
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 8.6e-21 103.6 93 62.4
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 8.6e-21 103.6 96 63.5
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 1.5e-20 102.8 97 59.8
Manes.08G080600 Manihot esculenta HOM05D007574 ORTHO05D007552 4.3e-20 101.3 95 60.0
Duzib128G0069 Durio zibethinus HOM05D007574 ORTHO05D007552 9.5e-20 100.1 96 59.4
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 1.6e-19 99.4 101 58.4
Hma1.2p1_0766F.1_g215190 Hydrangea macrophylla HOM05D007574 ORTHO05D007552 3.6e-19 98.2 72 68.1
ATR0665G027 Amborella trichopoda HOM05D007574 ORTHO05D007552 6.2e-19 97.4 99 57.6
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 2.3e-18 95.5 92 55.4
PGR031G1556 Punica granatum HOM05D007574 ORTHO05D007552 2.3e-18 95.5 100 57.0
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 2.3e-18 95.5 92 55.4
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 4.0e-18 94.7 94 58.5
CiPaw.10G148000 Carya illinoinensis HOM05D007574 ORTHO05D007552 8.9e-18 93.6 102 56.9
FAN09G4076 Fragaria x ananassa HOM05D007574 ORTHO05D007552 1.5e-17 92.8 91 56.0
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 1.5e-17 92.8 94 59.6
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 2.0e-17 92.4 93 53.8
ClCG10G021430 Citrullus lanatus HOM05D007574 ORTHO05D007552 4.4e-17 91.3 95 61.1
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 4.4e-17 91.3 93 55.9
Lj3g0003670 Lotus japonicus HOM05D007574 ORTHO05D007552 5.8e-17 90.9 96 54.2
MELO3C009230.2 Cucumis melo HOM05D007574 ORTHO05D007552 4.9e-16 87.8 97 57.7
Duzib106G1300 Durio zibethinus HOM05D007574 ORTHO05D007552 4.9e-16 87.8 91 53.8
MD04G1135900 Malus domestica HOM05D007574 ORTHO05D007552 4.9e-16 87.8 90 55.6
Nitab4.5_0004744g0030 Nicotiana tabacum HOM05D007574 ORTHO05D007552 4.9e-16 87.8 80 58.8
Gohir.D04G123600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 6.4e-16 87.4 102 52.9
CsaV3_3G034590 Cucumis sativus L. HOM05D007574 ORTHO05D007552 8.3e-16 87.0 94 59.6
Gorai.012G106400 Gossypium raimondii HOM05D007574 ORTHO05D007552 8.3e-16 87.0 102 53.9
PGSC0003DMG400019195 Solanum tuberosum HOM05D007574 ORTHO05D007552 1.4e-15 86.3 89 52.8
Gohir.A04G084700 Gossypium hirsutum HOM05D007574 ORTHO05D007552 4.1e-15 84.7 104 50.0
Rhsim05G0198100 Rhododendron simsii HOM05D007574 ORTHO05D007552 4.1e-15 84.7 92 53.3
Prupe.6G261000 Prunus persica HOM05D007574 ORTHO05D007552 9.2e-15 83.6 89 57.3
Gohir.D01G210600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.6e-14 82.8 100 56.0
Gorai.002G256300 Gossypium raimondii HOM05D007574 ORTHO05D007552 1.6e-14 82.8 100 56.0
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 2.7e-14 82.0 94 48.9
Gohir.A01G221600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 2.7e-14 82.0 71 64.8
Atru.chr8.2045 Acer truncatum HOM05D007574 ORTHO05D007552 4.6e-14 81.3 95 49.5
Peaxi162Scf00330g00113 Petunia axillaris HOM05D007574 ORTHO05D007552 4.6e-14 81.3 94 53.2
Rhsim05G0196100 Rhododendron simsii HOM05D007574 ORTHO05D007552 1.0e-13 80.1 92 52.2
Cpa.g.c39617 Carica papaya HOM05D007574 ORTHO05D007552 1.7e-13 79.3 95 50.5
Atru.chr8.2052 Acer truncatum HOM05D007574 ORTHO05D007552 3.9e-13 78.2 95 47.4
MBI14_g13884_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 3.9e-13 78.2 71 57.7
Phvul.010G016401 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 3.9e-13 78.2 86 53.5
Eucgr.K03060 Eucalyptus grandis HOM05D007574 ORTHO05D007552 8.6e-13 77.0 94 46.8
Manes.02G127800 Manihot esculenta HOM05D007574 ORTHO05D007552 1.1e-12 76.6 93 49.5
Glyma.18G187300 Glycine max HOM05D007574 ORTHO05D007552 2.5e-12 75.5 96 51.0
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 2.5e-12 75.5 94 48.9
Sed0004598 Sechium edule HOM05D007574 ORTHO05D007552 5.6e-12 74.3 94 52.1
Lalb_Chr03g0042511 Lupinus albus HOM05D007574 ORTHO05D007552 2.8e-11 72.0 85 50.6
Medtr4g021330 Medicago truncatula HOM05D007574 ORTHO05D007552 4.7e-11 71.2 96 46.9
Oeu001849.1 Olea europaea HOM05D007574 ORTHO05D007552 1.1e-10 70.1 85 51.8
DCAR_012128 Daucus carota HOM05D007574 ORTHO05D007552 1.8e-10 69.3 47 70.2
Nitab4.5_0004598g0040 Nicotiana tabacum HOM05D007574 ORTHO05D007552 2.4e-10 68.9 80 51.2
PGSC0003DMG400008893 Solanum tuberosum HOM05D007574 ORTHO05D007552 2.4e-10 68.9 75 56.0
Lalb_Chr19g0125161 Lupinus albus HOM05D007574 ORTHO05D007552 4.0e-10 68.2 95 45.3
TPR.G5586 Trifolium pratense HOM05D007574 ORTHO05D007552 4.0e-10 68.2 94 48.9
Glyma.07G136800 Glycine max HOM05D007574 ORTHO05D007552 5.2e-10 67.8 95 46.3
Sopen09g005930 Solanum pennellii HOM05D007574 ORTHO05D007552 5.2e-10 67.8 76 57.9
HPP92_019232 Vanilla planifolia HOM05D007574 ORTHO05D007552 5.2e-10 67.8 47 59.6
MD12G1149400 Malus domestica HOM05D007574 ORTHO05D007552 6.8e-10 67.4 91 45.1
Solyc09g011190.1 Solanum lycopersicum HOM05D007574 ORTHO05D007552 6.8e-10 67.4 73 56.2
Migut.L01966 Erythranthe guttata HOM05D007574 ORTHO05D007552 1.5e-09 66.2 85 45.9
Lj1g0014408 Lotus japonicus HOM05D007574 ORTHO05D007552 2.0e-09 65.9 95 42.1
Thecc.09G313900 Theobroma cacao HOM05D007574 ORTHO05D007552 2.0e-09 65.9 78 46.2
AUR62027719 Chenopodium quinoa HOM05D007574 ORTHO05D007552 2.6e-09 65.5 97 44.3
Ciclev10027461m.g Citrus clementina HOM05D007574 ORTHO05D007552 5.8e-09 64.3 79 45.6
COL.COLO4_18585 Corchorus olitorius HOM05D007574 ORTHO05D007552 5.8e-09 64.3 69 47.8
Medtr7g063490 Medicago truncatula HOM05D007574 ORTHO05D007552 7.6e-09 63.9 95 47.4
Lalb_Chr01g0022701 Lupinus albus HOM05D007574 ORTHO05D007552 1.3e-08 63.2 94 44.7
PSO675G0145 Papaver somniferum HOM05D007574 ORTHO05D007552 2.2e-08 62.4 85 44.7
THA.LOC109116793 Tarenaya hassleriana HOM05D009057 ORTHO05D011698 2.2e-08 62.4 83 50.6
Solyc10g086630.2 Solanum lycopersicum HOM05D007574 ORTHO05D007552 2.9e-08 62.0 83 47.0
Sp4g20120 Schrenkiella parvula HOM05D009505 ORTHO05D007552 4.9e-08 61.2 88 39.8
Sopen10g036030 Solanum pennellii HOM05D007574 ORTHO05D007552 4.9e-08 61.2 82 47.6
TPR.G27329 Trifolium pratense HOM05D007574 ORTHO05D007552 6.4e-08 60.8 94 44.7
BolC4t28121H Brassica oleracea HOM05D009505 ORTHO05D007552 1.1e-07 60.1 88 40.9
SalBow5G2190 Salvia bowleyana HOM05D007574 ORTHO05D007552 1.4e-07 59.7 47 63.8
BcaC02g07493 Brassica carinata HOM05D009505 ORTHO05D007552 2.4e-07 58.9 88 39.8
C04p66190 Brassica napus HOM05D009505 ORTHO05D007552 2.4e-07 58.9 88 39.8
Aqoxy1G00836 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 3.2e-07 58.5 80 45.0
Lsat_1_v5_gn_6_117001 Lactuca sativa HOM05D007574 ORTHO05D007552 3.2e-07 58.5 75 49.3
Lj1g0012526 Lotus japonicus HOM05D007574 ORTHO05D007552 3.2e-07 58.5 95 38.9
BraA05t19787Z Brassica rapa HOM05D009505 ORTHO05D007552 4.2e-07 58.2 88 40.9
EL10Ac7g17001 Beta vulgaris HOM05D007574 ORTHO05D007552 5.4e-07 57.8 92 43.5
AUR62043962 Chenopodium quinoa HOM05D007574 ORTHO05D007552 5.4e-07 57.8 97 40.2
Os05g0456900 Oryza sativa ssp. japonica HOM05D007574 ORTHO05D007552 7.1e-07 57.4 93 37.6
Prupe.6G068600 Prunus persica HOM05D007574 ORTHO05D007552 7.1e-07 57.4 87 40.2
AL6G11310 Arabidopsis lyrata HOM05D009057 ORTHO05D011698 9.3e-07 57.0 74 43.2
C04p10180 Brassica napus HOM05D009505 ORTHO05D007552 9.3e-07 57.0 88 40.9
Thhalv10017906m.g Eutrema salsugineum HOM05D009505 ORTHO05D007552 9.3e-07 57.0 88 39.8
BcaNung04449 Brassica carinata HOM05D009057 ORTHO05D011698 1.2e-06 56.6 84 42.9
BraA10t45380Z Brassica rapa HOM05D009057 ORTHO05D011698 1.2e-06 56.6 77 45.5
Sc01g0004620 Simmondsia chinensis HOM05D007574 ORTHO05D007552 1.6e-06 56.2 96 41.7
Aa31sc218G10 Aethionema arabicum HOM05D009505 ORTHO05D007552 2.1e-06 55.8 88 44.3
AT5G02090 Arabidopsis thaliana HOM05D009057 ORTHO05D011698 2.1e-06 55.8 74 41.9
Ah.01g023650 Amaranthus hybridus HOM05D007574 ORTHO05D007552 2.7e-06 55.5 79 45.6
BcaB01g03759 Brassica carinata HOM05D009505 ORTHO05D007552 2.7e-06 55.5 88 40.9
BolC9t60174H Brassica oleracea HOM05D000031 ORTHO05D001864 2.7e-06 55.5 61 49.2
Carub.0004s1969 Capsella rubella HOM05D009505 ORTHO05D007552 2.7e-06 55.5 88 42.0
CARHR211270 Cardamine hirsuta HOM05D009057 ORTHO05D011698 2.7e-06 55.5 82 43.9
BcaB06g29026 Brassica carinata HOM05D009505 ORTHO05D007552 6.0e-06 54.3 92 38.0
Thhalv10015172m.g Eutrema salsugineum HOM05D009057 ORTHO05D011698 6.0e-06 54.3 75 41.3


User provided reference genes

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