Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.0e-122 441.8 215 100.0
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 5.0e-101 371.3 221 84.2
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 8.6e-29 131.3 111 65.8
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 4.3e-20 102.4 108 56.5
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 2.1e-19 100.1 74 73.0
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 3.6e-19 99.4 106 53.8
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 3.6e-19 99.4 112 51.8
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 1.1e-18 97.8 101 55.4
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 1.4e-18 97.4 108 50.9
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 1.4e-18 97.4 141 44.0
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.8e-18 97.1 131 44.3
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.8e-18 97.1 120 48.3
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 3.1e-18 96.3 106 50.9
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 3.1e-18 96.3 103 51.5
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 4.0e-18 95.9 132 47.7
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 4.0e-18 95.9 134 44.8
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 6.9e-18 95.1 122 47.5
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 9.0e-18 94.7 130 46.2
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 1.2e-17 94.4 131 46.6
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 1.5e-17 94.0 102 52.9
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 1.5e-17 94.0 125 45.6
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 2.0e-17 93.6 114 49.1
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 2.0e-17 93.6 134 47.0
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 2.0e-17 93.6 135 45.9
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 2.0e-17 93.6 136 45.6
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 2.6e-17 93.2 134 47.0
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 2.6e-17 93.2 134 45.5
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 2.6e-17 93.2 120 46.7
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 3.4e-17 92.8 138 44.9
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 4.5e-17 92.4 126 46.8
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 4.5e-17 92.4 129 43.4
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 5.8e-17 92.0 135 45.9
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 5.8e-17 92.0 111 50.5
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 5.8e-17 92.0 127 46.5
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 5.8e-17 92.0 109 47.7
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 5.8e-17 92.0 117 43.6
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 5.8e-17 92.0 99 52.5
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 7.6e-17 91.7 108 48.1
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 7.6e-17 91.7 131 43.5
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 7.6e-17 91.7 134 45.5
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 1.3e-16 90.9 116 48.3
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 1.3e-16 90.9 114 44.7
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 1.3e-16 90.9 134 46.3
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 1.3e-16 90.9 68 70.6
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 1.7e-16 90.5 131 45.8
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 2.9e-16 89.7 115 45.2
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 2.9e-16 89.7 115 45.2
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 2.9e-16 89.7 115 45.2
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 2.9e-16 89.7 126 46.0
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 2.9e-16 89.7 124 46.0
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 2.9e-16 89.7 137 45.3
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 3.8e-16 89.4 140 44.3
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 6.4e-16 88.6 108 50.9
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 6.4e-16 88.6 100 52.0
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 6.4e-16 88.6 113 49.6
MBI19_g05599_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 6.4e-16 88.6 63 74.6
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 8.4e-16 88.2 118 46.6
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 1.1e-15 87.8 103 48.5
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 1.9e-15 87.0 110 47.3
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 2.4e-15 86.7 105 47.6
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 3.2e-15 86.3 100 46.0
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 3.2e-15 86.3 110 47.3
MBI04_g06289_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 4.2e-15 85.9 73 69.9
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 5.4e-15 85.5 109 43.1
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 7.1e-15 85.1 107 47.7
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 7.1e-15 85.1 137 42.3
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 9.3e-15 84.7 96 49.0
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 1.2e-14 84.3 107 47.7
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 2.7e-14 83.2 156 37.8
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 7.9e-14 81.6 101 45.5
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 1.3e-13 80.9 127 42.5
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 1.3e-13 80.9 133 40.6
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 3.0e-13 79.7 136 40.4
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 3.9e-13 79.3 111 42.3
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 5.1e-13 79.0 129 43.4
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 5.1e-13 79.0 101 45.5
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 6.7e-13 78.6 107 43.9
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 8.7e-13 78.2 101 42.6
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 1.5e-12 77.4 94 50.0
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 1.5e-12 77.4 114 43.0
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 1.5e-12 77.4 95 47.4
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 1.9e-12 77.0 100 47.0
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 1.9e-12 77.0 137 40.1
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 2.5e-12 76.6 96 52.1
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 2.5e-12 76.6 90 48.9
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 4.3e-12 75.9 95 50.5
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 5.6e-12 75.5 107 39.3
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 5.6e-12 75.5 96 51.0
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 5.6e-12 75.5 96 51.0
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 5.6e-12 75.5 96 51.0
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 5.6e-12 75.5 91 51.6
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 7.4e-12 75.1 83 56.6
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 7.4e-12 75.1 108 44.4
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 1.6e-11 73.9 107 46.7
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 2.1e-11 73.6 91 50.5
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 2.8e-11 73.2 91 50.5
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 2.8e-11 73.2 91 50.5
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 2.8e-11 73.2 91 50.5
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 2.8e-11 73.2 91 50.5
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 4.8e-11 72.4 96 43.8
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 4.8e-11 72.4 95 48.4
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 4.8e-11 72.4 96 44.8
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 4.8e-11 72.4 113 42.5
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 6.2e-11 72.0 91 49.5
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 8.1e-11 71.6 96 43.8
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 8.1e-11 71.6 96 43.8
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 8.1e-11 71.6 96 43.8
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 8.1e-11 71.6 89 46.1
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 8.1e-11 71.6 113 42.5
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 1.1e-10 71.2 91 47.3
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 1.1e-10 71.2 107 43.9
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 1.8e-10 70.5 95 47.4
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.8e-10 70.5 96 42.7
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 5.3e-10 68.9 116 38.8
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 9.0e-10 68.2 95 45.3
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 9.0e-10 68.2 143 35.0
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 1.5e-09 67.4 91 42.9
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 7.6e-09 65.1 126 38.1
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 1.3e-08 64.3 84 40.5
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 1.3e-08 64.3 30 90.0
MBI05_g14358_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D244317 3.5e-06 56.2 27 74.1


User provided reference genes

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