Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.5e-43 179.1 90 100.0
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 7.6e-11 70.5 70 58.6
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 1.1e-09 66.6 70 57.1
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.4e-09 66.2 60 66.7
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 1.4e-09 66.2 86 51.2
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 1.9e-09 65.9 70 54.3
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 4.2e-09 64.7 70 54.3
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 7.1e-09 63.9 70 51.4
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 1.6e-08 62.8 70 52.9
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 1.6e-08 62.8 69 58.0
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 1.6e-08 62.8 64 57.8
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 2.1e-08 62.4 70 52.9
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 2.1e-08 62.4 66 56.1
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 2.1e-08 62.4 70 54.3
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 2.1e-08 62.4 70 52.9
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 2.7e-08 62.0 70 51.4
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 3.5e-08 61.6 66 54.5
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 4.6e-08 61.2 66 54.5
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 4.6e-08 61.2 70 52.9
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 4.6e-08 61.2 70 52.9
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 4.6e-08 61.2 70 54.3
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 6.0e-08 60.8 69 53.6
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 6.0e-08 60.8 68 54.4
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 6.0e-08 60.8 68 54.4
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 1.0e-07 60.1 70 50.0
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 1.3e-07 59.7 64 56.2
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 1.7e-07 59.3 70 52.9
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 2.3e-07 58.9 70 51.4
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 2.3e-07 58.9 70 51.4
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 2.3e-07 58.9 70 51.4
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 2.3e-07 58.9 70 51.4
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 2.3e-07 58.9 70 51.4
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 2.3e-07 58.9 51 70.6
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 2.3e-07 58.9 66 56.1
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 2.3e-07 58.9 70 51.4
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 2.3e-07 58.9 70 51.4
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 3.0e-07 58.5 66 54.5
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 3.9e-07 58.2 75 50.7
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 3.9e-07 58.2 66 54.5
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 3.9e-07 58.2 70 50.0
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 5.1e-07 57.8 70 51.4
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 5.1e-07 57.8 66 51.5
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 5.1e-07 57.8 71 47.9
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 5.1e-07 57.8 68 51.5
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 5.1e-07 57.8 66 53.0
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 5.1e-07 57.8 66 53.0
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 6.6e-07 57.4 69 52.2
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 6.6e-07 57.4 68 50.0
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 6.6e-07 57.4 70 48.6
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 6.6e-07 57.4 66 50.0
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 6.6e-07 57.4 70 52.9
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 8.7e-07 57.0 70 50.0
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 8.7e-07 57.0 70 50.0
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 8.7e-07 57.0 70 50.0
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 8.7e-07 57.0 64 51.6
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 8.7e-07 57.0 70 48.6
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 8.7e-07 57.0 69 49.3
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 1.1e-06 56.6 70 48.6
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 1.5e-06 56.2 64 54.7
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.5e-06 56.2 70 48.6
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 1.9e-06 55.8 70 51.4
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 1.9e-06 55.8 70 48.6
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.5e-06 55.5 70 48.6
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 2.5e-06 55.5 67 50.7
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 3.3e-06 55.1 65 50.8
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 3.3e-06 55.1 70 48.6
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 4.3e-06 54.7 70 47.1
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 5.6e-06 54.3 69 49.3
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.6e-06 54.3 70 47.1
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 7.3e-06 53.9 70 48.6
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 7.3e-06 53.9 70 48.6
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 7.3e-06 53.9 68 50.0
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 7.3e-06 53.9 68 48.5
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 9.6e-06 53.5 70 48.6


User provided reference genes

Program Settings