Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g23633_MAGBIO Magnolia biondii HOM05D003657 ORTHO05D004286 2.5e-127 458.8 225 100.0
MBI15_g31118_MAGBIO Magnolia biondii HOM05D003657 ORTHO05D004286 1.2e-20 104.4 59 86.4
Potri.001G250200 Populus trichocarpa HOM05D003657 ORTHO05D004286 1.0e-11 74.7 96 42.7
Sabra16G0152200 Salix brachista HOM05D003657 ORTHO05D004286 2.2e-11 73.6 96 41.7
Ciclev10030030m.g Citrus clementina HOM05D003657 ORTHO05D004286 6.5e-11 72.0 94 42.6
QL01p037650 Quercus lobata HOM05D003657 ORTHO05D004286 6.5e-11 72.0 106 40.6
TWI14G1047 Tripterygium wilfordii HOM05D003657 ORTHO05D004286 1.1e-10 71.2 96 43.8
MELO3C025862.2 Cucumis melo HOM05D003657 ORTHO05D004286 1.9e-10 70.5 101 38.6
CSS0013743 Camellia sinensis var. sinensis HOM05D003657 ORTHO05D004286 4.2e-10 69.3 96 41.7
CSS0035662 Camellia sinensis var. sinensis HOM05D003657 ORTHO05D004286 4.2e-10 69.3 96 41.7
Hma1.2p1_0863F.1_g229980 Hydrangea macrophylla HOM05D003657 ORTHO05D004286 4.2e-10 69.3 96 42.7
Hma1.2p1_3301F.1_g335025 Hydrangea macrophylla HOM05D003657 ORTHO05D004286 4.2e-10 69.3 96 42.7
Nn2g13661 Nelumbo nucifera HOM05D003657 ORTHO05D004286 4.2e-10 69.3 53 66.0
Peaxi162Scf00540g00620 Petunia axillaris HOM05D003657 ORTHO05D004286 4.2e-10 69.3 108 36.1
GSVIVG01024772001 Vitis vinifera HOM05D003657 ORTHO05D004286 4.2e-10 69.3 108 36.1
Prupe.6G059500 Prunus persica HOM05D003657 ORTHO05D004286 5.5e-10 68.9 94 43.6
CsaV3_6G016310 Cucumis sativus L. HOM05D003657 ORTHO05D004286 7.2e-10 68.6 101 38.6
Nitab4.5_0005502g0010 Nicotiana tabacum HOM05D003657 ORTHO05D004286 7.2e-10 68.6 108 34.3
THA.LOC104816080 Tarenaya hassleriana HOM05D003657 ORTHO05D004286 7.2e-10 68.6 96 40.6
ATR0618G109 Amborella trichopoda HOM05D003657 ORTHO05D004286 9.4e-10 68.2 61 55.7
QL08p039443 Quercus lobata HOM05D003657 ORTHO05D004286 9.4e-10 68.2 50 64.0
Actinidia34451 Actinidia chinensis HOM05D003657 ORTHO05D004286 1.2e-09 67.8 95 40.0
PGSC0003DMG400030351 Solanum tuberosum HOM05D003657 ORTHO05D004286 1.2e-09 67.8 105 39.0
Actinidia23893 Actinidia chinensis HOM05D003657 ORTHO05D004286 1.6e-09 67.4 101 37.6
CAN.G394.117 Capsicum annuum HOM05D003657 ORTHO05D004286 1.6e-09 67.4 105 39.0
Hma1.2p1_0227F.1_g096420 Hydrangea macrophylla HOM05D003657 ORTHO05D004286 1.6e-09 67.4 108 37.0
Nitab4.5_0000010g0240 Nicotiana tabacum HOM05D003657 ORTHO05D004286 2.7e-09 66.6 105 39.0
CSS0012712 Camellia sinensis var. sinensis HOM05D003657 ORTHO05D004286 3.6e-09 66.2 96 40.6
CSS0017673 Camellia sinensis var. sinensis HOM05D003657 ORTHO05D004286 3.6e-09 66.2 54 59.3
CSS0030381 Camellia sinensis var. sinensis HOM05D003657 ORTHO05D004286 3.6e-09 66.2 54 59.3
Cpa.g.sc112.42 Carica papaya HOM05D003657 ORTHO05D004286 3.6e-09 66.2 53 60.4
MD03G1072700 Malus domestica HOM05D003657 ORTHO05D004286 3.6e-09 66.2 94 42.6
Solyc06g076860.4 Solanum lycopersicum HOM05D003657 ORTHO05D004286 3.6e-09 66.2 105 38.1
Sopen06g033250 Solanum pennellii HOM05D003657 ORTHO05D004286 3.6e-09 66.2 105 38.1
ClCG02G019640 Citrullus lanatus HOM05D003657 ORTHO05D004286 4.7e-09 65.9 101 37.6
Duzib168G2233 Durio zibethinus HOM05D003657 ORTHO05D004286 4.7e-09 65.9 102 42.2
Dinv28627 Davidia involucrata HOM05D003657 ORTHO05D004286 6.1e-09 65.5 88 42.0
TWI79G1454 Tripterygium wilfordii HOM05D003657 ORTHO05D004286 8.0e-09 65.1 94 41.5
CiPaw.14G060100 Carya illinoinensis HOM05D003657 ORTHO05D004286 1.0e-08 64.7 102 39.2
Cc01_g14050 Coffea canephora HOM05D003657 ORTHO05D004286 1.0e-08 64.7 107 34.6
DCAR_018959 Daucus carota HOM05D003657 ORTHO05D004286 1.0e-08 64.7 108 36.1
Sed0018588 Sechium edule HOM05D003657 ORTHO05D004286 1.4e-08 64.3 88 40.9
Gohir.D03G117100 Gossypium hirsutum HOM05D003657 ORTHO05D004286 3.0e-08 63.2 53 60.4
Gorai.003G123500 Gossypium raimondii HOM05D003657 ORTHO05D004286 3.0e-08 63.2 53 60.4
Nitab4.5_0000170g0210 Nicotiana tabacum HOM05D003657 ORTHO05D004286 3.0e-08 63.2 96 34.4
PSO339G1362 Papaver somniferum HOM05D003657 ORTHO05D004286 3.0e-08 63.2 187 28.9
Sc12g0000820 Simmondsia chinensis HOM05D003657 ORTHO05D004286 3.0e-08 63.2 85 41.2
THA.LOC104800725 Tarenaya hassleriana HOM05D003657 ORTHO05D004286 4.0e-08 62.8 96 35.4
Aqoxy4G02626 Aquilegia oxysepala HOM05D003657 ORTHO05D004286 5.2e-08 62.4 96 39.6
Nitab4.5_0000807g0050 Nicotiana tabacum HOM05D003657 ORTHO05D004286 5.2e-08 62.4 96 34.4
Cfa011669 Carpinus fangiana HOM05D003657 ORTHO05D004286 6.7e-08 62.0 95 38.9
Haze_24275 Corylus avellana HOM05D003657 ORTHO05D004286 8.8e-08 61.6 53 58.5
PSO384G3334 Papaver somniferum HOM05D003657 ORTHO05D004286 8.8e-08 61.6 185 28.6
Hund04875 Selenicereus undatus HOM05D003657 ORTHO05D004286 8.8e-08 61.6 105 32.4
Duzib170G0663 Durio zibethinus HOM05D003657 ORTHO05D004286 1.1e-07 61.2 108 37.0
MD11G1078800 Malus domestica HOM05D003657 ORTHO05D004286 1.1e-07 61.2 92 40.2
AT1G07270 Arabidopsis thaliana HOM05D003657 ORTHO05D004286 1.5e-07 60.8 54 55.6
Zm00001eb367100 Zea mays HOM05D003657 ORTHO05D004286 1.5e-07 60.8 106 34.0
FAN25G3712 Fragaria x ananassa HOM05D003657 ORTHO05D004286 2.0e-07 60.5 94 41.5
HanXRQChr17g0562071 Helianthus annuus HOM05D003657 ORTHO05D004286 2.0e-07 60.5 55 52.7
PGR102G3249 Punica granatum HOM05D003657 ORTHO05D004286 2.0e-07 60.5 102 37.3
RcHm_v2.0_Chr2g0157131 Rosa chinensis HOM05D003657 ORTHO05D004286 2.0e-07 60.5 94 41.5
RcHm_v2.0_Chr4g0399271 Rosa chinensis HOM05D003657 ORTHO05D004286 2.0e-07 60.5 94 41.5
FAN16G1802 Fragaria x ananassa HOM05D003657 ORTHO05D004286 2.6e-07 60.1 94 41.5
EL10Ac7g16143 Beta vulgaris HOM05D003657 ORTHO05D004286 3.3e-07 59.7 105 30.5
CARHR123010 Cardamine hirsuta HOM05D003657 ORTHO05D004286 3.3e-07 59.7 96 37.5
CiPaw.13G079800 Carya illinoinensis HOM05D003657 ORTHO05D004286 3.3e-07 59.7 114 35.1
Gohir.A03G050300 Gossypium hirsutum HOM05D003657 ORTHO05D004286 3.3e-07 59.7 53 58.5
RcHm_v2.0_Chr5g0068951 Rosa chinensis HOM05D003657 ORTHO05D004286 3.3e-07 59.7 102 42.2
FAN21G3798 Fragaria x ananassa HOM05D003657 ORTHO05D004286 4.4e-07 59.3 94 41.5
Lj2A1080T42 Lonicera japonica HOM05D003657 ORTHO05D004286 4.4e-07 59.3 108 36.1
AL1G17420 Arabidopsis lyrata HOM05D003657 ORTHO05D004286 5.7e-07 58.9 53 54.7
AUR62001671 Chenopodium quinoa HOM05D003657 ORTHO05D004286 5.7e-07 58.9 105 29.5
SalBow6G0197 Salvia bowleyana HOM05D003657 ORTHO05D004286 5.7e-07 58.9 113 35.4
Aqoxy2G02701 Aquilegia oxysepala HOM05D003657 ORTHO05D004286 7.5e-07 58.5 100 38.0
AL4G24450 Arabidopsis lyrata HOM05D003657 ORTHO05D004286 7.5e-07 58.5 54 51.9
Lsat_1_v5_gn_9_19501 Lactuca sativa HOM05D003657 ORTHO05D004286 7.5e-07 58.5 96 35.4
SGA_v2.0_scaffold28G11769 Striga asiatica HOM05D003657 ORTHO05D004286 7.5e-07 58.5 115 35.7
vmacro14588 Vaccinium macrocarpon HOM05D003657 ORTHO05D004286 7.5e-07 58.5 96 38.5
Thhalv10016540m.g Eutrema salsugineum HOM05D003657 ORTHO05D004286 9.7e-07 58.2 54 53.7
vmacro02979 Vaccinium macrocarpon HOM05D003657 ORTHO05D004286 9.7e-07 58.2 96 35.4
Thecc.09G304100 Theobroma cacao HOM05D003657 ORTHO05D004286 1.3e-06 57.8 52 55.8
Aa31LG5G6800 Aethionema arabicum HOM05D003657 ORTHO05D004286 2.2e-06 57.0 96 36.5
Rhsim01G0235900 Rhododendron simsii HOM05D003657 ORTHO05D004286 2.2e-06 57.0 54 57.4
Eucgr.B02268 Eucalyptus grandis HOM05D003657 ORTHO05D004286 2.8e-06 56.6 56 48.2
Oeu045526.2 Olea europaea HOM05D003657 ORTHO05D004286 2.8e-06 56.6 52 51.9
AT2G29680 Arabidopsis thaliana HOM05D003657 ORTHO05D004286 4.8e-06 55.8 54 50.0
BcaB01g03143 Brassica carinata HOM05D002033 ORTHO05D002181 4.8e-06 55.8 54 50.0
FvH4_3g38340 Fragaria vesca HOM05D003657 ORTHO05D004286 4.8e-06 55.8 94 39.4
FAN11G3726 Fragaria x ananassa HOM05D003657 ORTHO05D004286 4.8e-06 55.8 94 39.4
Os01g0856000 Oryza sativa ssp. japonica HOM05D003657 ORTHO05D004286 4.8e-06 55.8 87 36.8
Ah.08g221030 Amaranthus hybridus HOM05D003657 ORTHO05D004286 6.3e-06 55.5 52 46.2
ECA247G3640 Erigeron canadensis HOM05D003657 ORTHO05D004286 6.3e-06 55.5 91 35.2
HPP92_015512 Vanilla planifolia HOM05D003657 ORTHO05D004286 6.3e-06 55.5 94 33.0


User provided reference genes

Program Settings