Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g15475_MAGBIO Magnolia biondii HOM05D005751 ORTHO05D007198 5.1e-37 157.1 74 100.0
CANSAT56G3008 Cannabis sativa HOM05D005751 ORTHO05D007198 1.4e-34 149.1 73 93.2
PSO210G0920 Papaver somniferum HOM05D005751 ORTHO05D007198 3.1e-34 147.9 73 91.8
PSO210G7392 Papaver somniferum HOM05D005751 ORTHO05D007198 5.2e-34 147.1 73 91.8
MSTRG.19491 Avicennia marina HOM05D005751 ORTHO05D007198 8.9e-34 146.4 74 90.5
Aa31LG3G12940 Aethionema arabicum HOM05D005751 ORTHO05D007198 1.2e-33 146.0 72 90.3
Aqoxy7G04004 Aquilegia oxysepala HOM05D005751 ORTHO05D007198 1.5e-33 145.6 72 90.3
Hund08697 Selenicereus undatus HOM05D005751 ORTHO05D007198 1.5e-33 145.6 73 90.4
GSVIVG01015161001 Vitis vinifera HOM05D005751 ORTHO05D007198 1.5e-33 145.6 73 90.4
Ciclev10009538m.g Citrus clementina HOM05D005751 ORTHO05D007198 2.0e-33 145.2 73 90.4
Zm00001eb032820 Zea mays HOM05D005751 ORTHO05D007198 2.0e-33 145.2 72 90.3
AT5G57040 Arabidopsis thaliana HOM05D005751 ORTHO05D007198 2.6e-33 144.8 72 90.3
Glyma.13G106600 Glycine max HOM05D005751 ORTHO05D007198 2.6e-33 144.8 73 89.0
AL8G32950 Arabidopsis lyrata HOM05D005751 ORTHO05D007198 3.4e-33 144.4 72 90.3
BcaB01g04441 Brassica carinata HOM05D005751 ORTHO05D007198 3.4e-33 144.4 72 90.3
Migut.J00571 Erythranthe guttata HOM05D005751 ORTHO05D007198 3.4e-33 144.4 74 89.2
Lj4g0012446 Lotus japonicus HOM05D005751 ORTHO05D007198 3.4e-33 144.4 73 87.7
Os07g0160400 Oryza sativa ssp. japonica HOM05D005751 ORTHO05D007198 3.4e-33 144.4 72 90.3
TAR624G1021 Trochodendron aralioides HOM05D005751 ORTHO05D007198 3.4e-33 144.4 73 89.0
Actinidia39706 Actinidia chinensis HOM05D005751 ORTHO05D007198 4.4e-33 144.1 73 89.0
Carub.0008s1755 Capsella rubella HOM05D005751 ORTHO05D007198 4.4e-33 144.1 72 88.9
Cpa.g.sc28.129 Carica papaya HOM05D005751 ORTHO05D007198 4.4e-33 144.1 73 89.0
Prupe.7G205300 Prunus persica HOM05D005751 ORTHO05D007198 4.4e-33 144.1 73 89.0
QL02p061913 Quercus lobata HOM05D005751 ORTHO05D007198 4.4e-33 144.1 73 89.0
SGA_v2.0_scaffold91G28064 Striga asiatica HOM05D005751 ORTHO05D007198 4.4e-33 144.1 74 89.2
Dinv36789 Davidia involucrata HOM05D005751 ORTHO05D007198 5.8e-33 143.7 73 87.7
BcaC04g20019 Brassica carinata HOM05D005751 ORTHO05D007198 7.6e-33 143.3 72 88.9
BolC9t57719H Brassica oleracea HOM05D005751 ORTHO05D007198 7.6e-33 143.3 72 88.9
BraA10t43528Z Brassica rapa HOM05D005751 ORTHO05D007198 7.6e-33 143.3 72 88.9
Thhalv10014727m.g Eutrema salsugineum HOM05D005751 ORTHO05D007198 7.6e-33 143.3 72 88.9
Nitab4.5_0001519g0150 Nicotiana tabacum HOM05D005751 ORTHO05D007198 7.6e-33 143.3 73 87.7
Sc18g0002310 Simmondsia chinensis HOM05D005751 ORTHO05D007198 7.6e-33 143.3 73 89.0
VMungo1215G3373 Vigna mungo HOM05D005751 ORTHO05D007198 7.6e-33 143.3 73 89.0
CiPaw.03G211900 Carya illinoinensis HOM05D005751 ORTHO05D007198 9.9e-33 142.9 73 87.7
CsaV3_1G040650 Cucumis sativus L. HOM05D005751 ORTHO05D007198 9.9e-33 142.9 73 87.7
Manes.16G099500 Manihot esculenta HOM05D005751 ORTHO05D007198 9.9e-33 142.9 73 87.7
Oeu051302.1 Olea europaea HOM05D005751 ORTHO05D007198 9.9e-33 142.9 74 87.8
Sp6g18760 Schrenkiella parvula HOM05D005751 ORTHO05D007198 9.9e-33 142.9 72 88.9
BcaC01g06463 Brassica carinata HOM05D005751 ORTHO05D007198 1.3e-32 142.5 72 88.9
A03p13000 Brassica napus HOM05D005751 ORTHO05D007198 1.3e-32 142.5 72 88.9
C03p15170 Brassica napus HOM05D005751 ORTHO05D007198 1.3e-32 142.5 72 88.9
BolC3t13958H Brassica oleracea HOM05D005751 ORTHO05D007198 1.3e-32 142.5 72 88.9
BraA03t10610Z Brassica rapa HOM05D005751 ORTHO05D007198 1.3e-32 142.5 72 88.9
Glyma.17G052700 Glycine max HOM05D005751 ORTHO05D007198 1.3e-32 142.5 73 89.0
Lalb_Chr12g0199911 Lupinus albus HOM05D005751 ORTHO05D007198 1.3e-32 142.5 73 86.3
arahy.Tifrunner.gnm1.ann1.9N5J50 Arachis hypogaea HOM05D005751 ORTHO05D007198 1.7e-32 142.1 73 89.0
arahy.Tifrunner.gnm1.ann1.ZDQ9N1 Arachis hypogaea HOM05D005751 ORTHO05D007198 1.7e-32 142.1 73 89.0
MELO3C015494.2 Cucumis melo HOM05D005751 ORTHO05D007198 1.7e-32 142.1 73 87.7
Duzib168G1813 Durio zibethinus HOM05D005751 ORTHO05D007198 1.7e-32 142.1 73 87.7
Medtr4g125860 Medicago truncatula HOM05D005751 ORTHO05D007198 1.7e-32 142.1 73 84.9
Nitab4.5_0006861g0030 Nicotiana tabacum HOM05D005751 ORTHO05D007198 1.7e-32 142.1 73 87.7
Potri.018G056200 Populus trichocarpa HOM05D005751 ORTHO05D007198 1.7e-32 142.1 73 87.7
HPP92_020002 Vanilla planifolia HOM05D005751 ORTHO05D007198 1.7e-32 142.1 74 87.8
EL10Ac8g19167 Beta vulgaris HOM05D005751 ORTHO05D007198 2.2e-32 141.7 73 86.3
COL.COLO4_18163 Corchorus olitorius HOM05D005751 ORTHO05D007198 2.2e-32 141.7 72 88.9
ATR1153G002 Amborella trichopoda HOM05D005751 ORTHO05D007198 2.9e-32 141.4 74 85.1
Cc06_g11700 Coffea canephora HOM05D005751 ORTHO05D007198 2.9e-32 141.4 73 86.3
BcaB08g36014 Brassica carinata HOM05D005751 ORTHO05D007198 3.8e-32 141.0 72 86.1
A10p14370 Brassica napus HOM05D005751 ORTHO05D007198 3.8e-32 141.0 72 87.5
CAN.G235.10 Capsicum annuum HOM05D005751 ORTHO05D007198 3.8e-32 141.0 73 86.3
Ca_21296_v3 Cicer arietinum L. HOM05D005751 ORTHO05D007198 3.8e-32 141.0 73 84.9
Duzib150G0581 Durio zibethinus HOM05D005751 ORTHO05D007198 3.8e-32 141.0 73 86.3
ECA234G1336 Erigeron canadensis HOM05D005751 ORTHO05D007198 3.8e-32 141.0 74 86.5
Hma1.2p1_0169F.1_g074820 Hydrangea macrophylla HOM05D005751 ORTHO05D007198 3.8e-32 141.0 73 86.3
Hma1.2p1_0169F.1_g074830 Hydrangea macrophylla HOM05D005751 ORTHO05D007198 3.8e-32 141.0 73 86.3
PGSC0003DMG400010712 Solanum tuberosum HOM05D005751 ORTHO05D007198 3.8e-32 141.0 73 86.3
Thecc.09G083800 Theobroma cacao HOM05D005751 ORTHO05D007198 3.8e-32 141.0 73 87.7
ClCG03G015400 Citrullus lanatus HOM05D005751 ORTHO05D007198 4.9e-32 140.6 73 87.7
Haze_25944 Corylus avellana HOM05D005751 ORTHO05D007198 4.9e-32 140.6 74 86.5
DCAR_028277 Daucus carota HOM05D005751 ORTHO05D007198 4.9e-32 140.6 73 86.3
Eucgr.C03409 Eucalyptus grandis HOM05D005751 ORTHO05D007198 4.9e-32 140.6 73 84.9
Peaxi162Scf00494g00510 Petunia axillaris HOM05D005751 ORTHO05D007198 4.9e-32 140.6 73 87.7
Sed0022874 Sechium edule HOM05D005751 ORTHO05D007198 4.9e-32 140.6 73 86.3
Solyc07g040950.3 Solanum lycopersicum HOM05D005751 ORTHO05D007198 4.9e-32 140.6 73 86.3
Sopen07g020020 Solanum pennellii HOM05D005751 ORTHO05D007198 4.9e-32 140.6 73 86.3
CARHR270800 Cardamine hirsuta HOM05D005751 ORTHO05D007198 6.4e-32 140.2 72 86.1
Cfa003053 Carpinus fangiana HOM05D005751 ORTHO05D007198 8.4e-32 139.8 74 86.5
Gohir.D06G072800 Gossypium hirsutum HOM05D005751 ORTHO05D007198 8.4e-32 139.8 72 87.5
Phvul.003G134400 Phaseolus vulgaris HOM05D005751 ORTHO05D007198 8.4e-32 139.8 73 84.9
TWI34G0035 Tripterygium wilfordii HOM05D005751 ORTHO05D007198 8.4e-32 139.8 73 84.9
Sabra06G0116100 Salix brachista HOM05D005751 ORTHO05D007198 1.1e-31 139.4 73 86.3
THA.LOC104811753 Tarenaya hassleriana HOM05D005751 ORTHO05D007198 1.1e-31 139.4 72 83.3
unitig_0.g2267 Utricularia gibba HOM05D005751 ORTHO05D007198 1.1e-31 139.4 71 87.3
Gohir.A06G073900 Gossypium hirsutum HOM05D005751 ORTHO05D007198 2.4e-31 138.3 72 86.1
AUR62009007 Chenopodium quinoa HOM05D005751 ORTHO05D007198 3.2e-31 137.9 72 84.7
AUR62023295 Chenopodium quinoa HOM05D005751 ORTHO05D007198 3.2e-31 137.9 72 84.7
AUR62044275 Chenopodium quinoa HOM05D005751 ORTHO05D007198 3.2e-31 137.9 72 84.7
Lsat_1_v5_gn_5_143221 Lactuca sativa HOM05D005751 ORTHO05D007198 3.2e-31 137.9 73 83.6
MD15G1211500 Malus domestica HOM05D005751 ORTHO05D007198 3.2e-31 137.9 72 87.5
CSS0015550 Camellia sinensis var. sinensis HOM05D005751 ORTHO05D007198 5.4e-31 137.1 73 82.2
Mapoly0070s0082 Marchantia polymorpha HOM05D005751 ORTHO05D007198 7.1e-31 136.7 72 83.3
HanXRQChr12g0354491 Helianthus annuus HOM05D005751 ORTHO05D007198 9.3e-31 136.3 72 83.3
CDE04G1502 Ceratophyllum demersum HOM05D005751 ORTHO05D007198 1.2e-30 136.0 72 87.5
VMungo1215G1838 Vigna mungo HOM05D005751 ORTHO05D007198 1.2e-30 136.0 73 83.6
CDE02G0045 Ceratophyllum demersum HOM05D005751 ORTHO05D007198 4.6e-30 134.0 72 86.1
vmacro17149 Vaccinium macrocarpon HOM05D005751 ORTHO05D007198 7.8e-30 133.3 73 80.8
FvH4_1g07980 Fragaria vesca HOM05D005751 ORTHO05D007198 1.3e-29 132.5 71 83.1
Rhsim05G0015000 Rhododendron simsii HOM05D005751 ORTHO05D007198 1.3e-29 132.5 73 82.2
SalBow6G2198 Salvia bowleyana HOM05D005751 ORTHO05D007198 1.3e-29 132.5 79 78.5
Ah.09g227980 Amaranthus hybridus HOM05D005751 ORTHO05D007198 2.3e-29 131.7 73 78.1
Pp3c3_33270 Physcomitrium patens HOM05D005751 ORTHO05D007198 3.0e-29 131.3 72 75.0
PGR102G3219 Punica granatum HOM05D005751 ORTHO05D007198 3.0e-29 131.3 73 79.5
Pp3c4_10740 Physcomitrium patens HOM05D005751 ORTHO05D007198 4.3e-28 127.5 72 77.8
SMO356G0241 Selaginella moellendorffii HOM05D005751 ORTHO05D007198 4.3e-28 127.5 71 77.5
CBR_g3298 Chara braunii HOM05D005751 ORTHO05D007198 5.6e-28 127.1 72 75.0
Nn6g35546 Nelumbo nucifera HOM05D005751 ORTHO05D007198 7.6e-25 116.7 61 85.2
Cre10.g466500 Chlamydomonas reinhardtii HOM05D005751 ORTHO05D007198 2.1e-22 108.6 73 64.4
PRCOL_00003968 Prasinoderma coloniale HOM05D005751 ORTHO05D007198 2.1e-22 108.6 72 62.5
AagrBONN_evm.TU.Sc2ySwM_228.5761 Anthoceros agrestis HOM05D005751 ORTHO05D007198 6.6e-21 103.6 70 62.9
Mapoly0083s0052 Marchantia polymorpha HOM05D005751 ORTHO05D007198 3.6e-19 97.8 72 59.7
MCO05G344 Micromonas commoda HOM05D005751 ORTHO05D007198 6.2e-19 97.1 73 57.5
Psat0s1725g0120 Pisum sativum HOM05D005751 ORTHO05D007198 3.1e-18 94.7 50 82.0
Atru.chr7.1637 Acer truncatum HOM05D005751 ORTHO05D007198 7.6e-17 90.1 46 87.0
Mapoly0078s0028 Marchantia polymorpha HOM05D005751 ORTHO05D007198 1.3e-16 89.4 71 54.9
Gorai.010G084800 Gossypium raimondii HOM05D005751 ORTHO05D007198 2.2e-16 88.6 44 86.4
FAN23G0534 Fragaria x ananassa HOM05D005751 ORTHO05D007198 6.4e-16 87.0 71 63.4
FAN26G0267 Fragaria x ananassa HOM05D005751 ORTHO05D007198 6.4e-16 87.0 71 63.4
FAN26G0888 Fragaria x ananassa HOM05D005751 ORTHO05D007198 6.4e-16 87.0 71 63.4
FAN28G0463 Fragaria x ananassa HOM05D005751 ORTHO05D007198 8.4e-16 86.7 44 81.8
RcHm_v2.0_Chr2g0093891 Rosa chinensis HOM05D005751 ORTHO05D007198 8.4e-16 86.7 44 81.8
RcHm_v2.0_Chr2g0094011 Rosa chinensis HOM05D005751 ORTHO05D007198 8.4e-16 86.7 44 81.8
MD02G1084200 Malus domestica HOM05D005751 ORTHO05D007198 1.4e-15 85.9 44 84.1
C09p48710 Brassica napus HOM05D005751 ORTHO05D007198 7.1e-15 83.6 41 85.4
SEGI_26166 Sequoiadendron giganteum HOM05D005751 ORTHO05D007198 1.2e-14 82.8 42 78.6
Gohir.A07G143100 Gossypium hirsutum HOM05D005751 ORTHO05D007198 2.1e-14 82.0 45 75.6
TPR.G20403 Trifolium pratense HOM05D005751 ORTHO05D007198 1.3e-13 79.3 37 86.5
Gohir.A03G138566 Gossypium hirsutum HOM05D005751 ORTHO05D007198 6.7e-13 77.0 45 71.1
AUR62029026 Chenopodium quinoa HOM05D005751 ORTHO05D007198 1.5e-12 75.9 41 78.0
FAN19G0250 Fragaria x ananassa HOM05D005751 ORTHO05D007198 2.8e-11 71.6 33 84.8
BcaNung07292 Brassica carinata HOM05D005751 ORTHO05D007198 5.3e-10 67.4 35 82.9


User provided reference genes

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