Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.3e-191 672.9 353 100.0
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.3e-159 565.8 343 83.1
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 8.6e-159 563.9 343 83.4
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.0e-156 557.0 342 84.8
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 5.2e-156 554.7 335 85.4
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 8.9e-156 553.9 340 84.7
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 3.4e-155 552.0 343 83.7
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 3.4e-155 552.0 343 83.4
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 9.8e-155 550.4 317 86.4
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 9.8e-155 550.4 343 83.1
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.3e-154 550.1 344 80.8
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.7e-154 549.7 343 83.4
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 2.2e-154 549.3 336 83.6
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 2.9e-154 548.9 342 83.3
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.9e-154 548.1 329 82.7
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.4e-154 547.7 343 82.8
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.4e-153 546.6 341 81.2
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.8e-153 546.2 345 83.2
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 4.1e-153 545.0 351 81.8
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 7.0e-153 544.3 340 82.6
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.5e-152 542.0 339 82.6
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 7.8e-152 540.8 336 83.0
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 1.0e-151 540.4 334 81.7
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 1.0e-151 540.4 333 82.9
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 3.0e-151 538.9 342 81.6
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 3.0e-151 538.9 338 79.0
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 3.9e-151 538.5 342 82.2
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 6.6e-151 537.7 327 84.1
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 8.6e-151 537.3 329 83.3
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.1e-150 537.0 327 84.4
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 1.1e-150 537.0 332 82.5
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.1e-150 537.0 344 80.2
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 1.5e-150 536.6 345 80.3
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 1.9e-150 536.2 344 81.1
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 1.9e-150 536.2 344 81.1
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.9e-150 536.2 337 82.8
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 3.3e-150 535.4 329 82.1
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 4.3e-150 535.0 327 83.8
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.3e-150 535.0 327 83.8
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 4.3e-150 535.0 345 80.6
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 4.3e-150 535.0 336 81.0
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 4.3e-150 535.0 339 80.8
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 4.3e-150 535.0 343 81.3
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 7.3e-150 534.3 336 77.7
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 7.3e-150 534.3 345 80.6
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 7.3e-150 534.3 324 84.3
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 9.5e-150 533.9 334 82.6
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 9.5e-150 533.9 327 84.1
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 9.5e-150 533.9 342 81.3
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 9.5e-150 533.9 340 78.8
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 2.1e-149 532.7 341 79.8
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 2.8e-149 532.3 341 78.0
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 3.6e-149 531.9 337 77.4
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.7e-149 531.6 345 80.3
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 4.7e-149 531.6 355 78.0
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 6.2e-149 531.2 332 79.5
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.2e-149 531.2 327 84.1
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 1.0e-148 530.4 343 77.3
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.0e-148 530.4 340 78.5
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 2.3e-148 529.3 332 79.2
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 4.0e-148 528.5 309 84.1
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.0e-148 528.5 327 83.5
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 8.9e-148 527.3 337 79.2
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 8.9e-148 527.3 336 78.6
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 8.9e-148 527.3 318 82.4
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.2e-147 526.9 317 81.7
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 1.2e-147 526.9 310 82.9
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 1.5e-147 526.6 340 77.6
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 2.0e-147 526.2 329 80.5
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 2.6e-147 525.8 329 78.7
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 5.8e-147 524.6 316 81.3
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 9.8e-147 523.9 334 80.2
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.3e-146 523.5 344 79.1
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 1.7e-146 523.1 330 78.8
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.7e-146 521.9 340 76.8
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 4.9e-146 521.5 343 78.7
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 4.9e-146 521.5 311 80.4
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 4.9e-146 521.5 311 80.7
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.4e-145 520.0 344 79.1
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.4e-145 520.0 344 76.5
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 1.9e-145 519.6 346 79.2
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 1.9e-145 519.6 341 80.1
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.4e-145 519.2 313 82.1
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 3.2e-145 518.8 341 79.8
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 3.2e-145 518.8 341 79.8
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 7.0e-145 517.7 315 81.9
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 7.0e-145 517.7 315 81.9
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 7.0e-145 517.7 315 81.9
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 7.0e-145 517.7 320 79.4
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 1.2e-144 516.9 337 79.8
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.2e-144 516.9 335 77.3
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 1.6e-144 516.5 331 79.2
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.6e-144 516.5 337 76.6
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.6e-144 516.5 332 76.2
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 2.7e-144 515.8 339 79.6
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 7.8e-144 514.2 339 76.4
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 7.8e-144 514.2 338 77.5
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.3e-143 513.5 338 75.7
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 1.3e-143 513.5 333 75.4
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 1.3e-143 513.5 338 77.2
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 1.7e-143 513.1 338 76.9
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 2.3e-143 512.7 325 77.5
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.3e-143 512.7 318 80.8
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 3.0e-143 512.3 340 79.1
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 3.9e-143 511.9 335 75.8
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 5.0e-143 511.5 331 76.4
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 8.6e-143 510.8 333 75.1
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 8.6e-143 510.8 318 80.2
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 1.9e-142 509.6 335 76.1
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 2.5e-142 509.2 335 75.8
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 4.3e-142 508.4 359 72.7
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 7.3e-142 507.7 332 75.3
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 1.6e-141 506.5 336 76.8
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 3.1e-140 502.3 301 79.4
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 6.8e-140 501.1 336 74.1
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 3.4e-139 498.8 338 74.6
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 1.3e-138 496.9 314 78.0
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 6.4e-138 494.6 330 75.2
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 5.4e-137 491.5 337 72.7
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 6.0e-136 488.0 427 63.0
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 7.8e-136 487.6 314 76.8
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 1.3e-135 486.9 310 78.4
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 2.8e-133 479.2 302 76.8
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.3e-132 476.1 343 75.5
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 5.2e-132 474.9 372 67.5
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.9e-131 470.7 294 84.4
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 4.9e-130 468.4 315 73.7
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 4.9e-130 468.4 271 83.4
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.2e-129 465.7 330 74.8
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 5.1e-127 458.4 342 73.7
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 2.5e-126 456.1 288 78.5
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 7.3e-126 454.5 338 73.1
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 4.7e-125 451.8 269 86.6
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 7.6e-123 444.5 270 82.6
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 7.6e-123 444.5 342 62.9
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 2.9e-122 442.6 327 66.1
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 3.8e-122 442.2 315 72.4
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.9e-119 432.2 324 64.5
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.1e-117 426.4 325 62.5
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 4.8e-117 425.2 328 63.7
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.1e-116 424.1 348 67.0
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.6e-115 419.5 307 66.1
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 4.9e-114 415.2 331 68.3
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.7e-112 409.5 316 61.7
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 6.7e-111 404.8 308 66.2
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 7.6e-107 391.3 397 54.9
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 3.8e-106 389.0 300 67.0
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 2.1e-104 383.3 223 83.4
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.1e-97 360.9 231 77.5
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 8.2e-93 344.7 301 57.5
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.8e-85 319.7 237 66.2
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 2.1e-80 303.5 246 68.3
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 1.1e-65 254.6 152 82.2
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 4.7e-64 249.2 332 47.0
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 4.5e-59 232.6 163 77.9
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 2.7e-56 223.4 185 61.6
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 7.8e-43 178.7 164 57.9
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 2.7e-35 153.7 97 79.4
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 8.3e-29 132.1 282 31.9
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 1.9e-28 131.0 97 69.1
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 2.7e-27 127.1 335 30.7
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 2.6e-22 110.5 65 76.9
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.3e-21 108.2 243 36.2
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 3.7e-21 106.7 285 27.4
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 1.9e-20 104.4 69 78.3
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 1.9e-20 104.4 69 78.3
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 4.1e-20 103.2 69 78.3
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 4.3e-17 93.2 59 76.3
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.2e-16 91.7 64 70.3
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.4e-15 87.4 376 25.0
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 4.1e-12 76.6 61 82.0
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 9.2e-12 75.5 60 81.7
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.5e-09 68.2 108 33.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 3.3e-09 67.0 33 90.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 1.6e-08 64.7 35 80.0
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 8.1e-08 62.4 41 70.7
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 1.4e-07 61.6 41 68.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 2.4e-07 60.8 39 71.8
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 2.6e-06 57.4 50 60.0


User provided reference genes

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