Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g32463_MAGBIO Magnolia biondii HOM05D004280 ORTHO05D005059 3.3e-103 378.6 195 100.0
Nn7g35895 Nelumbo nucifera HOM05D004280 ORTHO05D005059 5.6e-71 271.6 195 75.9
Dinv23876 Davidia involucrata HOM05D004280 ORTHO05D005059 2.8e-70 269.2 195 73.8
Aqoxy7G03617 Aquilegia oxysepala HOM05D004280 ORTHO05D005059 1.8e-69 266.5 151 87.4
TAR623G1159 Trochodendron aralioides HOM05D004280 ORTHO05D005059 4.4e-68 261.9 170 78.8
MSTRG.18872 Avicennia marina HOM05D004280 ORTHO05D005059 5.8e-68 261.5 195 71.8
CSS0019544 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 9.9e-68 260.8 195 73.8
TPR.G24159 Trifolium pratense HOM05D004280 ORTHO05D005059 8.4e-67 257.7 196 70.9
Manes.01G036600 Manihot esculenta HOM05D004280 ORTHO05D005059 1.1e-66 257.3 195 69.7
DCAR_009024 Daucus carota HOM05D004280 ORTHO05D005059 2.7e-65 252.7 195 71.8
GSVIVG01025433001 Vitis vinifera HOM05D004280 ORTHO05D005059 3.5e-65 252.3 145 86.9
Cpa.g.sc119.63 Carica papaya HOM05D004280 ORTHO05D005059 6.0e-65 251.5 192 69.8
ATR0681G021 Amborella trichopoda HOM05D004280 ORTHO05D005059 7.8e-65 251.1 196 73.0
MELO3C021620.2 Cucumis melo HOM05D004280 ORTHO05D005059 1.3e-64 250.4 195 68.7
Lj2A726G7 Lonicera japonica HOM05D004280 ORTHO05D005059 1.3e-64 250.4 196 70.9
Hma1.2p1_0843F.1_g227335 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 2.3e-64 249.6 195 70.3
Hma1.2p1_0843F.1_g227340 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 2.3e-64 249.6 195 70.3
CSS0019811 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 3.9e-64 248.8 195 70.8
SalBow6G7108 Salvia bowleyana HOM05D004280 ORTHO05D005059 5.1e-64 248.4 195 67.7
vmacro00623 Vaccinium macrocarpon HOM05D004280 ORTHO05D005059 6.6e-64 248.1 155 83.2
CsaV3_5G026740 Cucumis sativus L. HOM05D004280 ORTHO05D005059 8.7e-64 247.7 195 67.7
FAN16G1471 Fragaria x ananassa HOM05D004280 ORTHO05D005059 1.1e-63 247.3 202 65.3
Cc01_g00630 Coffea canephora HOM05D004280 ORTHO05D005059 1.5e-63 246.9 154 82.5
PGR102G2828 Punica granatum HOM05D004280 ORTHO05D005059 1.9e-63 246.5 195 66.7
RhsimUnG0194900 Rhododendron simsii HOM05D004280 ORTHO05D005059 1.9e-63 246.5 196 70.4
SalBow4G3146 Salvia bowleyana HOM05D004280 ORTHO05D005059 1.9e-63 246.5 218 63.8
Ca_16394_v3 Cicer arietinum L. HOM05D004280 ORTHO05D005059 2.5e-63 246.1 196 66.3
ECA233G4188 Erigeron canadensis HOM05D004280 ORTHO05D005059 2.5e-63 246.1 195 68.2
Glyma.06G309800 Glycine max HOM05D004280 ORTHO05D005059 2.5e-63 246.1 196 69.4
Glyma.14G130400 Glycine max HOM05D004280 ORTHO05D005059 2.5e-63 246.1 196 69.4
Rhsim09G0027500 Rhododendron simsii HOM05D004280 ORTHO05D005059 2.5e-63 246.1 196 70.4
FvH4_3g45340 Fragaria vesca HOM05D004280 ORTHO05D005059 4.3e-63 245.4 195 67.2
Medtr3g083880 Medicago truncatula HOM05D004280 ORTHO05D005059 5.6e-63 245.0 194 68.0
Cc05_g01230 Coffea canephora HOM05D004280 ORTHO05D005059 9.6e-63 244.2 154 81.2
Glyma.14G154000 Glycine max HOM05D004280 ORTHO05D005059 9.6e-63 244.2 196 68.9
Lj6g0003060 Lotus japonicus HOM05D004280 ORTHO05D005059 9.6e-63 244.2 196 67.3
Potri.001G006300 Populus trichocarpa HOM05D004280 ORTHO05D005059 9.6e-63 244.2 195 66.2
Sed0023881 Sechium edule HOM05D004280 ORTHO05D005059 9.6e-63 244.2 158 79.7
Ciclev10016632m.g Citrus clementina HOM05D004280 ORTHO05D005059 1.3e-62 243.8 195 67.2
Migut.D02547 Erythranthe guttata HOM05D004280 ORTHO05D005059 1.3e-62 243.8 196 68.4
arahy.Tifrunner.gnm1.ann1.0AF3IJ Arachis hypogaea HOM05D004280 ORTHO05D005059 2.8e-62 242.7 159 79.9
ClCG09G019650 Citrullus lanatus HOM05D004280 ORTHO05D005059 2.8e-62 242.7 210 65.2
QL01p008475 Quercus lobata HOM05D004280 ORTHO05D005059 2.8e-62 242.7 197 67.5
unitig_749.g13584 Utricularia gibba HOM05D004280 ORTHO05D005059 2.8e-62 242.7 149 82.6
CiPaw.13G175600 Carya illinoinensis HOM05D004280 ORTHO05D005059 3.6e-62 242.3 197 68.0
FAN25G1542 Fragaria x ananassa HOM05D004280 ORTHO05D005059 3.6e-62 242.3 150 80.7
CiPaw.16G086400 Carya illinoinensis HOM05D004280 ORTHO05D005059 6.2e-62 241.5 197 67.5
Thecc.09G208500 Theobroma cacao HOM05D004280 ORTHO05D005059 8.1e-62 241.1 147 80.3
HPP92_017297 Vanilla planifolia HOM05D004280 ORTHO05D005059 8.1e-62 241.1 164 75.6
Phvul.001G056600 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 1.1e-61 240.7 148 81.8
HanXRQChr13g0405321 Helianthus annuus HOM05D004280 ORTHO05D005059 1.4e-61 240.4 150 83.3
SGA_v2.0_scaffold13G06338 Striga asiatica HOM05D004280 ORTHO05D005059 1.4e-61 240.4 150 85.3
Solyc04g076580.4 Solanum lycopersicum HOM05D004280 ORTHO05D005059 1.8e-61 240.0 192 68.2
CAN.G193.6 Capsicum annuum HOM05D004280 ORTHO05D005059 2.4e-61 239.6 149 81.9
Haze_22962 Corylus avellana HOM05D004280 ORTHO05D005059 2.4e-61 239.6 197 67.0
FAN11G0747 Fragaria x ananassa HOM05D004280 ORTHO05D005059 2.4e-61 239.6 150 80.0
Gorai.004G017100 Gossypium raimondii HOM05D004280 ORTHO05D005059 2.4e-61 239.6 162 74.7
Sabra01G0004700 Salix brachista HOM05D004280 ORTHO05D005059 2.4e-61 239.6 195 66.7
TWI60G1521 Tripterygium wilfordii HOM05D004280 ORTHO05D005059 3.1e-61 239.2 195 65.1
Glyma.11G173655 Glycine max HOM05D004280 ORTHO05D005059 5.3e-61 238.4 197 68.5
Psat5g102320 Pisum sativum HOM05D004280 ORTHO05D005059 5.3e-61 238.4 197 65.5
Haze_22956 Corylus avellana HOM05D004280 ORTHO05D005059 9.0e-61 237.7 197 66.5
Duzib170G0536 Durio zibethinus HOM05D004280 ORTHO05D005059 9.0e-61 237.7 194 64.9
Potri.003G218700 Populus trichocarpa HOM05D004280 ORTHO05D005059 9.0e-61 237.7 195 64.6
Gohir.D08G021800 Gossypium hirsutum HOM05D004280 ORTHO05D005059 1.5e-60 236.9 194 64.4
Manes.04G095700 Manihot esculenta HOM05D004280 ORTHO05D005059 1.5e-60 236.9 192 65.6
Peaxi162Scf01112g00112 Petunia axillaris HOM05D004280 ORTHO05D005059 1.5e-60 236.9 149 79.9
Rhsim02G0077200 Rhododendron simsii HOM05D004280 ORTHO05D005059 1.5e-60 236.9 156 78.8
Sabra03G0163100 Salix brachista HOM05D004280 ORTHO05D005059 1.5e-60 236.9 158 75.3
Gohir.A08G011300 Gossypium hirsutum HOM05D004280 ORTHO05D005059 2.0e-60 236.5 147 78.2
Atru.chr1.3614 Acer truncatum HOM05D004280 ORTHO05D005059 7.6e-60 234.6 195 64.6
ECA248G0362 Erigeron canadensis HOM05D004280 ORTHO05D005059 7.6e-60 234.6 195 66.7
Lsat_1_v5_gn_1_67700 Lactuca sativa HOM05D004280 ORTHO05D005059 7.6e-60 234.6 147 81.6
PSO210G5203 Papaver somniferum HOM05D004280 ORTHO05D005059 7.6e-60 234.6 196 66.3
PSO761G0405 Papaver somniferum HOM05D004280 ORTHO05D005059 7.6e-60 234.6 196 66.3
VMungo0647G2277 Vigna mungo HOM05D004280 ORTHO05D005059 7.6e-60 234.6 196 66.8
Prupe.6G007100 Prunus persica HOM05D004280 ORTHO05D005059 9.9e-60 234.2 190 64.7
Hund03769 Selenicereus undatus HOM05D004280 ORTHO05D005059 9.9e-60 234.2 158 79.1
PGSC0003DMG401025662 Solanum tuberosum HOM05D004280 ORTHO05D005059 9.9e-60 234.2 153 80.4
Sc10g0001010 Simmondsia chinensis HOM05D004280 ORTHO05D005059 2.2e-59 233.0 195 67.2
CANSAT01G2556 Cannabis sativa HOM05D004280 ORTHO05D005059 4.9e-59 231.9 198 64.1
RcHm_v2.0_Chr4g0431981 Rosa chinensis HOM05D004280 ORTHO05D005059 1.4e-58 230.3 145 80.0
RcHm_v2.0_Chr5g0083141 Rosa chinensis HOM05D004280 ORTHO05D005059 1.4e-58 230.3 145 80.0
Duzib150G0115 Durio zibethinus HOM05D004280 ORTHO05D005059 2.4e-58 229.6 191 64.9
SEGI_26181 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 2.4e-58 229.6 195 63.1
Aa31LG10G1060 Aethionema arabicum HOM05D004280 ORTHO05D005059 1.2e-57 227.3 147 74.8
Eucgr.B03612 Eucalyptus grandis HOM05D004280 ORTHO05D005059 2.1e-57 226.5 149 79.2
MD03G1005700 Malus domestica HOM05D004280 ORTHO05D005059 2.1e-57 226.5 160 71.9
MD11G1008600 Malus domestica HOM05D004280 ORTHO05D005059 2.1e-57 226.5 156 72.4
Thhalv10011786m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 2.7e-57 226.1 147 76.2
COL.COLO4_35029 Corchorus olitorius HOM05D004280 ORTHO05D005059 3.5e-57 225.7 191 66.0
Mapoly0011s0044 Marchantia polymorpha HOM05D004280 ORTHO05D005059 4.6e-57 225.3 193 62.7
AT1G55300 Arabidopsis thaliana HOM05D004280 ORTHO05D005059 1.7e-56 223.4 146 75.3
THA.LOC104822674 Tarenaya hassleriana HOM05D004280 ORTHO05D005059 1.7e-56 223.4 147 74.8
FAN21G3004 Fragaria x ananassa HOM05D004280 ORTHO05D005059 2.3e-56 223.0 148 76.4
Os05g0347000 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 3.0e-56 222.6 145 79.3
CARHR044950 Cardamine hirsuta HOM05D004280 ORTHO05D005059 5.1e-56 221.9 147 74.1
BolC6t36098H Brassica oleracea HOM05D004280 ORTHO05D005059 6.6e-56 221.5 146 74.7
BolC6t36783H Brassica oleracea HOM05D004280 ORTHO05D005059 8.7e-56 221.1 148 73.6
Lsat_1_v5_gn_6_54260 Lactuca sativa HOM05D004280 ORTHO05D005059 8.7e-56 221.1 150 76.0
BcaB02g10831 Brassica carinata HOM05D004280 ORTHO05D005059 1.5e-55 220.3 142 76.1
C06p10250 Brassica napus HOM05D004280 ORTHO05D005059 1.5e-55 220.3 145 74.5
C06p15910 Brassica napus HOM05D004280 ORTHO05D005059 1.5e-55 220.3 147 72.8
SGA_v2.0_scaffold329G48825 Striga asiatica HOM05D004280 ORTHO05D005059 1.9e-55 219.9 139 84.9
SGA_v2.0_scaffold552G52891 Striga asiatica HOM05D004280 ORTHO05D005059 1.9e-55 219.9 139 84.9
SGA_v2.0_scaffold693G53465 Striga asiatica HOM05D004280 ORTHO05D005059 1.9e-55 219.9 139 84.9
AagrBONN_evm.TU.Sc2ySwM_344.2640 Anthoceros agrestis HOM05D004280 ORTHO05D005059 2.5e-55 219.5 151 70.9
BcaC08g44186 Brassica carinata HOM05D004280 ORTHO05D005059 2.5e-55 219.5 147 73.5
Carub.0001s4380 Capsella rubella HOM05D004280 ORTHO05D005059 3.3e-55 219.2 196 62.2
Ah.04g157750 Amaranthus hybridus HOM05D004280 ORTHO05D005059 5.6e-55 218.4 205 60.5
A06p00280 Brassica napus HOM05D004280 ORTHO05D005059 5.6e-55 218.4 145 73.8
BraA06t23245Z Brassica rapa HOM05D004280 ORTHO05D005059 5.6e-55 218.4 145 73.8
SEGI_04342 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 5.6e-55 218.4 151 72.8
Sp1g40960 Schrenkiella parvula HOM05D004280 ORTHO05D005059 7.4e-55 218.0 147 73.5
Zm00001eb233380 Zea mays HOM05D004280 ORTHO05D005059 9.6e-55 217.6 143 77.6
SGA_v2.0_scaffold738G53541 Striga asiatica HOM05D004280 ORTHO05D005059 1.6e-54 216.9 139 83.5
BraA05t20650Z Brassica rapa HOM05D004280 ORTHO05D005059 3.1e-53 212.6 142 73.9
Lalb_Chr08g0230321 Lupinus albus HOM05D004280 ORTHO05D005059 5.3e-53 211.8 166 69.3
Ah.04g157660 Amaranthus hybridus HOM05D004280 ORTHO05D005059 9.0e-53 211.1 205 58.5
Pp3c1_41986 Physcomitrium patens HOM05D004280 ORTHO05D005059 9.0e-53 211.1 146 72.6
Zm00001eb059570 Zea mays HOM05D004280 ORTHO05D005059 1.2e-52 210.7 148 73.6
Pp3c14_18710 Physcomitrium patens HOM05D004280 ORTHO05D005059 2.6e-52 209.5 151 68.2
A05p17570 Brassica napus HOM05D004280 ORTHO05D005059 3.4e-52 209.1 147 71.4
SGA_v2.0_scaffold521G52700 Striga asiatica HOM05D004280 ORTHO05D005059 4.5e-52 208.8 155 76.1
SGA_v2.0_scaffold674G53431 Striga asiatica HOM05D004280 ORTHO05D005059 4.5e-52 208.8 155 76.1
Zm00001eb395740 Zea mays HOM05D004280 ORTHO05D005059 2.9e-51 206.1 149 71.1
CBR_g22380 Chara braunii HOM05D004280 ORTHO05D005059 2.4e-50 203.0 183 58.5
HanXRQChr01g0021661 Helianthus annuus HOM05D004280 ORTHO05D005059 2.4e-50 203.0 123 82.9
AUR62015306 Chenopodium quinoa HOM05D004280 ORTHO05D005059 9.3e-50 201.1 195 59.5
AUR62032745 Chenopodium quinoa HOM05D004280 ORTHO05D005059 9.3e-50 201.1 125 80.0
SGA_v2.0_scaffold674G53436 Striga asiatica HOM05D004280 ORTHO05D005059 1.2e-49 200.7 155 73.5
Zm00001eb068820 Zea mays HOM05D004280 ORTHO05D005059 3.9e-48 195.7 143 73.4
Os01g0648500 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 5.1e-48 195.3 134 75.4
Oeu059672.2 Olea europaea HOM05D004280 ORTHO05D005059 7.4e-47 191.4 123 78.9
Cc01_g02840 Coffea canephora HOM05D004280 ORTHO05D005059 6.2e-46 188.3 154 68.2
PGSC0003DMG400009351 Solanum tuberosum HOM05D004280 ORTHO05D005059 8.1e-46 188.0 190 57.9
SMO169G0010 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 3.1e-45 186.0 157 61.1
SGA_v2.0_scaffold2280G54098 Striga asiatica HOM05D004280 ORTHO05D005059 1.3e-43 180.6 111 83.8
SMO146G0138 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 6.5e-43 178.3 150 60.0
Nitab4.5_0000131g0050 Nicotiana tabacum HOM05D004280 ORTHO05D005059 7.9e-41 171.4 158 59.5
Phvul.001G056500 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 5.1e-40 168.7 149 61.1
Sed0016974 Sechium edule HOM05D004280 ORTHO05D005059 1.9e-39 166.8 145 60.7
Cc00_g23960 Coffea canephora HOM05D004280 ORTHO05D005059 1.6e-38 163.7 140 63.6
Cfa009582 Carpinus fangiana HOM05D004280 ORTHO05D005059 2.1e-38 163.3 216 49.1
Haze_22967 Corylus avellana HOM05D004280 ORTHO05D005059 3.7e-38 162.5 106 77.4
AL1G63340 Arabidopsis lyrata HOM05D004280 ORTHO05D005059 4.8e-38 162.2 101 76.2
Actinidia11301 Actinidia chinensis HOM05D004280 ORTHO05D005059 1.3e-35 154.1 90 86.7
Dinv13451 Davidia involucrata HOM05D004280 ORTHO05D005059 2.2e-35 153.3 93 83.9
SGA_v2.0_scaffold6G03409 Striga asiatica HOM05D004280 ORTHO05D005059 3.8e-35 152.5 149 57.7
Nitab4.5_0006954g0010 Nicotiana tabacum HOM05D004280 ORTHO05D005059 1.6e-30 137.1 136 57.4
Glyma.17G202802 Glycine max HOM05D004280 ORTHO05D005059 3.1e-29 132.9 82 79.3
Zm00001eb211560 Zea mays HOM05D004280 ORTHO05D005059 7.7e-28 128.3 150 54.7
Sopen00g013070 Solanum pennellii HOM05D004280 ORTHO05D005059 2.1e-25 120.2 112 60.7
Atru.chr7.1077 Acer truncatum HOM05D004280 ORTHO05D005059 7.9e-25 118.2 132 54.5
AagrBONN_evm.TU.Sc2ySwM_362.2805 Anthoceros agrestis HOM05D004280 ORTHO05D005059 1.2e-20 104.4 96 53.1
Cre01.g011200 Chlamydomonas reinhardtii HOM05D004280 ORTHO05D005059 1.2e-20 104.4 140 38.6
Cc00_g20490 Coffea canephora HOM05D004280 ORTHO05D005059 8.5e-19 98.2 107 54.2
PRCOL_00003189 Prasinoderma coloniale HOM05D004280 ORTHO05D005059 3.3e-15 86.3 164 32.3
EL10Ac4g09635 Beta vulgaris HOM05D004280 ORTHO05D005059 3.8e-11 72.8 77 55.8
unitig_26.g9445 Utricularia gibba HOM05D004280 ORTHO05D005059 5.5e-10 68.9 91 50.5
Cfa024345 Carpinus fangiana HOM05D004280 ORTHO05D122617 1.2e-09 67.8 175 29.7
Thhalv10012232m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 1.4e-08 64.3 68 55.9
Sopen04g030300 Solanum pennellii HOM05D004280 ORTHO05D005059 1.3e-06 57.8 39 76.9


User provided reference genes

Program Settings