Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g26896_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 3.5e-97 358.2 173 100.0
MBI05_g26897_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 3.7e-22 109.0 67 76.1
MBI05_g25817_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 7.0e-21 104.8 67 74.6
MBI05_g46239_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 5.5e-18 95.1 99 53.5
TAR628G0207 Trochodendron aralioides HOM05D003311 ORTHO05D003707 1.4e-16 90.5 93 49.5
MBI09_g00986_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 3.4e-15 85.9 87 51.7
TAR376G0773 Trochodendron aralioides HOM05D003311 ORTHO05D003707 2.2e-14 83.2 69 56.5
Nn5g29097 Nelumbo nucifera HOM05D003311 ORTHO05D003707 8.3e-14 81.3 93 46.2
Nn1g05901 Nelumbo nucifera HOM05D003311 ORTHO05D003707 2.4e-13 79.7 71 56.3
GSVIVG01024081001 Vitis vinifera HOM05D003311 ORTHO05D003707 1.2e-12 77.4 98 45.9
ATR0810G037 Amborella trichopoda HOM05D003311 ORTHO05D003707 2.0e-12 76.6 64 54.7
CiPaw.06G125100 Carya illinoinensis HOM05D003311 ORTHO05D003707 7.7e-12 74.7 92 44.6
CiPaw.05G077500 Carya illinoinensis HOM05D003311 ORTHO05D003707 1.3e-11 73.9 67 53.7
Actinidia20487 Actinidia chinensis HOM05D000144 ORTHO05D003707 1.7e-11 73.6 107 43.0
Aqoxy5G01798 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 1.7e-11 73.6 66 56.1
Sabra09G0099300 Salix brachista HOM05D003311 ORTHO05D003707 1.7e-11 73.6 89 46.1
Potri.004G168600 Populus trichocarpa HOM05D003311 ORTHO05D003707 1.9e-10 70.1 92 44.6
Actinidia00597 Actinidia chinensis HOM05D003311 ORTHO05D003707 3.2e-10 69.3 84 41.7
CARHR111970 Cardamine hirsuta HOM05D003311 ORTHO05D003707 3.2e-10 69.3 119 37.0
Sabra04G0113000 Salix brachista HOM05D003311 ORTHO05D003707 4.2e-10 68.9 92 43.5
Dinv04967 Davidia involucrata HOM05D003311 ORTHO05D003707 5.5e-10 68.6 66 54.5
Potri.009G129900 Populus trichocarpa HOM05D003311 ORTHO05D003707 5.5e-10 68.6 105 40.0
Carub.0004s0016 Capsella rubella HOM05D003311 ORTHO05D003707 9.4e-10 67.8 94 38.3
Lalb_Chr03g0024711 Lupinus albus HOM05D003311 ORTHO05D003707 9.4e-10 67.8 61 54.1
Oeu010053.1 Olea europaea HOM05D003311 ORTHO05D003707 9.4e-10 67.8 67 49.3
ClCG00G004470 Citrullus lanatus HOM05D003311 ORTHO05D003707 2.1e-09 66.6 95 38.9
ClCG02G011360 Citrullus lanatus HOM05D003311 ORTHO05D003707 2.1e-09 66.6 95 38.9
ClCG02G011540 Citrullus lanatus HOM05D003311 ORTHO05D003707 2.1e-09 66.6 95 38.9
Sp4g00290 Schrenkiella parvula HOM05D003311 ORTHO05D003707 2.1e-09 66.6 93 40.9
Aqoxy5G01799 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 2.7e-09 66.2 72 45.8
Eucgr.L01869 Eucalyptus grandis HOM05D003311 ORTHO05D003707 2.7e-09 66.2 62 53.2
CDE08G0629 Ceratophyllum demersum HOM05D003311 ORTHO05D003707 3.6e-09 65.9 61 54.1
PGR042G2254 Punica granatum HOM05D003311 ORTHO05D003707 3.6e-09 65.9 71 46.5
Ciclev10029326m.g Citrus clementina HOM05D003311 ORTHO05D003707 6.1e-09 65.1 65 53.8
Oeu008607.1 Olea europaea HOM05D003311 ORTHO05D003707 6.1e-09 65.1 67 49.3
QL11p047628 Quercus lobata HOM05D003311 ORTHO05D003707 6.1e-09 65.1 53 56.6
DCAR_022953 Daucus carota HOM05D003311 ORTHO05D003707 8.0e-09 64.7 61 52.5
Gorai.002G193500 Gossypium raimondii HOM05D003311 ORTHO05D003707 8.0e-09 64.7 61 50.8
Hma1.2p1_4000F.1_g338120 Hydrangea macrophylla HOM05D003311 ORTHO05D003707 8.0e-09 64.7 80 40.0
Cfa005186 Carpinus fangiana HOM05D003311 ORTHO05D003707 1.0e-08 64.3 66 47.0
Gohir.A01G164100 Gossypium hirsutum HOM05D003311 ORTHO05D003707 1.0e-08 64.3 63 49.2
Gohir.D01G156000 Gossypium hirsutum HOM05D003311 ORTHO05D003707 1.0e-08 64.3 61 50.8
Atru.chr5.3230 Acer truncatum HOM05D003311 ORTHO05D003707 1.4e-08 63.9 100 41.0
AT4G38770 Arabidopsis thaliana HOM05D003311 ORTHO05D003707 1.4e-08 63.9 66 42.4
CsaV3_2G015730 Cucumis sativus L. HOM05D003311 ORTHO05D003707 1.8e-08 63.5 103 36.9
Oeu008608.1 Olea europaea HOM05D003311 ORTHO05D003707 1.8e-08 63.5 67 47.8
Rhsim11G0187900 Rhododendron simsii HOM05D003311 ORTHO05D003707 1.8e-08 63.5 59 50.8
Sed0012527 Sechium edule HOM05D003311 ORTHO05D003707 1.8e-08 63.5 148 31.1
TWI79G0740 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 1.8e-08 63.5 72 45.8
MSTRG.5426 Avicennia marina HOM05D003311 ORTHO05D003707 2.3e-08 63.2 67 44.8
TWI75G0647 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 2.3e-08 63.2 126 34.9
MELO3C020785.2 Cucumis melo HOM05D003311 ORTHO05D003707 3.0e-08 62.8 103 36.9
Lalb_Chr01g0001331 Lupinus albus HOM05D003311 ORTHO05D003707 3.0e-08 62.8 61 47.5
AL7G10640 Arabidopsis lyrata HOM05D003311 ORTHO05D003707 4.0e-08 62.4 66 40.9
Ciclev10028101m.g Citrus clementina HOM05D003311 ORTHO05D003707 5.2e-08 62.0 48 58.3
CARHR294460 Cardamine hirsuta HOM05D003311 ORTHO05D003707 8.8e-08 61.2 66 40.9
Aa31LG6G16430 Aethionema arabicum HOM05D003311 ORTHO05D003707 1.2e-07 60.8 66 39.4
Duzib248G1175 Durio zibethinus HOM05D003311 ORTHO05D003707 1.2e-07 60.8 94 39.4
Thhalv10025123m.g Eutrema salsugineum HOM05D003311 ORTHO05D003707 1.2e-07 60.8 66 39.4
A04p15910 Brassica napus HOM05D003311 ORTHO05D003707 1.5e-07 60.5 67 43.3
Haze_02195 Corylus avellana HOM05D003311 ORTHO05D003707 1.5e-07 60.5 48 54.2
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.5e-07 60.5 51 54.9
CSS0033713 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 2.0e-07 60.1 78 46.2
DCAR_003701 Daucus carota HOM05D003311 ORTHO05D003707 2.0e-07 60.1 64 43.8
Medtr4g075333 Medicago truncatula HOM05D003311 ORTHO05D003707 2.0e-07 60.1 66 48.5
Sp7g37040 Schrenkiella parvula HOM05D003311 ORTHO05D003707 2.0e-07 60.1 66 39.4
Carub.0007s0062 Capsella rubella HOM05D003311 ORTHO05D003707 2.6e-07 59.7 66 40.9
Duzib052G0176 Durio zibethinus HOM05D003311 ORTHO05D003707 2.6e-07 59.7 63 47.6
Hund06406 Selenicereus undatus HOM05D003396 ORTHO05D003646 2.6e-07 59.7 63 46.0
THA.LOC104824774 Tarenaya hassleriana HOM05D003311 ORTHO05D003707 2.6e-07 59.7 57 47.4
MSTRG.16857 Avicennia marina HOM05D003311 ORTHO05D003707 3.4e-07 59.3 65 41.5
vmacro02251 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 3.4e-07 59.3 67 47.8
AUR62010091 Chenopodium quinoa HOM05D003311 ORTHO05D003707 4.4e-07 58.9 61 44.3
COL.COLO4_17258 Corchorus olitorius HOM05D003311 ORTHO05D003707 4.4e-07 58.9 89 38.2
Duzib099G0001 Durio zibethinus HOM05D003311 ORTHO05D003707 4.4e-07 58.9 63 46.0
Atru.chr5.3229 Acer truncatum HOM05D003311 ORTHO05D003707 5.7e-07 58.5 67 44.8
CSS0038966 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 5.7e-07 58.5 130 33.8
Manes.11G090200 Manihot esculenta HOM05D003311 ORTHO05D003707 5.7e-07 58.5 74 43.2
CANSAT25G1598 Cannabis sativa HOM05D003311 ORTHO05D003707 7.5e-07 58.2 113 31.0
AL4G10230 Arabidopsis lyrata HOM05D003311 ORTHO05D003707 9.8e-07 57.8 119 33.6
C04p50360 Brassica napus HOM05D003311 ORTHO05D003707 9.8e-07 57.8 59 44.1
BolC4t26634H Brassica oleracea HOM05D003311 ORTHO05D003707 9.8e-07 57.8 59 44.1
Nitab4.5_0000956g0190 Nicotiana tabacum HOM05D003311 ORTHO05D003707 9.8e-07 57.8 68 45.6
Thecc.02G066700 Theobroma cacao HOM05D003311 ORTHO05D003707 9.8e-07 57.8 91 38.5
CsaV3_7G000820 Cucumis sativus L. HOM05D000144 ORTHO05D003707 1.3e-06 57.4 61 47.5
BcaB03g12224 Brassica carinata HOM05D003311 ORTHO05D003707 1.7e-06 57.0 68 39.7
AUR62013087 Chenopodium quinoa HOM05D003311 ORTHO05D003707 2.2e-06 56.6 61 41.0
Ca_19004_v3 Cicer arietinum L. HOM05D003311 ORTHO05D003707 2.2e-06 56.6 66 47.0
Duzib132G0547 Durio zibethinus HOM05D003311 ORTHO05D003707 2.2e-06 56.6 63 46.0
MD10G1118600 Malus domestica HOM05D003311 ORTHO05D003707 2.2e-06 56.6 111 36.0
Prupe.8G160900 Prunus persica HOM05D003311 ORTHO05D003707 2.2e-06 56.6 102 42.2
PGSC0003DMG400004441 Solanum tuberosum HOM05D003311 ORTHO05D003707 2.2e-06 56.6 65 47.7
AT2G21140 Arabidopsis thaliana HOM05D003311 ORTHO05D003707 2.8e-06 56.2 119 32.8
Sopen01g053220 Solanum pennellii HOM05D003311 ORTHO05D003707 2.8e-06 56.2 67 46.3
PGSC0003DMG400001243 Solanum tuberosum HOM05D003311 ORTHO05D003707 2.8e-06 56.2 65 47.7
TPR.G17164 Trifolium pratense HOM05D003311 ORTHO05D003707 2.8e-06 56.2 66 45.5
MELO3C013376.2 Cucumis melo HOM05D003311 ORTHO05D003707 3.7e-06 55.8 61 47.5
Sed0022693 Sechium edule HOM05D003311 ORTHO05D003707 3.7e-06 55.8 67 44.8
Solyc10g054900.2 Solanum lycopersicum HOM05D003311 ORTHO05D003707 3.7e-06 55.8 65 47.7
HanXRQChr10g0289061 Helianthus annuus HOM05D003311 ORTHO05D003707 4.9e-06 55.5 64 42.2
Peaxi162Scf00538g00520 Petunia axillaris HOM05D003311 ORTHO05D003707 4.9e-06 55.5 66 45.5
FvH4_2g01970 Fragaria vesca HOM05D003311 ORTHO05D003707 6.3e-06 55.1 91 37.4
FAN15G0502 Fragaria x ananassa HOM05D003311 ORTHO05D003707 6.3e-06 55.1 91 37.4
FAN20G1603 Fragaria x ananassa HOM05D003311 ORTHO05D003707 6.3e-06 55.1 91 37.4
FAN24G0785 Fragaria x ananassa HOM05D003311 ORTHO05D003707 6.3e-06 55.1 91 37.4
THA.LOC104807787 Tarenaya hassleriana HOM05D003311 ORTHO05D003707 6.3e-06 55.1 83 36.1
GSVIVG01024076001 Vitis vinifera HOM05D003311 ORTHO05D003707 6.3e-06 55.1 66 47.0
A08p24020 Brassica napus HOM05D003311 ORTHO05D003707 8.3e-06 54.7 67 38.8
BraA08t34359Z Brassica rapa HOM05D003311 ORTHO05D003707 8.3e-06 54.7 67 38.8
HanXRQChr10g0294871 Helianthus annuus HOM05D003311 ORTHO05D003707 8.3e-06 54.7 64 43.8
Nitab4.5_0000980g0220 Nicotiana tabacum HOM05D003311 ORTHO05D003707 8.3e-06 54.7 67 41.8
PSO700G0002 Papaver somniferum HOM05D003311 ORTHO05D003707 8.3e-06 54.7 64 43.8
RcHm_v2.0_Chr6g0245161 Rosa chinensis HOM05D003311 ORTHO05D003707 8.3e-06 54.7 70 41.4
Sopen10g024820 Solanum pennellii HOM05D003311 ORTHO05D003707 8.3e-06 54.7 65 46.2


User provided reference genes

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