Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g27809_MAGBIO Magnolia biondii HOM05D003234 ORTHO05D003635 3.2e-45 184.9 104 100.0
PGR031G2527 Punica granatum HOM05D003234 ORTHO05D003635 2.5e-34 148.7 107 81.3
VMungo1309G2978 Vigna mungo HOM05D003234 ORTHO05D003635 2.5e-34 148.7 107 80.4
Phvul.009G021200 Phaseolus vulgaris HOM05D003234 ORTHO05D003635 3.3e-34 148.3 107 81.3
arahy.Tifrunner.gnm1.ann1.G2HAI2 Arachis hypogaea HOM05D003234 ORTHO05D003635 5.6e-34 147.5 107 79.4
THA.LOC104813762 Tarenaya hassleriana HOM05D003234 ORTHO05D003635 5.6e-34 147.5 107 82.2
TPR.G38123 Trifolium pratense HOM05D003234 ORTHO05D003635 5.6e-34 147.5 107 78.5
MD08G1004300 Malus domestica HOM05D003234 ORTHO05D003635 9.6e-34 146.7 107 79.4
Dinv31919 Davidia involucrata HOM05D003234 ORTHO05D003635 1.3e-33 146.4 107 82.2
arahy.Tifrunner.gnm1.ann1.VFC9DI Arachis hypogaea HOM05D003234 ORTHO05D003635 1.6e-33 146.0 106 78.3
CiPaw.08G071600 Carya illinoinensis HOM05D003234 ORTHO05D003635 1.6e-33 146.0 107 80.4
Duzib093G1967 Durio zibethinus HOM05D003234 ORTHO05D003635 1.6e-33 146.0 107 82.2
Glyma.06G019600 Glycine max HOM05D003234 ORTHO05D003635 1.6e-33 146.0 107 78.5
Thhalv10019348m.g Eutrema salsugineum HOM05D003234 ORTHO05D003635 2.1e-33 145.6 107 80.4
Glyma.04G019300 Glycine max HOM05D003234 ORTHO05D003635 2.1e-33 145.6 107 78.5
Gohir.A05G180900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.1e-33 145.6 107 81.3
Gohir.D05G183900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.1e-33 145.6 107 81.3
Gorai.009G189400 Gossypium raimondii HOM05D003234 ORTHO05D003635 2.1e-33 145.6 107 81.3
Manes.05G140300 Manihot esculenta HOM05D003234 ORTHO05D003635 2.1e-33 145.6 107 81.3
Cpa.g.sc26.223 Carica papaya HOM05D003234 ORTHO05D003635 2.8e-33 145.2 107 80.4
MD15G1003700 Malus domestica HOM05D003234 ORTHO05D003635 2.8e-33 145.2 107 78.5
Duzib116G0672 Durio zibethinus HOM05D003234 ORTHO05D003635 3.7e-33 144.8 107 80.4
TWI12G0861 Tripterygium wilfordii HOM05D003234 ORTHO05D003635 3.7e-33 144.8 107 81.3
Aa31LG7G4760 Aethionema arabicum HOM05D003234 ORTHO05D003635 4.8e-33 144.4 107 79.4
CANSAT25G0014 Cannabis sativa HOM05D003234 ORTHO05D003635 4.8e-33 144.4 107 80.4
Lj1g0024220 Lotus japonicus HOM05D003234 ORTHO05D003635 4.8e-33 144.4 107 77.6
Nn6g31830 Nelumbo nucifera HOM05D003234 ORTHO05D003635 4.8e-33 144.4 107 78.5
Prupe.1G356200 Prunus persica HOM05D003234 ORTHO05D003635 4.8e-33 144.4 107 80.4
Thecc.08G055600 Theobroma cacao HOM05D003234 ORTHO05D003635 4.8e-33 144.4 107 81.3
AT1G20460 Arabidopsis thaliana HOM05D003234 ORTHO05D003635 6.2e-33 144.1 107 77.6
CARHR020910 Cardamine hirsuta HOM05D003234 ORTHO05D003635 6.2e-33 144.1 108 76.9
Thhalv10009165m.g Eutrema salsugineum HOM05D003234 ORTHO05D003635 6.2e-33 144.1 107 78.5
FAN27G0038 Fragaria x ananassa HOM05D003234 ORTHO05D003635 6.2e-33 144.1 107 79.4
Sp1g18170 Schrenkiella parvula HOM05D003234 ORTHO05D003635 6.2e-33 144.1 107 78.5
BcaC08g47113 Brassica carinata HOM05D003234 ORTHO05D003635 8.1e-33 143.7 107 78.5
Carub.0001s1993 Capsella rubella HOM05D003234 ORTHO05D003635 8.1e-33 143.7 107 77.6
Manes.18G007200 Manihot esculenta HOM05D003234 ORTHO05D003635 8.1e-33 143.7 107 79.4
Sp5g31330 Schrenkiella parvula HOM05D003234 ORTHO05D003635 8.1e-33 143.7 107 78.5
Sed0016414 Sechium edule HOM05D003234 ORTHO05D003635 8.1e-33 143.7 107 79.4
CiPaw.07G140700 Carya illinoinensis HOM05D003234 ORTHO05D003635 1.1e-32 143.3 107 80.4
Potri.002G013000 Populus trichocarpa HOM05D003234 ORTHO05D003635 1.1e-32 143.3 107 77.6
Potri.005G248300 Populus trichocarpa HOM05D003234 ORTHO05D003635 1.1e-32 143.3 107 78.5
ClCG08G009600 Citrullus lanatus HOM05D003234 ORTHO05D003635 1.8e-32 142.5 107 79.4
Cc10_g00860 Coffea canephora HOM05D003234 ORTHO05D003635 1.8e-32 142.5 107 78.5
FAN15G0717 Fragaria x ananassa HOM05D003234 ORTHO05D003635 1.8e-32 142.5 107 77.6
FAN20G3055 Fragaria x ananassa HOM05D003234 ORTHO05D003635 1.8e-32 142.5 107 77.6
Nitab4.5_0002710g0120 Nicotiana tabacum HOM05D003234 ORTHO05D003635 1.8e-32 142.5 108 79.6
RcHm_v2.0_Chr6g0304061 Rosa chinensis HOM05D003234 ORTHO05D003635 1.8e-32 142.5 107 77.6
Hma1.2p1_1260F.1_g271060 Hydrangea macrophylla HOM05D003234 ORTHO05D003635 2.4e-32 142.1 106 79.2
Psat0s3811g0040 Pisum sativum HOM05D003234 ORTHO05D003635 2.4e-32 142.1 107 77.6
BcaB07g32048 Brassica carinata HOM05D003234 ORTHO05D003635 3.1e-32 141.7 107 77.6
BcaC05g25956 Brassica carinata HOM05D003234 ORTHO05D003635 3.1e-32 141.7 107 77.6
A06p16500 Brassica napus HOM05D003234 ORTHO05D003635 3.1e-32 141.7 107 77.6
C05p19050 Brassica napus HOM05D003234 ORTHO05D003635 3.1e-32 141.7 107 77.6
BraA06t24756Z Brassica rapa HOM05D003234 ORTHO05D003635 3.1e-32 141.7 107 77.6
MELO3C026549.2 Cucumis melo HOM05D003234 ORTHO05D003635 3.1e-32 141.7 107 79.4
CsaV3_6G031700 Cucumis sativus L. HOM05D003234 ORTHO05D003635 3.1e-32 141.7 107 79.4
PGSC0003DMG400029411 Solanum tuberosum HOM05D003234 ORTHO05D003635 3.1e-32 141.7 107 80.4
Duzib041G0372 Durio zibethinus HOM05D003234 ORTHO05D003635 4.0e-32 141.4 107 81.3
Medtr3g115080 Medicago truncatula HOM05D003234 ORTHO05D003635 4.0e-32 141.4 108 77.8
Actinidia15481 Actinidia chinensis HOM05D003234 ORTHO05D003635 5.3e-32 141.0 107 81.3
FvH4_2g37670 Fragaria vesca HOM05D003234 ORTHO05D003635 5.3e-32 141.0 107 77.6
Actinidia37965 Actinidia chinensis HOM05D003234 ORTHO05D003635 6.9e-32 140.6 107 79.4
ClCG00G002880 Citrullus lanatus HOM05D003234 ORTHO05D003635 6.9e-32 140.6 106 78.3
Nitab4.5_0000337g0170 Nicotiana tabacum HOM05D003234 ORTHO05D003635 6.9e-32 140.6 108 78.7
Solyc12g094510.2 Solanum lycopersicum HOM05D003234 ORTHO05D003635 6.9e-32 140.6 107 79.4
Sopen12g031400 Solanum pennellii HOM05D003234 ORTHO05D003635 6.9e-32 140.6 107 79.4
Carub.0002s2308 Capsella rubella HOM05D003234 ORTHO05D003635 9.0e-32 140.2 107 78.5
Gohir.A02G083600 Gossypium hirsutum HOM05D003234 ORTHO05D003635 1.5e-31 139.4 107 76.6
Nitab4.5_0007869g0020 Nicotiana tabacum HOM05D003234 ORTHO05D003635 1.5e-31 139.4 107 78.5
BNapus_Darmor_BZH_scaffold_170p00030 Brassica napus HOM05D003234 ORTHO05D003635 2.0e-31 139.0 107 76.6
Nitab4.5_0000699g0170 Nicotiana tabacum HOM05D003234 ORTHO05D003635 2.0e-31 139.0 107 77.6
GSVIVG01008697001 Vitis vinifera HOM05D003234 ORTHO05D003635 2.0e-31 139.0 107 78.5
AT1G76185 Arabidopsis thaliana HOM05D003234 ORTHO05D003635 3.4e-31 138.3 107 76.6
Gorai.005G112900 Gossypium raimondii HOM05D003234 ORTHO05D003635 3.4e-31 138.3 107 76.6
Sed0012631 Sechium edule HOM05D003234 ORTHO05D003635 3.4e-31 138.3 107 77.6
A02p20490 Brassica napus HOM05D003234 ORTHO05D003635 4.5e-31 137.9 107 73.8
Gohir.D02G099100 Gossypium hirsutum HOM05D003234 ORTHO05D003635 4.5e-31 137.9 107 76.6
CAN.G208.7 Capsicum annuum HOM05D003234 ORTHO05D003635 5.8e-31 137.5 107 77.6
Ciclev10002915m.g Citrus clementina HOM05D003234 ORTHO05D003635 5.8e-31 137.5 107 78.5
Peaxi162Scf00400g00314 Petunia axillaris HOM05D003234 ORTHO05D003635 5.8e-31 137.5 108 75.9
Rhsim06G0008900 Rhododendron simsii HOM05D003234 ORTHO05D003635 5.8e-31 137.5 107 77.6
THA.LOC104809745 Tarenaya hassleriana HOM05D003234 ORTHO05D003635 1.0e-30 136.7 107 77.6
Gohir.A05G254800 Gossypium hirsutum HOM05D003234 ORTHO05D003635 1.3e-30 136.3 107 76.6
Gorai.009G267900 Gossypium raimondii HOM05D003234 ORTHO05D003635 1.7e-30 136.0 107 76.6
MSTRG.22360 Avicennia marina HOM05D003234 ORTHO05D003635 2.2e-30 135.6 107 78.5
Gohir.D05G256400 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.2e-30 135.6 107 76.6
C02p33350 Brassica napus HOM05D003234 ORTHO05D003635 3.8e-30 134.8 108 73.1
BcaB02g07054 Brassica carinata HOM05D003234 ORTHO05D003635 6.5e-30 134.0 107 73.8
Oeu011320.1 Olea europaea HOM05D003234 ORTHO05D003635 6.5e-30 134.0 107 79.4
EL10Ac1g02011 Beta vulgaris HOM05D003234 ORTHO05D003635 8.4e-30 133.7 107 72.0
SGA_v2.0_scaffold19G08601 Striga asiatica HOM05D003234 ORTHO05D003635 8.4e-30 133.7 107 76.6
QL02p013773 Quercus lobata HOM05D003234 ORTHO05D003635 1.1e-29 133.3 129 65.9
unitig_21.g20148 Utricularia gibba HOM05D003234 ORTHO05D003635 1.4e-29 132.9 107 73.8
BcaC03g15650 Brassica carinata HOM05D003234 ORTHO05D003635 1.9e-29 132.5 110 71.8
Migut.N03196 Erythranthe guttata HOM05D003234 ORTHO05D003635 1.9e-29 132.5 107 74.8
Sc02g0009000 Simmondsia chinensis HOM05D003234 ORTHO05D003635 3.2e-29 131.7 107 72.0
Eucgr.F03542 Eucalyptus grandis HOM05D003234 ORTHO05D003635 4.2e-29 131.3 107 73.8
Lalb_Chr19g0131711 Lupinus albus HOM05D003234 ORTHO05D003635 4.2e-29 131.3 109 73.4
Hund05127 Selenicereus undatus HOM05D003234 ORTHO05D003635 4.2e-29 131.3 107 73.8
CDE02G2075 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 5.5e-29 131.0 107 74.8
BraA02t07080Z Brassica rapa HOM05D003234 ORTHO05D003635 7.1e-29 130.6 108 71.3
unitig_744.g24608 Utricularia gibba HOM05D003234 ORTHO05D003635 9.3e-29 130.2 108 72.2
C06p32180 Brassica napus HOM05D003234 ORTHO05D003635 1.6e-28 129.4 107 72.9
vmacro04393 Vaccinium macrocarpon HOM05D003234 ORTHO05D003635 3.5e-28 128.3 107 73.8
Aqoxy5G01058 Aquilegia oxysepala HOM05D003234 ORTHO05D003635 4.6e-28 127.9 109 75.2
HanXRQChr12g0366591 Helianthus annuus HOM05D003234 ORTHO05D003635 6.0e-28 127.5 107 68.2
Nitab4.5_0000588g0270 Nicotiana tabacum HOM05D003234 ORTHO05D003635 6.0e-28 127.5 108 75.0
SHI08007 Sapria himalayana HOM05D003234 ORTHO05D003635 6.0e-28 127.5 113 71.7
A07p28600 Brassica napus HOM05D003234 ORTHO05D003635 1.0e-27 126.7 107 71.0
Lsat_1_v5_gn_8_27741 Lactuca sativa HOM05D003234 ORTHO05D003635 1.8e-27 125.9 106 70.8
MSTRG.1123 Avicennia marina HOM05D003234 ORTHO05D003635 3.0e-27 125.2 107 69.2
SalBow6G3231 Salvia bowleyana HOM05D003234 ORTHO05D003635 3.9e-27 124.8 107 75.7
BraA07t30501Z Brassica rapa HOM05D003234 ORTHO05D003635 5.1e-27 124.4 107 72.9
Lalb_Chr01g0008381 Lupinus albus HOM05D003234 ORTHO05D003635 1.1e-26 123.2 107 72.0
Migut.C00924 Erythranthe guttata HOM05D003234 ORTHO05D003635 3.3e-26 121.7 107 69.2
MSTRG.25294 Avicennia marina HOM05D003234 ORTHO05D003635 5.7e-26 120.9 107 70.1
Lalb_Chr11g0061721 Lupinus albus HOM05D003234 ORTHO05D003635 5.7e-26 120.9 113 64.6
Solyc04g082210.3 Solanum lycopersicum HOM05D003234 ORTHO05D003635 5.7e-26 120.9 108 72.2
PGSC0003DMG401009896 Solanum tuberosum HOM05D003234 ORTHO05D003635 7.4e-26 120.6 108 72.2
Lalb_Chr08g0246351 Lupinus albus HOM05D003234 ORTHO05D003635 9.6e-26 120.2 125 62.4
Lsat_1_v5_gn_5_39760 Lactuca sativa HOM05D003234 ORTHO05D003635 1.6e-25 119.4 107 68.2
Sopen04g035840 Solanum pennellii HOM05D003234 ORTHO05D003635 1.6e-25 119.4 108 71.3
vmacro21831 Vaccinium macrocarpon HOM05D003234 ORTHO05D003635 1.6e-25 119.4 146 56.8
SGA_v2.0_scaffold275G46578 Striga asiatica HOM05D003234 ORTHO05D003635 2.1e-25 119.0 107 71.0
Peaxi162Scf01481g00038 Petunia axillaris HOM05D003234 ORTHO05D003635 1.8e-24 115.9 107 69.2
CSS0034652 Camellia sinensis var. sinensis HOM05D003234 ORTHO05D003635 3.1e-24 115.2 107 69.2
CAN.G311.99 Capsicum annuum HOM05D003234 ORTHO05D003635 1.2e-23 113.2 108 69.4
CDE09G0257 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 1.9e-21 105.9 107 66.4
ECA233G0660 Erigeron canadensis HOM05D003234 ORTHO05D003635 7.2e-21 104.0 88 67.0
Sabra05G0191800 Salix brachista HOM05D003234 ORTHO05D003635 7.2e-21 104.0 199 42.2
PSO170G0681 Papaver somniferum HOM05D003234 ORTHO05D003635 1.2e-20 103.2 65 86.2
TAR628G0584 Trochodendron aralioides HOM05D003234 ORTHO05D003635 2.1e-20 102.4 90 74.4
SEGI_11040 Sequoiadendron giganteum HOM05D003234 ORTHO05D003635 7.9e-20 100.5 107 55.1
HanXRQChr14g0428701 Helianthus annuus HOM05D003234 ORTHO05D003635 2.3e-19 99.0 109 55.0
PSO210G7820 Papaver somniferum HOM05D003234 ORTHO05D003635 3.0e-19 98.6 76 76.3
BolC5t30606H Brassica oleracea HOM05D003234 ORTHO05D003635 8.7e-19 97.1 73 78.1
Peaxi162Scf00064g01012 Petunia axillaris HOM05D003234 ORTHO05D003635 3.7e-17 91.7 86 66.3
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 3.1e-16 88.6 87 60.9
ATR0733G120 Amborella trichopoda HOM05D003234 ORTHO05D003635 1.5e-15 86.3 107 50.5
Sabra02G0010200 Salix brachista HOM05D003234 ORTHO05D003635 4.5e-15 84.7 70 72.9
BraA07t31705Z Brassica rapa HOM05D003234 ORTHO05D003635 5.0e-14 81.3 67 73.1
MSTRG.23532 Avicennia marina HOM05D003234 ORTHO05D003635 1.8e-11 72.8 107 45.8
TAR376G0434 Trochodendron aralioides HOM05D003234 ORTHO05D003635 3.0e-11 72.0 55 80.0
Aqoxy5G01648 Aquilegia oxysepala HOM05D003234 ORTHO05D003635 5.1e-11 71.2 106 46.2
Aqoxy6G01093 Aquilegia oxysepala HOM05D003234 ORTHO05D003635 5.1e-11 71.2 108 45.4
GSVIVG01018978001 Vitis vinifera HOM05D003234 ORTHO05D003635 1.1e-10 70.1 107 44.9
Manes.01G134700 Manihot esculenta HOM05D003234 ORTHO05D003635 1.5e-10 69.7 107 46.7
CANSAT01G1184 Cannabis sativa HOM05D003234 ORTHO05D003635 2.0e-10 69.3 107 44.9
CSS0031108 Camellia sinensis var. sinensis HOM05D003234 ORTHO05D003635 9.7e-10 67.0 107 46.7
TAR625G0832 Trochodendron aralioides HOM05D003234 ORTHO05D003635 9.7e-10 67.0 73 65.8
SEGI_02230 Sequoiadendron giganteum HOM05D003234 ORTHO05D003635 1.7e-09 66.2 65 53.8
Actinidia36555 Actinidia chinensis HOM05D003234 ORTHO05D003635 2.2e-09 65.9 107 47.7
HanXRQChr15g0482261 Helianthus annuus HOM05D003234 ORTHO05D003635 2.8e-09 65.5 107 41.1
Lsat_1_v5_gn_3_77600 Lactuca sativa HOM05D003234 ORTHO05D003635 2.8e-09 65.5 106 39.6
COL.COLO4_21608 Corchorus olitorius HOM05D003234 ORTHO05D003635 4.8e-09 64.7 32 96.9
ECA246G3301 Erigeron canadensis HOM05D003234 ORTHO05D003635 8.2e-09 63.9 107 42.1
BcaC08g45540 Brassica carinata HOM05D003234 ORTHO05D003635 1.1e-08 63.5 32 93.8
BolC6t38341H Brassica oleracea HOM05D003234 ORTHO05D003635 1.1e-08 63.5 32 93.8
Hma1.2p1_0717F.1_g208130 Hydrangea macrophylla HOM05D003234 ORTHO05D003635 1.1e-08 63.5 106 41.5
Migut.H00998 Erythranthe guttata HOM05D003234 ORTHO05D003635 1.4e-08 63.2 107 41.1
Actinidia12120 Actinidia chinensis HOM05D003234 ORTHO05D003635 1.8e-08 62.8 107 45.8
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 1.8e-08 62.8 106 40.6
Thecc.01G037000 Theobroma cacao HOM05D003234 ORTHO05D003635 4.1e-08 61.6 107 45.8
CiPaw.02G016600 Carya illinoinensis HOM05D003234 ORTHO05D003635 5.3e-08 61.2 107 45.8
CDE04G0975 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 5.3e-08 61.2 71 46.5
Rhsim07G0254000 Rhododendron simsii HOM05D003234 ORTHO05D003635 6.9e-08 60.8 30 96.7
Ah.00g000460 Amaranthus hybridus HOM05D003234 ORTHO05D003635 2.0e-07 59.3 49 69.4
Lalb_Chr09g0322471 Lupinus albus HOM05D003234 ORTHO05D003635 2.0e-07 59.3 107 42.1
Ciclev10026821m.g Citrus clementina HOM05D003234 ORTHO05D003635 2.6e-07 58.9 107 41.1
Zm00001eb009770 Zea mays HOM05D003234 ORTHO05D003635 4.5e-07 58.2 108 44.4
Gohir.D10G092900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 7.7e-07 57.4 107 41.1
CAN.G358.101 Capsicum annuum HOM05D003234 ORTHO05D003635 1.0e-06 57.0 107 40.2
arahy.Tifrunner.gnm1.ann1.F5AS58 Arachis hypogaea HOM05D003234 ORTHO05D003635 1.3e-06 56.6 107 44.9
arahy.Tifrunner.gnm1.ann1.WI3JHU Arachis hypogaea HOM05D003234 ORTHO05D003635 1.3e-06 56.6 107 44.9
Dinv39975 Davidia involucrata HOM05D003234 ORTHO05D003635 1.3e-06 56.6 106 41.5
Gorai.011G102100 Gossypium raimondii HOM05D003234 ORTHO05D003635 1.3e-06 56.6 107 41.1
Mapoly0075s0049 Marchantia polymorpha HOM05D003234 ORTHO05D003635 1.3e-06 56.6 102 42.2
Psat4g092120 Pisum sativum HOM05D003234 ORTHO05D003635 1.3e-06 56.6 107 41.1
CDE02G3043 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 2.9e-06 55.5 50 54.0
Cc07_g09430 Coffea canephora HOM05D003234 ORTHO05D003635 3.8e-06 55.1 107 42.1
BolC2t09366H Brassica oleracea HOM05D003234 ORTHO05D003635 8.5e-06 53.9 31 80.6
TPR.G34985 Trifolium pratense HOM05D003234 ORTHO05D003635 8.5e-06 53.9 107 40.2


User provided reference genes

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