Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 6.6e-157 557.4 289 100.0
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 2.2e-27 127.1 323 36.5
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 2.9e-27 126.7 285 38.2
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 2.0e-20 104.0 298 33.9
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 7.6e-20 102.1 303 33.3
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 8.3e-19 98.6 347 30.8
ATR0810G253 Amborella trichopoda HOM05D040963 ORTHO05D026577 2.4e-18 97.1 317 33.8
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 5.4e-18 95.9 278 34.9
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 9.2e-18 95.1 290 32.1
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 3.5e-17 93.2 213 35.7
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 2.3e-16 90.5 307 32.6
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 1.1e-15 88.2 290 32.8
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 1.5e-15 87.8 296 31.8
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 4.3e-15 86.3 292 30.1
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 9.6e-15 85.1 299 30.8
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 2.1e-14 84.0 281 31.3
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 2.8e-14 83.6 326 30.4
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 2.8e-14 83.6 303 31.7
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 6.2e-14 82.4 284 31.3
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 6.2e-14 82.4 296 32.1
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 4.0e-13 79.7 298 28.9
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 5.2e-13 79.3 322 30.4
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 6.8e-13 79.0 288 30.9
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 7.6e-12 75.5 302 30.1
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 9.9e-12 75.1 310 31.0
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 9.9e-12 75.1 290 31.0
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 1.7e-11 74.3 277 32.9
SEGI_23580 Sequoiadendron giganteum HOM05D040963 ORTHO05D026577 2.2e-11 73.9 306 29.7
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 2.9e-11 73.6 295 25.8
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 4.9e-11 72.8 269 30.1
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 8.4e-11 72.0 230 32.6
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 1.1e-10 71.6 279 29.4
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 1.4e-10 71.2 300 29.3
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 2.4e-10 70.5 157 33.8
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 2.4e-10 70.5 314 29.3
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 3.2e-10 70.1 304 28.6
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 7.1e-10 68.9 299 31.1
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 1.2e-09 68.2 320 31.2
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 1.6e-09 67.8 300 30.3
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 1.6e-09 67.8 301 29.6
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 2.7e-09 67.0 284 29.6
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 6.0e-09 65.9 294 27.2
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 6.0e-09 65.9 136 38.2
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 1.0e-08 65.1 306 28.4
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 1.0e-08 65.1 225 32.0
PSO700G0198 Papaver somniferum HOM05D063576 ORTHO05D008337 1.3e-08 64.7 321 29.3
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 1.3e-08 64.7 299 30.4
Ca_13430_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 3.0e-08 63.5 293 28.3
PSO170G4597 Papaver somniferum HOM05D063576 ORTHO05D008337 3.9e-08 63.2 312 29.5
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 5.1e-08 62.8 306 27.8
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 5.1e-08 62.8 301 29.9
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 5.1e-08 62.8 126 37.3
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 6.6e-08 62.4 274 29.9
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 6.6e-08 62.4 304 30.3
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 8.7e-08 62.0 173 34.1
GSVIVG01009911001 Vitis vinifera HOM05D007760 ORTHO05D008337 1.9e-07 60.8 116 37.9
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 4.3e-07 59.7 323 28.2
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 4.3e-07 59.7 304 28.9
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 5.6e-07 59.3 326 28.2
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 7.3e-07 58.9 127 35.4
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 2.1e-06 57.4 302 27.5
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.1e-06 57.4 328 28.7
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.1e-06 57.4 327 27.5
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 2.1e-06 57.4 288 27.1
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 2.8e-06 57.0 293 27.3


User provided reference genes

Program Settings