Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 1.2e-97 359.8 170 100.0
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 3.0e-93 345.1 170 97.1
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 3.0e-93 345.1 170 97.1
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 5.1e-93 344.4 169 98.2
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.3e-91 339.7 170 95.3
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.3e-91 339.7 170 95.3
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 4.8e-91 337.8 170 95.3
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 4.8e-91 337.8 170 95.3
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 4.8e-91 337.8 170 95.3
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 4.8e-91 337.8 170 95.3
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 8.2e-91 337.0 170 95.3
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 8.2e-91 337.0 170 95.3
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 1.1e-90 336.7 166 96.4
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 1.4e-90 336.3 170 94.7
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 2.4e-90 335.5 170 94.7
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 3.1e-90 335.1 170 95.3
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 5.3e-90 334.3 170 94.1
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 1.5e-89 332.8 170 94.7
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 1.5e-89 332.8 170 94.7
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 1.5e-89 332.8 170 94.7
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.5e-89 332.8 170 94.7
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 1.5e-89 332.8 170 94.7
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 3.4e-89 331.6 170 94.1
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 3.4e-89 331.6 170 94.1
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 7.7e-89 330.5 170 94.1
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 7.7e-89 330.5 168 94.0
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 7.7e-89 330.5 168 94.6
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 7.7e-89 330.5 168 94.6
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 7.7e-89 330.5 170 94.1
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 7.7e-89 330.5 170 94.1
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 1.3e-88 329.7 170 93.5
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 1.7e-88 329.3 170 94.1
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 1.7e-88 329.3 170 94.1
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 1.7e-88 329.3 170 94.1
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 1.7e-88 329.3 170 92.9
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 2.2e-88 328.9 170 93.5
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 5.0e-88 327.8 169 94.1
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 5.0e-88 327.8 168 94.0
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 6.5e-88 327.4 169 93.5
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 8.5e-88 327.0 170 93.5
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.9e-87 325.9 170 92.4
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 2.5e-87 325.5 170 92.4
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 5.5e-87 324.3 170 91.8
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 5.5e-87 324.3 170 92.4
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 1.2e-86 323.2 167 93.4
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 2.7e-86 322.0 170 91.8
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.8e-85 319.3 167 91.0
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.2e-85 317.8 167 90.4
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-83 311.2 170 88.8
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 1.1e-82 310.1 164 90.9
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 1.1e-82 310.1 164 90.9
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.4e-82 308.9 167 89.2
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 5.9e-81 304.3 170 87.6
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 7.7e-81 303.9 158 91.8
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-80 302.4 163 89.6
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-80 301.6 167 86.8
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.5e-79 299.7 166 88.0
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 1.9e-79 299.3 170 87.1
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 6.7e-77 290.8 166 84.9
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 7.5e-76 287.3 153 90.8
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 4.8e-75 284.6 144 94.4
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-74 283.1 170 81.2
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 3.1e-74 282.0 144 94.4
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-73 278.1 169 82.8
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 5.9e-73 277.7 164 83.5
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 1.3e-72 276.6 170 80.6
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.7e-72 276.2 170 80.0
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 2.2e-72 275.8 140 95.7
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 8.5e-72 273.9 141 94.3
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 8.5e-72 273.9 141 94.3
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 8.0e-70 267.3 135 94.8
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.0e-69 266.9 163 80.4
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-67 259.2 138 92.0
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-67 258.5 147 85.7
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 1.4e-66 256.5 170 78.2
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 1.8e-66 256.1 170 78.2
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-65 252.3 135 90.4
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-63 246.9 144 84.7
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-63 245.7 138 87.7
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-63 245.7 138 87.7
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 9.5e-63 243.8 141 83.7
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-62 242.7 143 83.2
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-62 242.3 132 88.6
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-61 238.4 138 84.8
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-61 237.3 131 87.0
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 9.8e-60 233.8 167 69.5
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 7.0e-58 227.6 130 86.9
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-57 225.7 136 83.1
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-54 214.9 138 81.2
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-52 209.1 127 81.9
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.9e-51 205.7 109 90.8
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-51 205.3 133 77.4
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-51 205.3 133 78.2
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 6.4e-51 204.5 138 75.4
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-50 203.8 112 87.5
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.4e-50 203.4 99 97.0
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 1.4e-50 203.4 123 83.7
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 7.8e-49 197.6 100 94.0
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 7.8e-49 197.6 132 77.3
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 5.0e-48 194.9 99 93.9
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 2.5e-47 192.6 132 76.5
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 3.3e-47 192.2 97 93.8
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 4.3e-47 191.8 96 94.8
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.1e-45 185.7 102 87.3
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 4.0e-45 185.3 145 59.3
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-44 183.7 115 81.7
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 7.5e-44 181.0 146 56.8
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 2.9e-43 179.1 93 93.5
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 6.4e-43 177.9 100 86.0
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 3.5e-41 172.2 89 92.1
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 7.8e-41 171.0 99 83.8
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 6.6e-40 167.9 87 94.3
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 8.6e-40 167.5 164 57.3
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-39 166.4 94 85.1
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.3e-39 165.6 101 80.2
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.6e-38 163.3 127 67.7
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 2.1e-38 162.9 79 94.9
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-37 157.5 87 83.9
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-37 157.5 87 83.9
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-36 156.0 129 64.3
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-35 153.7 132 62.1
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-35 153.7 170 51.2
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 6.4e-35 151.4 74 95.9
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 6.4e-35 151.4 74 95.9
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 6.4e-35 151.4 74 95.9
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 6.4e-35 151.4 74 95.9
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.1e-34 150.6 153 50.3
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 4.1e-34 148.7 74 94.6
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 4.1e-34 148.7 74 94.6
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 4.6e-33 145.2 91 78.0
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 1.3e-32 143.7 72 91.7
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 1.1e-31 140.6 71 91.5
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-31 138.3 75 88.0
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 7.3e-31 137.9 81 81.5
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.8e-30 136.0 72 88.9
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-30 135.6 74 86.5
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 8.1e-30 134.4 74 86.5
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.1e-29 134.0 74 85.1
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-29 133.7 124 61.3
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-29 133.7 124 61.3
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-29 133.3 74 86.5
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-29 132.9 74 85.1
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-29 132.5 74 85.1
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-29 131.7 70 88.6
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-28 129.8 72 86.1
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.0e-28 129.8 144 53.5
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-28 128.6 74 83.8
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-27 126.7 72 83.3
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-27 124.4 74 82.4
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-26 123.2 74 82.4
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-26 122.1 71 83.1
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 4.1e-26 122.1 91 69.2
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.2e-25 120.6 122 55.7
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-25 119.0 74 79.7
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 4.6e-25 118.6 64 87.5
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.2e-22 110.5 69 78.3
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.6e-22 109.0 64 81.2
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 1.2e-20 104.0 61 86.9
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-20 104.0 70 78.6
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 1.4e-18 97.1 47 91.5
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.1e-17 93.2 49 87.8
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 6.6e-16 88.2 52 84.6
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-15 87.4 111 47.7
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-15 87.0 69 65.2
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 9.6e-15 84.3 44 90.9
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 9.9e-12 74.3 36 94.4
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.3e-11 73.9 45 75.6
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 7.1e-10 68.2 50 68.0
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-09 66.2 100 46.0
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 1.8e-08 63.5 35 82.9
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 5.1e-08 62.0 29 93.1
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-07 60.5 34 82.4
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 2.5e-07 59.7 34 79.4
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-07 59.7 60 56.7
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 3.7e-06 55.8 30 86.7


User provided reference genes

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