Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g33750_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 6.9e-98 360.5 170 100.0
MBI05_g38197_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 3.9e-32 142.1 202 44.6
MBI07_g28657_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.1e-31 140.6 187 45.5
MBI05_g21322_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 2.1e-30 136.3 199 43.2
MBI15_g37121_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 2.3e-29 132.9 100 65.0
MBI05_g40674_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 7.8e-25 117.9 188 38.8
MBI05_g40673_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 6.6e-24 114.8 196 37.2
Aqoxy7G01445 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 6.9e-21 104.8 195 33.8
Aqoxy7G04015 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 1.5e-20 103.6 190 35.3
PSO210G3757 Papaver somniferum HOM05D003596 ORTHO05D004256 3.8e-19 99.0 195 33.8
PSO210G4954 Papaver somniferum HOM05D003596 ORTHO05D004256 1.4e-18 97.1 195 33.3
PSO386G0091 Papaver somniferum HOM05D003596 ORTHO05D004256 1.4e-18 97.1 196 31.6
Manes.16G083300 Manihot esculenta HOM05D003596 ORTHO05D004256 2.4e-18 96.3 197 34.5
TAR626G0212 Trochodendron aralioides HOM05D003596 ORTHO05D004256 2.4e-18 96.3 183 33.9
Thecc.09G058900 Theobroma cacao HOM05D003596 ORTHO05D004256 5.4e-18 95.1 185 34.1
Aqoxy7G03993 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 9.3e-18 94.4 183 33.9
Ciclev10008761m.g Citrus clementina HOM05D003596 ORTHO05D004256 9.3e-18 94.4 183 32.8
PSO063G3496 Papaver somniferum HOM05D003596 ORTHO05D004256 9.3e-18 94.4 192 33.3
Eucgr.C00673 Eucalyptus grandis HOM05D003596 ORTHO05D004256 1.6e-17 93.6 186 33.3
DCAR_003143 Daucus carota HOM05D003596 ORTHO05D004256 2.1e-17 93.2 197 34.0
PSO210G3791 Papaver somniferum HOM05D003596 ORTHO05D004256 2.1e-17 93.2 195 31.8
CANSAT21G2424 Cannabis sativa HOM05D003596 ORTHO05D004256 2.7e-17 92.8 197 32.0
Duzib150G0181 Durio zibethinus HOM05D003596 ORTHO05D004256 2.7e-17 92.8 197 33.0
HanXRQChr03g0071431 Helianthus annuus HOM05D003596 ORTHO05D004256 3.5e-17 92.4 197 32.5
Prupe.1G407700 Prunus persica HOM05D003596 ORTHO05D004256 4.6e-17 92.0 183 31.7
TWI63G1485 Tripterygium wilfordii HOM05D003596 ORTHO05D004256 4.6e-17 92.0 189 31.2
Sed0005044 Sechium edule HOM05D003596 ORTHO05D004256 6.0e-17 91.7 197 31.5
Haze_18139 Corylus avellana HOM05D003596 ORTHO05D004256 7.8e-17 91.3 185 32.4
RcHm_v2.0_Chr6g0311401 Rosa chinensis HOM05D003596 ORTHO05D004256 7.8e-17 91.3 183 32.2
CiPaw.15G034900 Carya illinoinensis HOM05D003596 ORTHO05D004256 1.0e-16 90.9 197 32.0
Gorai.009G042400 Gossypium raimondii HOM05D003596 ORTHO05D004256 1.0e-16 90.9 185 33.5
Gohir.A05G040200 Gossypium hirsutum HOM05D003596 ORTHO05D004256 1.3e-16 90.5 185 33.5
Rhsim05G0069300 Rhododendron simsii HOM05D003596 ORTHO05D004256 1.3e-16 90.5 197 33.0
Gohir.D05G041700 Gossypium hirsutum HOM05D003596 ORTHO05D004256 1.7e-16 90.1 185 33.5
Cfa017996 Carpinus fangiana HOM05D003596 ORTHO05D004256 3.0e-16 89.4 185 31.4
MD15G1054300 Malus domestica HOM05D003596 ORTHO05D004256 3.0e-16 89.4 183 31.1
CAN.G143.21 Capsicum annuum HOM05D003596 ORTHO05D004256 3.9e-16 89.0 197 31.0
Dinv12460 Davidia involucrata HOM05D003596 ORTHO05D004256 3.9e-16 89.0 183 32.2
Lj1g0007600 Lotus japonicus HOM05D003596 ORTHO05D004256 3.9e-16 89.0 195 31.8
ATR0051G014 Amborella trichopoda HOM05D003596 ORTHO05D004256 5.1e-16 88.6 184 29.9
CSS0012931 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 5.1e-16 88.6 197 31.5
CSS0037935 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 5.1e-16 88.6 197 31.5
COL.COLO4_21105 Corchorus olitorius HOM05D003596 ORTHO05D004256 5.1e-16 88.6 197 31.5
vmacro17443 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 5.1e-16 88.6 197 32.0
vmacro22567 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 5.1e-16 88.6 197 32.0
MSTRG.25976 Avicennia marina HOM05D003596 ORTHO05D004256 6.6e-16 88.2 185 30.3
Atru.chr7.1921 Acer truncatum HOM05D003596 ORTHO05D004256 8.7e-16 87.8 183 32.2
QL02p000417 Quercus lobata HOM05D003596 ORTHO05D004256 8.7e-16 87.8 197 31.0
GSVIVG01035424001 Vitis vinifera HOM05D003596 ORTHO05D004256 8.7e-16 87.8 195 32.3
PSO832G4098 Papaver somniferum HOM05D003596 ORTHO05D004256 1.1e-15 87.4 136 36.8
Peaxi162Scf00070g00020 Petunia axillaris HOM05D003596 ORTHO05D004256 1.1e-15 87.4 185 30.3
CsaV3_4G035870 Cucumis sativus L. HOM05D003596 ORTHO05D004256 1.5e-15 87.0 185 30.8
Glyma.04G054100 Glycine max HOM05D003596 ORTHO05D004256 1.9e-15 86.7 184 31.0
Sc06g0001060 Simmondsia chinensis HOM05D003596 ORTHO05D004256 1.9e-15 86.7 185 33.5
Migut.A00103 Erythranthe guttata HOM05D003596 ORTHO05D004256 2.5e-15 86.3 185 30.8
FvH4_2g31420 Fragaria vesca HOM05D003596 ORTHO05D004256 2.5e-15 86.3 183 30.6
FAN24G3537 Fragaria x ananassa HOM05D003596 ORTHO05D004256 2.5e-15 86.3 183 30.6
Phvul.009G079900 Phaseolus vulgaris HOM05D003596 ORTHO05D004256 3.3e-15 85.9 184 30.4
Actinidia29320 Actinidia chinensis HOM05D003596 ORTHO05D004256 5.6e-15 85.1 199 29.6
Lalb_Chr08g0244911 Lupinus albus HOM05D003596 ORTHO05D004256 5.6e-15 85.1 195 31.3
Ah.10g034070 Amaranthus hybridus HOM05D003596 ORTHO05D004256 7.3e-15 84.7 189 30.2
AUR62009106 Chenopodium quinoa HOM05D003596 ORTHO05D004256 7.3e-15 84.7 184 30.4
PGR031G3048 Punica granatum HOM05D003596 ORTHO05D004256 7.3e-15 84.7 184 29.9
Lsat_1_v5_gn_7_60761 Lactuca sativa HOM05D003596 ORTHO05D004256 9.6e-15 84.3 197 29.4
Nn8g38751 Nelumbo nucifera HOM05D003596 ORTHO05D004256 9.6e-15 84.3 183 30.6
VMungo1309G0065 Vigna mungo HOM05D003596 ORTHO05D004256 9.6e-15 84.3 183 30.1
Ca_15814_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 1.3e-14 84.0 195 30.8
Ca_15848_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 1.3e-14 84.0 195 30.8
Glyma.06G054400 Glycine max HOM05D003596 ORTHO05D004256 1.3e-14 84.0 184 31.5
HanXRQChr11g0345821 Helianthus annuus HOM05D003596 ORTHO05D004256 1.3e-14 84.0 160 31.9
BcaC09g52108 Brassica carinata HOM05D003596 ORTHO05D004256 1.6e-14 83.6 189 29.6
C01p05570 Brassica napus HOM05D003596 ORTHO05D004256 1.6e-14 83.6 189 29.6
BolC1t00537H Brassica oleracea HOM05D003596 ORTHO05D004256 1.6e-14 83.6 189 29.6
Hund03308 Selenicereus undatus HOM05D003596 ORTHO05D004256 1.6e-14 83.6 184 31.5
Solyc08g062610.4 Solanum lycopersicum HOM05D003596 ORTHO05D004256 1.6e-14 83.6 185 29.7
Sopen08g018080 Solanum pennellii HOM05D003596 ORTHO05D004256 1.6e-14 83.6 185 29.7
Sopen08g018130 Solanum pennellii HOM05D003596 ORTHO05D004256 1.6e-14 83.6 185 29.7
C07p59490 Brassica napus HOM05D003596 ORTHO05D004256 2.1e-14 83.2 189 30.2
AUR62020561 Chenopodium quinoa HOM05D003596 ORTHO05D004256 2.1e-14 83.2 184 30.4
AUR62020565 Chenopodium quinoa HOM05D003596 ORTHO05D004256 2.1e-14 83.2 184 30.4
MELO3C016892.2 Cucumis melo HOM05D003596 ORTHO05D004256 2.1e-14 83.2 197 29.4
PSO063G0821 Papaver somniferum HOM05D003596 ORTHO05D004256 2.8e-14 82.8 191 30.4
QL02p000424 Quercus lobata HOM05D003596 ORTHO05D004256 2.8e-14 82.8 174 32.2
Sabra18G0052600 Salix brachista HOM05D003596 ORTHO05D004256 2.8e-14 82.8 183 30.1
THA.LOC104803717 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 2.8e-14 82.8 201 29.9
arahy.Tifrunner.gnm1.ann1.YCFU7L Arachis hypogaea HOM05D003596 ORTHO05D004256 3.6e-14 82.4 195 29.7
EL10Ac2g03812 Beta vulgaris HOM05D003596 ORTHO05D004256 3.6e-14 82.4 188 29.3
ECA240G3089 Erigeron canadensis HOM05D003596 ORTHO05D004256 3.6e-14 82.4 197 29.9
BcaNung02153 Brassica carinata HOM05D003596 ORTHO05D004256 4.8e-14 82.0 183 30.1
A01p05090 Brassica napus HOM05D003596 ORTHO05D004256 4.8e-14 82.0 189 29.1
BraA01t00492Z Brassica rapa HOM05D003596 ORTHO05D004256 4.8e-14 82.0 189 29.1
Thhalv10025572m.g Eutrema salsugineum HOM05D003596 ORTHO05D004256 4.8e-14 82.0 189 29.6
FAN15G0358 Fragaria x ananassa HOM05D003596 ORTHO05D004256 4.8e-14 82.0 183 29.0
Psat5g035520 Pisum sativum HOM05D003596 ORTHO05D004256 4.8e-14 82.0 195 30.3
THA.LOC104803716 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 4.8e-14 82.0 197 31.0
BcaC09g52112 Brassica carinata HOM05D003596 ORTHO05D004256 6.2e-14 81.6 173 30.6
Cpa.g.sc91.83 Carica papaya HOM05D003596 ORTHO05D004256 6.2e-14 81.6 185 29.7
MELO3C016893.2 Cucumis melo HOM05D003596 ORTHO05D004256 6.2e-14 81.6 198 28.8
TPR.G3519 Trifolium pratense HOM05D003596 ORTHO05D004256 6.2e-14 81.6 195 29.7
HPP92_023980 Vanilla planifolia HOM05D003596 ORTHO05D004256 6.2e-14 81.6 185 30.8
Aa31sc651G10 Aethionema arabicum HOM05D003596 ORTHO05D004256 8.1e-14 81.3 190 30.0
PSO384G1609 Papaver somniferum HOM05D003596 ORTHO05D004256 8.1e-14 81.3 193 29.0
SalBow4G3232 Salvia bowleyana HOM05D003596 ORTHO05D004256 8.1e-14 81.3 185 30.3
SGA_v2.0_scaffold64G21855 Striga asiatica HOM05D003596 ORTHO05D004256 8.1e-14 81.3 185 29.2
arahy.Tifrunner.gnm1.ann1.N0QBSQ Arachis hypogaea HOM05D003596 ORTHO05D004256 1.1e-13 80.9 195 29.7
PSO063G4959 Papaver somniferum HOM05D003596 ORTHO05D004256 1.1e-13 80.9 193 28.5
Sp7g30860 Schrenkiella parvula HOM05D003596 ORTHO05D004256 1.1e-13 80.9 189 29.1
BolC7t46393H Brassica oleracea HOM05D003596 ORTHO05D004256 1.4e-13 80.5 183 29.5
PSO832G4001 Papaver somniferum HOM05D003596 ORTHO05D004256 1.4e-13 80.5 193 28.0
A03p61780 Brassica napus HOM05D003596 ORTHO05D004256 1.8e-13 80.1 182 30.2
BraA03t15215Z Brassica rapa HOM05D003596 ORTHO05D004256 1.8e-13 80.1 182 30.2
MBI05_g21324_MAGBIO Magnolia biondii HOM05D002132 ORTHO05D002168 1.8e-13 80.1 75 56.0
Potri.018G060000 Populus trichocarpa HOM05D003596 ORTHO05D004256 1.8e-13 80.1 185 29.7
PSO386G0153 Papaver somniferum HOM05D003596 ORTHO05D004256 3.1e-13 79.3 196 27.6
PSO384G1072 Papaver somniferum HOM05D003596 ORTHO05D004256 4.0e-13 79.0 193 28.5
HPP92_024003 Vanilla planifolia HOM05D003596 ORTHO05D004256 4.0e-13 79.0 185 30.3
AL7G18450 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 6.9e-13 78.2 189 28.0
MBI05_g18185_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 6.9e-13 78.2 83 50.6
Medtr3g104740 Medicago truncatula HOM05D003596 ORTHO05D004256 6.9e-13 78.2 195 29.2
Psat5g035440 Pisum sativum HOM05D003596 ORTHO05D004256 6.9e-13 78.2 196 30.6
Psat5g131440 Pisum sativum HOM05D003596 ORTHO05D004256 6.9e-13 78.2 196 30.6
ClCG05G018100 Citrullus lanatus HOM05D003596 ORTHO05D004256 9.0e-13 77.8 206 28.2
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 9.0e-13 77.8 192 27.6
AagrBONN_evm.TU.Sc2ySwM_117.2988 Anthoceros agrestis HOM05D003596 ORTHO05D004256 1.2e-12 77.4 199 32.7
Carub.0007s0734 Capsella rubella HOM05D003596 ORTHO05D004256 1.2e-12 77.4 189 28.0
MBI11_g17711_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.2e-12 77.4 198 27.3
Zm00001eb224980 Zea mays HOM05D003596 ORTHO05D004256 2.0e-12 76.6 187 27.8
CiPaw.15G035100 Carya illinoinensis HOM05D003596 ORTHO05D004256 2.6e-12 76.3 167 30.5
AT4G33120 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 5.8e-12 75.1 189 28.6
unitig_748.g7532 Utricularia gibba HOM05D003596 ORTHO05D004256 7.6e-12 74.7 195 29.2
AT4G33110 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 1.3e-11 73.9 189 27.5
CARHR241140 Cardamine hirsuta HOM05D003596 ORTHO05D004256 1.7e-11 73.6 185 28.1
CDE02G2104 Ceratophyllum demersum HOM05D003596 ORTHO05D004256 1.7e-11 73.6 116 35.3
ClCG05G018110 Citrullus lanatus HOM05D003596 ORTHO05D004256 2.9e-11 72.8 159 31.4
PSO339G1340 Papaver somniferum HOM05D003596 ORTHO05D004256 2.9e-11 72.8 190 31.6
Zm00001eb045600 Zea mays HOM05D003596 ORTHO05D004256 2.9e-11 72.8 187 27.3
CiPaw.15G035400 Carya illinoinensis HOM05D003596 ORTHO05D004256 3.8e-11 72.4 150 32.0
Aqoxy7G03911 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 2.4e-10 69.7 97 40.2
PSO675G3982 Papaver somniferum HOM05D003596 ORTHO05D004256 4.2e-10 68.9 191 28.8
PSO675G8489 Papaver somniferum HOM05D003596 ORTHO05D004256 4.2e-10 68.9 191 28.8
SMO271G0076 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 5.4e-10 68.6 184 29.3
PSO229G0119 Papaver somniferum HOM05D003596 ORTHO05D004256 1.6e-09 67.0 191 28.3
PSO832G1397 Papaver somniferum HOM05D003596 ORTHO05D004256 2.7e-09 66.2 158 31.0
SMO111G0057 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 1.0e-08 64.3 170 27.1
MBI04_g31166_MAGBIO Magnolia biondii HOM05D007189 ORTHO05D241639 1.3e-08 63.9 33 78.8
Nitab4.5_0006016g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 1.8e-08 63.5 148 29.1
Lj8A493G26 Lonicera japonica HOM05D003596 ORTHO05D004256 2.3e-08 63.2 113 29.2
CSS0026815 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 5.1e-08 62.0 88 42.0
Dinv12458 Davidia involucrata HOM05D003596 ORTHO05D004256 5.1e-08 62.0 76 43.4
Ca_15847_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 6.7e-08 61.6 117 31.6
Lj8C494T3 Lonicera japonica HOM05D003596 ORTHO05D004256 6.7e-08 61.6 160 28.8
Pp3c17_22760 Physcomitrium patens HOM05D003596 ORTHO05D004256 6.7e-08 61.6 184 26.1
Sopen08g018090 Solanum pennellii HOM05D003596 ORTHO05D004256 6.7e-08 61.6 155 29.0
Hma1.2p1_0732F.1_g210080 Hydrangea macrophylla HOM05D003596 ORTHO05D004256 1.1e-07 60.8 78 43.6
BolC7t46392H Brassica oleracea HOM05D003596 ORTHO05D004256 3.3e-07 59.3 78 41.0
Aa31LG7G10170 Aethionema arabicum HOM05D003596 ORTHO05D004256 5.6e-07 58.5 137 27.0
Mapoly0103s0018 Marchantia polymorpha HOM05D003596 ORTHO05D004256 5.6e-07 58.5 189 26.5
Oeu018037.2 Olea europaea HOM05D003596 ORTHO05D004256 7.4e-07 58.2 88 38.6
SMO358G0603 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 7.4e-07 58.2 160 27.5
SMO115G0275 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 9.6e-07 57.8 190 25.8
MBI05_g21325_MAGBIO Magnolia biondii HOM05D007189 ORTHO05D241854 1.6e-06 57.0 92 42.4
MBI12_g10638_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 2.1e-06 56.6 88 37.5
Aqoxy7G02483 Aquilegia oxysepala HOM05D003596 ORTHO05D031267 6.2e-06 55.1 79 43.0


User provided reference genes

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