Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 3.1e-66 255.0 129 100.0
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 6.9e-58 227.3 129 83.7
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 4.5e-57 224.6 129 86.0
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 3.8e-56 221.5 129 84.5
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.4e-55 219.5 131 83.2
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 2.5e-55 218.8 129 81.4
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 7.2e-55 217.2 131 83.2
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 9.4e-55 216.9 131 82.4
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 9.4e-55 216.9 131 82.4
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 9.4e-55 216.9 131 82.4
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.2e-54 216.5 129 82.9
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 1.6e-54 216.1 131 81.7
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 1.4e-53 213.0 129 78.3
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.3e-53 212.2 130 80.8
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 3.0e-53 211.8 130 81.5
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 3.9e-53 211.5 130 81.5
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.2e-53 211.1 130 80.8
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 6.7e-53 210.7 130 80.8
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 6.7e-53 210.7 130 80.8
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 8.8e-53 210.3 129 79.8
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.1e-52 209.9 133 79.7
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 1.1e-52 209.9 132 78.8
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 1.1e-52 209.9 128 78.1
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 1.5e-52 209.5 130 80.8
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 2.0e-52 209.1 131 78.6
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 2.0e-52 209.1 130 77.7
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 2.0e-52 209.1 133 77.4
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 2.0e-52 209.1 134 76.1
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.6e-52 208.8 129 79.1
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 2.6e-52 208.8 129 77.5
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 3.3e-52 208.4 129 76.7
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 5.7e-52 207.6 129 79.1
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 7.4e-52 207.2 130 78.5
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 7.4e-52 207.2 130 78.5
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 9.7e-52 206.8 132 76.5
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 1.3e-51 206.5 129 81.4
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 1.3e-51 206.5 129 77.5
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 1.3e-51 206.5 132 77.3
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.3e-51 206.5 130 80.0
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 1.7e-51 206.1 130 80.0
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 2.2e-51 205.7 130 77.7
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 2.8e-51 205.3 132 76.5
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 2.8e-51 205.3 129 79.1
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 2.8e-51 205.3 131 77.9
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 3.7e-51 204.9 129 77.5
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 3.7e-51 204.9 129 79.1
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 4.8e-51 204.5 134 76.9
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 4.8e-51 204.5 131 76.3
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 6.3e-51 204.1 132 75.8
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 6.3e-51 204.1 130 77.7
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 6.3e-51 204.1 130 77.7
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 8.2e-51 203.8 134 76.1
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 8.2e-51 203.8 133 75.9
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 8.2e-51 203.8 130 76.2
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 1.1e-50 203.4 130 76.2
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.1e-50 203.4 130 76.2
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.1e-50 203.4 131 77.9
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 2.4e-50 202.2 125 79.2
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 3.1e-50 201.8 129 76.7
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.1e-50 201.8 129 78.3
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 4.1e-50 201.4 129 72.9
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 5.3e-50 201.1 133 73.7
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 5.3e-50 201.1 129 76.0
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 7.0e-50 200.7 131 75.6
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 7.0e-50 200.7 128 77.3
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 9.1e-50 200.3 133 74.4
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 9.1e-50 200.3 129 75.2
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.2e-49 199.9 130 73.1
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 1.2e-49 199.9 129 75.2
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 1.2e-49 199.9 129 76.0
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 1.6e-49 199.5 133 72.9
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.6e-49 199.5 130 74.6
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 1.6e-49 199.5 130 72.3
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 1.6e-49 199.5 129 77.5
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.0e-49 199.1 129 72.1
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 2.0e-49 199.1 129 75.2
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 2.0e-49 199.1 127 76.4
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 2.0e-49 199.1 129 75.2
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 2.6e-49 198.7 132 74.2
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 3.5e-49 198.4 133 72.9
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 3.5e-49 198.4 129 73.6
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 4.5e-49 198.0 134 72.4
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 4.5e-49 198.0 134 72.4
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 4.5e-49 198.0 134 72.4
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 4.5e-49 198.0 133 71.4
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 4.5e-49 198.0 133 72.2
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 7.7e-49 197.2 133 71.4
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 7.7e-49 197.2 133 71.4
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 7.7e-49 197.2 133 72.9
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 7.7e-49 197.2 129 75.2
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 7.7e-49 197.2 129 72.9
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 7.7e-49 197.2 134 73.1
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 1.0e-48 196.8 129 72.1
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.3e-48 196.4 133 72.9
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 1.3e-48 196.4 134 73.9
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 1.3e-48 196.4 133 70.7
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 1.3e-48 196.4 125 74.4
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.3e-48 196.4 129 72.9
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 1.7e-48 196.1 117 79.5
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 2.2e-48 195.7 130 73.8
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.2e-48 195.7 133 75.9
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 2.9e-48 195.3 129 73.6
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.9e-48 195.3 129 73.6
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 3.8e-48 194.9 134 70.9
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 3.8e-48 194.9 134 70.9
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.8e-48 194.9 132 72.7
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 3.8e-48 194.9 118 82.2
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 5.0e-48 194.5 126 72.2
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 8.5e-48 193.7 130 70.0
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 8.5e-48 193.7 129 73.6
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 1.1e-47 193.4 129 73.6
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 1.1e-47 193.4 134 70.9
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 1.1e-47 193.4 128 74.2
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 1.9e-47 192.6 129 72.9
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.5e-47 192.2 129 69.8
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 2.5e-47 192.2 133 71.4
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 4.2e-47 191.4 133 72.2
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 7.2e-47 190.7 129 69.0
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 7.2e-47 190.7 131 76.3
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 9.4e-47 190.3 129 71.3
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 9.4e-47 190.3 121 76.9
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 2.1e-46 189.1 116 77.6
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 2.1e-46 189.1 129 70.5
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 2.7e-46 188.7 129 70.5
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 3.6e-46 188.3 129 69.8
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 4.7e-46 188.0 129 67.4
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 1.4e-45 186.4 129 69.0
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 1.4e-45 186.4 129 69.8
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 1.8e-45 186.0 145 68.3
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 5.2e-45 184.5 129 70.5
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 6.7e-45 184.1 125 73.6
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 2.0e-44 182.6 130 70.0
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 2.6e-44 182.2 130 70.0
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 4.4e-44 181.4 126 72.2
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 5.7e-44 181.0 117 70.1
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 9.7e-44 180.3 137 68.6
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 1.7e-43 179.5 130 68.5
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 4.8e-43 177.9 127 70.1
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 4.8e-43 177.9 131 67.2
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 8.2e-43 177.2 121 70.2
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 1.1e-42 176.8 130 66.2
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 3.1e-42 175.3 138 65.2
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 7.0e-42 174.1 131 64.1
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 2.9e-40 168.7 129 64.3
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 3.8e-40 168.3 123 68.3
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 3.6e-38 161.8 130 57.7
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 4.7e-38 161.4 91 83.5
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 1.5e-36 156.4 115 64.3
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 8.3e-35 150.6 128 60.2
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 1.7e-32 142.9 115 58.3
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 8.3e-27 124.0 75 78.7
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.4e-26 123.2 85 75.3
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 3.5e-25 118.6 78 69.2
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.3e-24 116.7 74 77.0
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 6.6e-24 114.4 73 75.3
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.5e-23 113.2 74 71.6
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.6e-22 109.8 77 67.5
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 2.1e-22 109.4 77 67.5
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 4.6e-17 91.7 60 78.3
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 1.0e-16 90.5 56 78.6
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 6.8e-13 77.8 52 67.3
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 4.4e-12 75.1 50 70.0
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 1.6e-09 66.6 95 34.7
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 3.3e-07 58.9 62 51.6


User provided reference genes

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