Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g33748_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D241132 3.6e-82 308.1 152 100.0
Atru.chr6.1288 Acer truncatum HOM05D000003 ORTHO05D000004 7.8e-08 61.2 129 34.1
Lj6g0015390 Lotus japonicus HOM05D000003 ORTHO05D000004 1.7e-07 60.1 93 43.0
Oeu044182.1 Olea europaea HOM05D000003 ORTHO05D000004 1.7e-07 60.1 76 48.7
PSO170G0097 Papaver somniferum HOM05D000003 ORTHO05D000004 2.3e-07 59.7 135 33.3
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 2.3e-07 59.7 68 48.5
CSS0046528 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.9e-07 58.9 88 44.3
Atru.chr10.299 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-07 58.5 86 44.2
MBI17_g20226_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.0e-07 58.5 68 52.9
MBI09_g09410_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.6e-07 58.2 76 46.1
PSO339G1835 Papaver somniferum HOM05D000003 ORTHO05D000004 6.6e-07 58.2 65 47.7
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 6.6e-07 58.2 76 44.7
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 6.6e-07 58.2 76 44.7
Rhsim02G0009200 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.6e-07 58.2 66 53.0
QL06p003549 Quercus lobata HOM05D004938 ORTHO05D006035 8.6e-07 57.8 83 39.8
Atru.chr13.1937 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 57.4 76 40.8
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-06 57.4 80 43.8
ECA247G3322 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-06 57.4 130 35.4
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 1.1e-06 57.4 55 52.7
Atru.chr1.2944 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 57.0 76 46.1
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 57.0 82 43.9
Oeu000958.1 Olea europaea HOM05D000412 ORTHO05D000429 1.5e-06 57.0 76 46.1
QL01p046391 Quercus lobata HOM05D000554 ORTHO05D000860 1.9e-06 56.6 64 46.9
QL09p018207 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-06 56.6 55 52.7
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 1.9e-06 56.6 65 49.2
CBR_g32157 Chara braunii HOM05D000003 ORTHO05D000004 2.5e-06 56.2 128 37.5
CBR_g42124 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-06 56.2 78 46.2
MBI08_g39703_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.5e-06 56.2 76 50.0
MBI14_g42848_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.5e-06 56.2 51 58.8
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-06 56.2 89 38.2
Atru.chr1.1363 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 55.8 80 42.5
CSS0015339 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-06 55.8 88 40.9
MBI05_g34747_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.3e-06 55.8 76 47.4
Oeu007456.1 Olea europaea HOM05D000003 ORTHO05D000006 3.3e-06 55.8 76 46.1
Oeu038378.2 Olea europaea HOM05D000003 ORTHO05D001174 3.3e-06 55.8 55 52.7
TPR.G31234 Trifolium pratense HOM05D000003 ORTHO05D000004 3.3e-06 55.8 59 47.5
CSS0031199 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-06 55.5 88 40.9
CBR_g32216 Chara braunii HOM05D000003 ORTHO05D000004 4.3e-06 55.5 52 50.0
MBI12_g01748_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.3e-06 55.5 59 52.5
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-06 55.5 55 49.1
QL08p057946 Quercus lobata HOM05D000269 ORTHO05D005780 4.3e-06 55.5 55 49.1
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 4.3e-06 55.5 65 49.2
SHI29190 Sapria himalayana HOM05D000003 ORTHO05D000004 4.3e-06 55.5 65 49.2
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 4.3e-06 55.5 65 49.2
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 4.3e-06 55.5 65 49.2
Atru.chr6.889 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 55.1 76 44.7
PSO170G0050 Papaver somniferum HOM05D000003 ORTHO05D000004 5.6e-06 55.1 55 49.1
Atru.chr3.1850 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-06 54.7 76 43.4
PSO104G0163 Papaver somniferum HOM05D000003 ORTHO05D000004 7.3e-06 54.7 52 55.8
Prupe.2G060500 Prunus persica HOM05D000003 ORTHO05D000004 7.3e-06 54.7 59 54.2
QL09p047247 Quercus lobata HOM05D000003 ORTHO05D001231 7.3e-06 54.7 55 50.9
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 7.3e-06 54.7 76 42.1
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 7.3e-06 54.7 69 52.2
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.3e-06 54.7 69 52.2
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.3e-06 54.7 69 52.2
Sed0012288 Sechium edule HOM05D000003 ORTHO05D000004 7.3e-06 54.7 89 39.3
CSS0007093 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-06 54.3 76 43.4
Nn2g14311 Nelumbo nucifera HOM05D000003 ORTHO05D000004 9.5e-06 54.3 78 44.9
PSO339G3240 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-06 54.3 50 52.0
PSO384G1525 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-06 54.3 76 43.4
PSO729G0003 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-06 54.3 55 47.3
Prupe.3G120300 Prunus persica HOM05D000003 ORTHO05D000004 9.5e-06 54.3 76 40.8
Prupe.6G087800 Prunus persica HOM05D000003 ORTHO05D000004 9.5e-06 54.3 59 52.5
SHI54645 Sapria himalayana HOM05D000003 ORTHO05D000004 9.5e-06 54.3 83 38.6
Sopen06g010980 Solanum pennellii HOM05D000003 ORTHO05D000004 9.5e-06 54.3 76 46.1
TPR.G31104 Trifolium pratense HOM05D000003 ORTHO05D000004 9.5e-06 54.3 101 35.6


User provided reference genes

Program Settings