Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g28690_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D023760 8.8e-19 95.9 47 100.0
CSS0034039 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D006488 3.8e-14 80.5 46 87.0
Cfa000940 Carpinus fangiana HOM05D000147 ORTHO05D006488 8.5e-14 79.3 46 87.0
MBI07_g23223_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D006488 8.5e-14 79.3 46 87.0
Rhsim02G0157400 Rhododendron simsii HOM05D000540 ORTHO05D000681 2.5e-13 77.8 46 84.8
Actinidia19526 Actinidia chinensis HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
Actinidia39573 Actinidia chinensis HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
CiPaw.09G123200 Carya illinoinensis HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
Ca_18261_v3 Cicer arietinum L. HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
Haze_05607 Corylus avellana HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
DCAR_003917 Daucus carota HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
DCAR_007891 Daucus carota HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
Dinv32255 Davidia involucrata HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
ECA236G4896 Erigeron canadensis HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
HanXRQChr15g0480851 Helianthus annuus HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
Hma1.2p1_0020F.1_g013930 Hydrangea macrophylla HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
Lj4g0019400 Lotus japonicus HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
Oeu042448.2 Olea europaea HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
PSO541G4905 Papaver somniferum HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
PSO675G4870 Papaver somniferum HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
Psat7g089480 Pisum sativum HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
QL05p057968 Quercus lobata HOM05D000147 ORTHO05D006488 3.2e-13 77.4 46 84.8
Phvul.002G193200 Phaseolus vulgaris HOM05D000147 ORTHO05D006488 7.2e-13 76.3 46 82.6
Prupe.4G080800 Prunus persica HOM05D000147 ORTHO05D006488 7.2e-13 76.3 46 80.4
Cpa.g.sc246.6 Carica papaya HOM05D000147 ORTHO05D006488 1.2e-12 75.5 46 82.6
Duzib192G0441 Durio zibethinus HOM05D000147 ORTHO05D006488 1.2e-12 75.5 46 80.4
Glyma.05G130700 Glycine max HOM05D000147 ORTHO05D006488 1.2e-12 75.5 46 82.6
Glyma.08G085500 Glycine max HOM05D000147 ORTHO05D006488 1.2e-12 75.5 46 82.6
Lj1C1188T4 Lonicera japonica HOM05D000147 ORTHO05D006488 1.2e-12 75.5 46 82.6
Medtr4g096870 Medicago truncatula HOM05D000147 ORTHO05D006488 1.2e-12 75.5 46 82.6
TPR.G2955 Trifolium pratense HOM05D000147 ORTHO05D006488 1.2e-12 75.5 46 82.6
TWI09G0852 Tripterygium wilfordii HOM05D000147 ORTHO05D006488 1.2e-12 75.5 46 82.6
PGR042G2817 Punica granatum HOM05D000147 ORTHO05D006488 1.6e-12 75.1 46 80.4
SEGI_10279 Sequoiadendron giganteum HOM05D000147 ORTHO05D006488 1.6e-12 75.1 46 78.3
Solyc02g070440.3 Solanum lycopersicum HOM05D000147 ORTHO05D006488 1.6e-12 75.1 46 80.4
Sopen02g019530 Solanum pennellii HOM05D000147 ORTHO05D006488 1.6e-12 75.1 46 80.4
PGSC0003DMG400021168 Solanum tuberosum HOM05D000147 ORTHO05D006488 1.6e-12 75.1 46 80.4
TAR629G2297 Trochodendron aralioides HOM05D000147 ORTHO05D006488 1.6e-12 75.1 46 82.6
VMungo0251G2228 Vigna mungo HOM05D000147 ORTHO05D006488 1.6e-12 75.1 46 82.6
CDE02G1490 Ceratophyllum demersum HOM05D000147 ORTHO05D006488 2.7e-12 74.3 46 80.4
Cc00_g07790 Coffea canephora HOM05D000147 ORTHO05D006488 2.7e-12 74.3 46 80.4
Eucgr.D00296 Eucalyptus grandis HOM05D000147 ORTHO05D006488 2.7e-12 74.3 46 82.6
Lsat_1_v5_gn_7_28260 Lactuca sativa HOM05D000147 ORTHO05D006488 2.7e-12 74.3 46 80.4
CiPaw.10G091800 Carya illinoinensis HOM05D000147 ORTHO05D006488 3.6e-12 73.9 45 82.2
CDE02G3853 Ceratophyllum demersum HOM05D000147 ORTHO05D006488 3.6e-12 73.9 46 80.4
Lalb_Chr07g0188561 Lupinus albus HOM05D000147 ORTHO05D006488 3.6e-12 73.9 46 80.4
Lalb_Chr12g0209001 Lupinus albus HOM05D000147 ORTHO05D006488 3.6e-12 73.9 46 80.4
AL4G30530 Arabidopsis lyrata HOM05D000147 ORTHO05D006488 4.7e-12 73.6 44 81.8
AT2G34560 Arabidopsis thaliana HOM05D000147 ORTHO05D006488 4.7e-12 73.6 44 81.8
COL.COLO4_31070 Corchorus olitorius HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 78.3
Duzib235G0947 Durio zibethinus HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 78.3
Gohir.A06G137700 Gossypium hirsutum HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 78.3
Gohir.A10G040800 Gossypium hirsutum HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 78.3
Gohir.D06G142900 Gossypium hirsutum HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 78.3
Gohir.D10G041600 Gossypium hirsutum HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 78.3
Gorai.010G166700 Gossypium raimondii HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 78.3
Gorai.011G044000 Gossypium raimondii HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 78.3
PGR083G0222 Punica granatum HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 80.4
SGA_v2.0_scaffold106G30653 Striga asiatica HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 80.4
Thecc.06G150400 Theobroma cacao HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 78.3
vmacro10947 Vaccinium macrocarpon HOM05D000147 ORTHO05D006488 4.7e-12 73.6 46 78.3
CSS0041952 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D006488 6.1e-12 73.2 45 82.2
CARHR128650 Cardamine hirsuta HOM05D000147 ORTHO05D006488 6.1e-12 73.2 44 81.8
TAR626G1497 Trochodendron aralioides HOM05D000147 ORTHO05D006488 6.1e-12 73.2 45 82.2
ClCG01G024640 Citrullus lanatus HOM05D000147 ORTHO05D006488 8.0e-12 72.8 45 77.8
Nitab4.5_0000869g0030 Nicotiana tabacum HOM05D000147 ORTHO05D006488 8.0e-12 72.8 46 78.3
Nitab4.5_0008303g0010 Nicotiana tabacum HOM05D000147 ORTHO05D006488 8.0e-12 72.8 46 78.3
Sc17g0004910 Simmondsia chinensis HOM05D000147 ORTHO05D006488 8.0e-12 72.8 46 78.3
THA.LOC104813343 Tarenaya hassleriana HOM05D000147 ORTHO05D006488 8.0e-12 72.8 45 82.2
GSVIVG01021470001 Vitis vinifera HOM05D000147 ORTHO05D006488 8.0e-12 72.8 46 78.3
Carub.0004s1623 Capsella rubella HOM05D000147 ORTHO05D006488 1.0e-11 72.4 44 79.5
MD10G1261900 Malus domestica HOM05D000147 ORTHO05D006488 1.0e-11 72.4 46 78.3
arahy.Tifrunner.gnm1.ann1.4VL4ZD Arachis hypogaea HOM05D000147 ORTHO05D006488 1.4e-11 72.0 46 80.4
arahy.Tifrunner.gnm1.ann1.EJC028 Arachis hypogaea HOM05D000147 ORTHO05D006488 1.4e-11 72.0 46 80.4
MD05G1283700 Malus domestica HOM05D000147 ORTHO05D006488 1.4e-11 72.0 46 76.1
Manes.15G121700 Manihot esculenta HOM05D000147 ORTHO05D006488 1.4e-11 72.0 45 77.8
Os01g0673500 Oryza sativa ssp. japonica HOM05D000147 ORTHO05D006488 1.4e-11 72.0 46 78.3
Os01g0757400 Oryza sativa ssp. japonica HOM05D000147 ORTHO05D006488 1.4e-11 72.0 46 78.3
Zm00001eb152700 Zea mays HOM05D000147 ORTHO05D006488 1.4e-11 72.0 46 78.3
Zm00001eb360030 Zea mays HOM05D000147 ORTHO05D006488 1.4e-11 72.0 46 78.3
Atru.chr10.1224 Acer truncatum HOM05D000147 ORTHO05D006488 1.8e-11 71.6 45 80.0
Aa31LG10G6830 Aethionema arabicum HOM05D000147 ORTHO05D006488 1.8e-11 71.6 44 79.5
Aqoxy1G01702 Aquilegia oxysepala HOM05D000147 ORTHO05D006488 1.8e-11 71.6 45 80.0
BcaB01g06367 Brassica carinata HOM05D000147 ORTHO05D006488 1.8e-11 71.6 44 81.8
BcaB02g09530 Brassica carinata HOM05D000147 ORTHO05D006488 1.8e-11 71.6 44 81.8
BcaC02g11518 Brassica carinata HOM05D000147 ORTHO05D006488 1.8e-11 71.6 44 81.8
A03p19180 Brassica napus HOM05D000147 ORTHO05D006488 1.8e-11 71.6 44 81.8
C03p22380 Brassica napus HOM05D000147 ORTHO05D006488 1.8e-11 71.6 44 81.8
BolC3t14621H Brassica oleracea HOM05D000147 ORTHO05D006488 1.8e-11 71.6 44 81.8
BraA03t11173Z Brassica rapa HOM05D000147 ORTHO05D006488 1.8e-11 71.6 44 81.8
CAN.G660.24 Capsicum annuum HOM05D000147 ORTHO05D006488 1.8e-11 71.6 46 76.1
Ciclev10015142m.g Citrus clementina HOM05D000147 ORTHO05D006488 1.8e-11 71.6 45 80.0
Nn3g20781 Nelumbo nucifera HOM05D000147 ORTHO05D006488 1.8e-11 71.6 45 80.0
Nn4g26572 Nelumbo nucifera HOM05D000147 ORTHO05D006488 1.8e-11 71.6 45 80.0
Nitab4.5_0000420g0060 Nicotiana tabacum HOM05D000147 ORTHO05D006488 1.8e-11 71.6 46 78.3
Nitab4.5_0006887g0030 Nicotiana tabacum HOM05D000147 ORTHO05D006488 1.8e-11 71.6 46 78.3
Potri.004G065100 Populus trichocarpa HOM05D000147 ORTHO05D006488 1.8e-11 71.6 45 80.0
vmacro10952 Vaccinium macrocarpon HOM05D000147 ORTHO05D006488 1.8e-11 71.6 45 77.8
MSTRG.14775 Avicennia marina HOM05D000147 ORTHO05D006488 2.3e-11 71.2 46 76.1
Thhalv10016803m.g Eutrema salsugineum HOM05D000147 ORTHO05D006488 2.3e-11 71.2 44 79.5
Sp4g16820 Schrenkiella parvula HOM05D000147 ORTHO05D006488 2.3e-11 71.2 44 79.5
unitig_8.g4885 Utricularia gibba HOM05D000147 ORTHO05D006488 3.0e-11 70.9 46 76.1
FvH4_3g05520 Fragaria vesca HOM05D000147 ORTHO05D006488 4.0e-11 70.5 45 75.6
FAN11G0707 Fragaria x ananassa HOM05D000147 ORTHO05D006488 4.0e-11 70.5 45 75.6
FAN16G2570 Fragaria x ananassa HOM05D000147 ORTHO05D006488 4.0e-11 70.5 45 75.6
FAN21G2875 Fragaria x ananassa HOM05D000147 ORTHO05D006488 4.0e-11 70.5 45 75.6
FAN25G1494 Fragaria x ananassa HOM05D000147 ORTHO05D006488 4.0e-11 70.5 45 75.6
Peaxi162Scf01211g00129 Petunia axillaris HOM05D000147 ORTHO05D006488 4.0e-11 70.5 46 76.1
RcHm_v2.0_Chr5g0014221 Rosa chinensis HOM05D000147 ORTHO05D006488 4.0e-11 70.5 45 75.6
THA.LOC104814301 Tarenaya hassleriana HOM05D000147 ORTHO05D006488 5.2e-11 70.1 45 77.8
ATR0730G154 Amborella trichopoda HOM05D000147 ORTHO05D006488 6.8e-11 69.7 45 77.8
Potri.011G085200 Populus trichocarpa HOM05D000147 ORTHO05D006488 6.8e-11 69.7 45 77.8
HPP92_023215 Vanilla planifolia HOM05D000147 ORTHO05D006488 6.8e-11 69.7 45 75.6
MELO3C007131.2 Cucumis melo HOM05D000147 ORTHO05D006488 8.8e-11 69.3 45 71.1
SalBow7G2195 Salvia bowleyana HOM05D000147 ORTHO05D006488 8.8e-11 69.3 46 73.9
Sed0007783 Sechium edule HOM05D000147 ORTHO05D006488 8.8e-11 69.3 45 73.3
Migut.H01361 Erythranthe guttata HOM05D000147 ORTHO05D006488 1.2e-10 68.9 46 73.9
Ah.14g086420 Amaranthus hybridus HOM05D000147 ORTHO05D006488 1.5e-10 68.6 45 75.6
CANSAT35G0218 Cannabis sativa HOM05D000147 ORTHO05D006488 1.5e-10 68.6 45 73.3
A05p11110 Brassica napus HOM05D000147 ORTHO05D006488 9.8e-10 65.9 48 75.0
C04p14470 Brassica napus HOM05D000147 ORTHO05D006488 9.8e-10 65.9 48 75.0
BolC4t23030H Brassica oleracea HOM05D000147 ORTHO05D006488 9.8e-10 65.9 48 75.0
BraA05t20058Z Brassica rapa HOM05D000147 ORTHO05D006488 9.8e-10 65.9 48 75.0
AUR62030186 Chenopodium quinoa HOM05D000147 ORTHO05D006488 9.8e-10 65.9 44 75.0
MBI06_g01164_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D023760 9.8e-10 65.9 38 86.8
Hund21545 Selenicereus undatus HOM05D000147 ORTHO05D006488 9.8e-10 65.9 45 73.3
AagrBONN_evm.TU.Sc2ySwM_362.371 Anthoceros agrestis HOM05D000147 ORTHO05D006488 2.2e-09 64.7 46 60.9
Mapoly0006s0087 Marchantia polymorpha HOM05D000147 ORTHO05D006488 3.7e-09 63.9 46 63.0
Pp3c10_3590 Physcomitrium patens HOM05D000147 ORTHO05D006488 5.4e-08 60.1 43 62.8
SMO356G0728 Selaginella moellendorffii HOM05D000147 ORTHO05D006488 1.2e-07 58.9 37 73.0
CsaV3_6G051750 Cucumis sativus L. HOM05D000147 ORTHO05D006488 4.5e-07 57.0 38 71.1
MCO07G035 Micromonas commoda HOM05D000147 ORTHO05D006488 5.9e-07 56.6 46 58.7
AUR62002740 Chenopodium quinoa HOM05D000147 ORTHO05D006488 1.0e-06 55.8 36 75.0
Lj4g0007418 Lotus japonicus HOM05D000147 ORTHO05D006488 1.3e-06 55.5 29 86.2
Cre10.g446400 Chlamydomonas reinhardtii HOM05D000147 ORTHO05D006488 3.8e-06 53.9 46 52.2


User provided reference genes

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