Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.2e-163 579.7 283 100.0
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.7e-101 373.2 221 84.2
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.7e-35 152.9 111 72.1
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 1.4e-26 124.4 108 62.0
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 5.3e-26 122.5 97 62.9
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 9.0e-26 121.7 74 81.1
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 1.5e-25 120.9 141 49.6
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 2.0e-25 120.6 106 60.4
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 3.4e-25 119.8 131 49.6
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 3.4e-25 119.8 101 64.4
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 5.8e-25 119.0 130 53.1
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 5.8e-25 119.0 132 53.0
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 5.8e-25 119.0 120 53.3
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 5.8e-25 119.0 103 58.3
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 1.0e-24 118.2 108 56.5
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 1.3e-24 117.9 122 53.3
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 1.7e-24 117.5 106 56.6
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 1.7e-24 117.5 134 50.0
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 2.9e-24 116.7 134 53.7
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 2.9e-24 116.7 131 51.1
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 3.8e-24 116.3 134 51.5
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 3.8e-24 116.3 102 58.8
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 4.9e-24 115.9 134 50.0
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 6.5e-24 115.5 138 50.0
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 8.4e-24 115.2 111 56.8
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 8.4e-24 115.2 136 50.0
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 8.4e-24 115.2 157 43.3
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 1.1e-23 114.8 147 47.6
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 1.1e-23 114.8 105 57.1
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 1.1e-23 114.8 131 48.9
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 1.4e-23 114.4 134 53.0
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 1.4e-23 114.4 120 50.8
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 1.9e-23 114.0 108 54.6
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 1.9e-23 114.0 108 54.6
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 1.9e-23 114.0 108 54.6
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 1.9e-23 114.0 134 50.0
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 2.5e-23 113.6 116 54.3
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 3.2e-23 113.2 127 50.4
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 3.2e-23 113.2 102 58.8
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 3.2e-23 113.2 117 50.4
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 4.2e-23 112.8 114 50.0
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 7.1e-23 112.1 115 53.9
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 7.1e-23 112.1 139 47.5
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 9.3e-23 111.7 112 55.4
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 1.2e-22 111.3 102 57.8
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 1.2e-22 111.3 100 59.0
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 1.2e-22 111.3 140 48.6
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 2.1e-22 110.5 135 48.1
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 2.7e-22 110.2 103 56.3
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 3.5e-22 109.8 135 48.9
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 7.9e-22 108.6 100 52.0
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 7.9e-22 108.6 131 48.9
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 7.9e-22 108.6 110 52.7
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 1.0e-21 108.2 64 82.8
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 1.0e-21 108.2 137 48.2
MBI19_g05599_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 2.3e-21 107.1 63 85.7
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 3.0e-21 106.7 97 55.7
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 3.0e-21 106.7 126 48.4
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 6.7e-21 105.5 118 49.2
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 8.7e-21 105.1 109 48.6
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 8.7e-21 105.1 112 51.8
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 1.5e-20 104.4 112 51.8
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 1.9e-20 104.0 95 60.0
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 1.9e-20 104.0 102 56.9
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 2.5e-20 103.6 156 41.0
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 2.5e-20 103.6 133 45.9
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 2.5e-20 103.6 139 45.3
MBI04_g06289_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.3e-20 103.2 81 70.4
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 4.3e-20 102.8 127 48.0
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 5.7e-20 102.4 137 46.0
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 6.3e-19 99.0 99 53.5
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 8.2e-19 98.6 129 46.5
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 1.1e-18 98.2 101 51.5
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 1.4e-18 97.8 94 56.4
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 1.4e-18 97.8 98 51.0
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 1.4e-18 97.8 108 50.9
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 1.4e-18 97.8 107 48.6
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 3.1e-18 96.7 101 49.5
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 4.1e-18 96.3 83 63.9
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 5.3e-18 95.9 95 56.8
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 5.3e-18 95.9 95 52.6
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 6.9e-18 95.5 100 52.0
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 6.9e-18 95.5 137 43.8
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 9.0e-18 95.1 95 55.8
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 9.0e-18 95.1 95 55.8
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 9.0e-18 95.1 95 55.8
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 1.2e-17 94.7 96 52.1
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 1.2e-17 94.7 115 47.0
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 1.2e-17 94.7 90 55.6
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 3.4e-17 93.2 107 43.9
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 3.4e-17 93.2 90 55.6
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 4.5e-17 92.8 90 55.6
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 4.5e-17 92.8 90 55.6
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 4.5e-17 92.8 94 53.2
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 4.5e-17 92.8 90 55.6
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 4.5e-17 92.8 90 55.6
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 5.9e-17 92.4 90 54.4
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 5.9e-17 92.4 96 53.1
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 7.7e-17 92.0 94 53.2
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 7.7e-17 92.0 108 49.1
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 1.0e-16 91.7 90 54.4
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 1.0e-16 91.7 99 48.5
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 1.0e-16 91.7 143 39.9
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 1.3e-16 91.3 96 49.0
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 1.3e-16 91.3 136 41.9
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 1.7e-16 90.9 90 52.2
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 2.9e-16 90.1 94 52.1
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 2.9e-16 90.1 116 45.7
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 3.8e-16 89.7 113 46.0
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 1.1e-15 88.2 126 42.9
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 1.4e-15 87.8 94 50.0
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 1.4e-15 87.8 90 47.8
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 2.5e-15 87.0 103 48.5
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 3.2e-15 86.7 103 47.6
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.2e-15 86.7 103 47.6
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.2e-15 86.7 103 47.6
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 9.4e-15 85.1 103 46.6
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 9.4e-15 85.1 103 46.6
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 3.9e-13 79.7 73 54.8
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 4.8e-11 72.8 93 36.6
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 1.1e-10 71.6 122 37.7
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 1.4e-10 71.2 88 40.9
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 5.3e-10 69.3 117 34.2
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 6.9e-10 68.9 89 39.3
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 1.2e-09 68.2 88 40.9
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 1.7e-08 64.3 30 90.0
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 1.9e-07 60.8 105 39.0
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 2.7e-06 57.0 46 56.5
MBI05_g14358_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D244317 4.7e-06 56.2 27 74.1
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 4.7e-06 56.2 108 33.3


User provided reference genes

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