Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g23324_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 1.3e-235 819.3 398 100.0
MBI03_g45449_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 5.3e-125 451.8 224 97.3
MBI05_g11249_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 3.8e-78 296.2 229 69.9
Gohir.A01G002800 Gossypium hirsutum HOM05D017124 ORTHO05D017284 1.2e-28 131.7 85 78.8
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 6.7e-27 125.9 268 35.1
Nitab4.5_0000085g0170 Nicotiana tabacum HOM05D011968 ORTHO05D014241 2.2e-25 120.9 84 72.6
Nitab4.5_0005831g0080 Nicotiana tabacum HOM05D011968 ORTHO05D014241 3.1e-24 117.1 84 69.0
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 1.9e-21 107.8 234 35.5
MBI14_g44091_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 7.2e-21 105.9 147 44.9
Nitab4.5_0002093g0160 Nicotiana tabacum HOM05D011968 ORTHO05D014241 4.4e-18 96.7 82 63.4
Nitab4.5_0012260g0040 Nicotiana tabacum HOM05D002660 ORTHO05D003902 6.3e-17 92.8 169 37.9
TAR626G0574 Trochodendron aralioides HOM05D002660 ORTHO05D003902 1.4e-16 91.7 181 37.0
Gorai.001G165500 Gossypium raimondii HOM05D011380 ORTHO05D016005 4.1e-16 90.1 125 52.0
Cfa021334 Carpinus fangiana HOM05D002660 ORTHO05D003902 4.5e-15 86.7 153 37.3
Nitab4.5_0013560g0040 Nicotiana tabacum HOM05D011968 ORTHO05D014241 5.9e-15 86.3 103 52.4
ECA039G0027 Erigeron canadensis HOM05D017124 ORTHO05D017284 5.0e-14 83.2 79 51.9
ECA247G3849 Erigeron canadensis HOM05D000031 ORTHO05D000030 5.0e-14 83.2 79 51.9
Actinidia02791 Actinidia chinensis HOM05D002660 ORTHO05D003902 3.6e-12 77.0 249 32.9
Nitab4.5_0010333g0110 Nicotiana tabacum HOM05D011968 ORTHO05D014241 3.6e-12 77.0 47 78.7
MBI05_g42004_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 8.0e-12 75.9 39 89.7
Nitab4.5_0000844g0150 Nicotiana tabacum HOM05D011968 ORTHO05D014241 2.3e-11 74.3 48 75.0
Nitab4.5_0010586g0020 Nicotiana tabacum HOM05D011968 ORTHO05D014241 4.0e-11 73.6 93 50.5
Nitab4.5_0000031g0200 Nicotiana tabacum HOM05D002660 ORTHO05D003902 5.2e-11 73.2 164 32.9
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 5.2e-11 73.2 232 29.3
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 6.8e-11 72.8 193 33.7
MBI05_g05346_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.2e-10 72.0 181 29.8
Nitab4.5_0004300g0080 Nicotiana tabacum HOM05D011968 ORTHO05D014241 3.4e-10 70.5 112 43.8
CSS0017389 Camellia sinensis var. sinensis HOM05D002660 ORTHO05D003902 5.7e-10 69.7 101 46.5
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 5.7e-10 69.7 216 28.7
ECA232G0326 Erigeron canadensis HOM05D017124 ORTHO05D017284 5.7e-10 69.7 69 50.7
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 5.7e-10 69.7 147 36.7
Nitab4.5_0010333g0140 Nicotiana tabacum HOM05D011968 ORTHO05D014241 9.8e-10 68.9 80 48.8
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 2.8e-09 67.4 184 31.5
Peaxi162Scf01528g00009 Petunia axillaris HOM05D010952 ORTHO05D017366 1.1e-08 65.5 104 43.3
Nitab4.5_0001607g0070 Nicotiana tabacum HOM05D002660 ORTHO05D003902 2.4e-08 64.3 139 36.7
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 3.1e-08 63.9 179 30.2
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 9.1e-08 62.4 154 28.6
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 9.1e-08 62.4 169 36.7
CsaV3_UNG207980 Cucumis sativus L. HOM05D002660 ORTHO05D003902 1.2e-07 62.0 187 28.3
CAN.G841.4 Capsicum annuum HOM05D002660 ORTHO05D003902 2.0e-07 61.2 173 29.5
TAR371G0124 Trochodendron aralioides HOM05D002660 ORTHO05D003902 2.0e-07 61.2 98 42.9
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 3.5e-07 60.5 178 28.1
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.5e-07 60.5 168 28.6
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.5e-07 60.5 168 28.6
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 3.5e-07 60.5 168 28.6
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 1.0e-06 58.9 103 40.8
MBI14_g38258_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.3e-06 58.5 80 42.5
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 1.7e-06 58.2 139 36.7
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 1.7e-06 58.2 86 41.9
Nitab4.5_0000172g0790 Nicotiana tabacum HOM05D011968 ORTHO05D014241 2.2e-06 57.8 63 58.7
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.2e-06 57.8 153 29.4
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.2e-06 57.8 153 29.4
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.2e-06 57.8 153 29.4
Solyc11g063540.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.2e-06 57.8 153 29.4
CAN.G1001.30 Capsicum annuum HOM05D002660 ORTHO05D003902 5.0e-06 56.6 171 27.5
Nitab4.5_0017902g0020 Nicotiana tabacum HOM05D002660 ORTHO05D003902 5.0e-06 56.6 98 38.8
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 8.5e-06 55.8 139 36.0


User provided reference genes

Program Settings