Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 0.0e+00 1363.6 720 100.0
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 2.5e-96 357.5 692 43.6
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 1.5e-85 321.6 765 37.5
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 2.6e-85 320.9 780 38.2
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.7e-84 318.2 797 37.0
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 2.2e-84 317.8 776 37.9
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 2.7e-82 310.8 739 38.8
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 2.9e-81 307.4 659 39.2
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.4e-78 298.5 677 39.1
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 3.9e-73 280.4 787 34.9
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 5.0e-73 280.0 813 34.6
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 1.8e-70 271.6 794 34.6
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 3.1e-70 270.8 795 35.2
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 3.4e-69 267.3 721 38.0
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.7e-68 265.0 821 34.5
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.4e-67 261.9 725 35.3
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 4.6e-66 256.9 819 33.7
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 6.6e-65 253.1 714 34.5
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 7.3e-64 249.6 823 34.3
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 3.6e-63 247.3 741 33.5
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.2e-63 246.5 806 34.0
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 6.2e-63 246.5 804 34.3
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.0e-61 241.5 790 33.5
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 3.0e-57 227.6 813 32.0
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 2.5e-56 224.6 746 33.2
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.2e-55 222.2 719 33.8
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.6e-55 221.9 662 35.6
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 2.8e-55 221.1 751 33.3
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.7e-52 211.8 745 33.4
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 2.2e-52 211.5 710 32.7
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 9.2e-51 206.1 706 34.7
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 5.1e-49 200.3 761 33.4
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 1.1e-48 199.1 761 32.2
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 1.1e-48 199.1 747 33.6
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 1.9e-48 198.4 768 32.7
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 4.3e-48 197.2 775 30.8
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.1e-46 192.6 728 31.2
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.4e-46 192.2 775 31.7
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.4e-46 191.4 806 31.1
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 5.3e-46 190.3 709 32.3
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 3.4e-45 187.6 769 33.8
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.3e-44 185.7 806 31.5
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.3e-44 185.7 805 31.7
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 4.3e-40 170.6 759 29.6
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 7.3e-40 169.9 754 30.5
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 2.1e-39 168.3 698 30.4
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 3.6e-39 167.5 739 28.7
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 4.8e-39 167.2 769 30.8
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 8.1e-39 166.4 759 30.4
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 4.0e-38 164.1 734 30.9
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 1.5e-37 162.2 736 30.8
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 9.9e-37 159.5 721 29.1
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 8.4e-36 156.4 572 33.4
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.4e-35 154.8 551 34.3
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 4.2e-35 154.1 188 52.1
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 7.1e-35 153.3 291 40.2
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 2.7e-34 151.4 738 29.9
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 1.8e-33 148.7 715 29.9
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 5.1e-33 147.1 707 29.6
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 3.3e-32 144.4 721 29.3
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 2.1e-31 141.7 686 28.6
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 2.8e-31 141.4 679 30.2
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 6.2e-31 140.2 731 29.4
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.8e-30 138.7 696 28.6
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.8e-30 138.7 675 29.8
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 6.9e-30 136.7 708 29.4
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 9.0e-30 136.3 672 29.0
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.0e-29 135.2 444 34.0
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 3.4e-29 134.4 687 29.3
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 5.8e-29 133.7 672 29.9
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 1.7e-28 132.1 318 37.7
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 2.2e-28 131.7 743 29.6
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 4.9e-28 130.6 300 37.0
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 8.4e-28 129.8 662 27.8
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 1.4e-27 129.0 215 44.7
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 1.9e-27 128.6 686 29.2
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 7.1e-27 126.7 682 27.9
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.6e-26 125.6 738 28.2
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 3.5e-26 124.4 634 28.4
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 6.0e-26 123.6 629 27.8
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 3.0e-25 121.3 662 28.1
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 6.7e-25 120.2 666 27.0
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.1e-24 119.4 731 26.7
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 4.3e-24 117.5 684 28.2
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 3.7e-23 114.4 543 28.4
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 3.1e-22 111.3 610 28.2
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 1.0e-20 106.3 706 26.3
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 1.7e-20 105.5 644 28.0
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 6.5e-20 103.6 545 29.0
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 6.5e-20 103.6 594 26.6
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 3.4e-13 81.3 421 27.6
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 3.4e-13 81.3 613 26.4
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.5e-12 77.0 113 46.0
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 9.4e-11 73.2 165 34.5
Atru.chr13.297 Acer truncatum HOM05D007378 ORTHO05D007577 3.6e-10 71.2 71 52.1
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 3.6e-10 71.2 648 24.5
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 2.3e-09 68.6 601 25.0
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 6.7e-09 67.0 667 25.5
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 2.0e-08 65.5 594 22.9
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 2.0e-08 65.5 526 24.0
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.0e-08 65.5 200 31.5
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 4.3e-08 64.3 102 43.1
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 7.4e-08 63.5 639 23.9
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 2.8e-07 61.6 86 45.3
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 3.7e-07 61.2 134 36.6
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 3.7e-07 61.2 572 24.5
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 1.4e-06 59.3 132 36.4
TAR381G0505 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.4e-06 59.3 104 50.0
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 2.4e-06 58.5 86 44.2
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 2.4e-06 58.5 498 25.3
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 5.3e-06 57.4 87 44.8


User provided reference genes

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