Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g14902_MAGBIO Magnolia biondii HOM05D000106 ORTHO05D031568 6.2e-24 113.2 55 100.0
CsaV3_6G038270 Cucumis sativus L. HOM05D000106 ORTHO05D003154 3.9e-10 67.4 48 64.6
ClCG06G005990 Citrullus lanatus HOM05D000106 ORTHO05D003154 6.7e-10 66.6 48 64.6
Lj6A597G84 Lonicera japonica HOM05D000106 ORTHO05D003154 6.7e-10 66.6 46 65.2
CANSAT78G1182 Cannabis sativa HOM05D000106 ORTHO05D003154 1.5e-09 65.5 42 73.8
GSVIVG01017926001 Vitis vinifera HOM05D000106 ORTHO05D003154 1.5e-09 65.5 42 73.8
AT3G05990 Arabidopsis thaliana HOM05D000106 ORTHO05D003154 1.9e-09 65.1 48 62.5
TWI53G2129 Tripterygium wilfordii HOM05D000106 ORTHO05D003154 1.9e-09 65.1 47 63.8
Atru.chr4.2514 Acer truncatum HOM05D000106 ORTHO05D003154 2.5e-09 64.7 42 73.8
MELO3C014492.2 Cucumis melo HOM05D000106 ORTHO05D003154 4.3e-09 63.9 42 66.7
Nn1g02241 Nelumbo nucifera HOM05D000106 ORTHO05D003154 4.3e-09 63.9 48 62.5
Migut.N00170 Erythranthe guttata HOM05D000106 ORTHO05D003154 5.7e-09 63.5 46 63.0
Gohir.A02G117200 Gossypium hirsutum HOM05D000106 ORTHO05D003154 5.7e-09 63.5 49 63.3
Gohir.A05G277766 Gossypium hirsutum HOM05D000106 ORTHO05D003154 5.7e-09 63.5 49 63.3
Gohir.D05G172900 Gossypium hirsutum HOM05D000106 ORTHO05D003154 5.7e-09 63.5 49 63.3
Actinidia23489 Actinidia chinensis HOM05D000106 ORTHO05D003154 7.4e-09 63.2 48 64.6
Actinidia40169 Actinidia chinensis HOM05D000106 ORTHO05D003154 7.4e-09 63.2 47 66.0
MSTRG.21843 Avicennia marina HOM05D000106 ORTHO05D003154 1.3e-08 62.4 41 70.7
AL3G16800 Arabidopsis lyrata HOM05D000106 ORTHO05D003154 2.2e-08 61.6 46 58.7
TWI09G0906 Tripterygium wilfordii HOM05D000106 ORTHO05D003154 4.8e-08 60.5 47 61.7
TAR628G0939 Trochodendron aralioides HOM05D000106 ORTHO05D003154 4.8e-08 60.5 45 55.6
Os05g0393100 Oryza sativa ssp. japonica HOM05D000106 ORTHO05D003154 6.3e-08 60.1 46 60.9
Cc02_g18750 Coffea canephora HOM05D000106 ORTHO05D003154 1.4e-07 58.9 46 56.5
FAN07G2668 Fragaria x ananassa HOM05D000106 ORTHO05D003154 2.4e-07 58.2 42 64.3
Gohir.D09G216700 Gossypium hirsutum HOM05D000106 ORTHO05D003154 2.4e-07 58.2 43 62.8
Nn1g02240 Nelumbo nucifera HOM05D000106 ORTHO05D003154 4.1e-07 57.4 48 58.3
MSTRG.24748 Avicennia marina HOM05D000106 ORTHO05D003154 5.3e-07 57.0 40 65.0
CiPaw.02G095200 Carya illinoinensis HOM05D000106 ORTHO05D003154 1.2e-06 55.8 40 65.0
Eucgr.H03552 Eucalyptus grandis HOM05D000106 ORTHO05D003154 2.0e-06 55.1 46 58.7
Nitab4.5_0001545g0010 Nicotiana tabacum HOM05D000106 ORTHO05D003154 2.0e-06 55.1 36 69.4
PGR004G1792 Punica granatum HOM05D000106 ORTHO05D003154 2.6e-06 54.7 42 61.9
Sed0001724 Sechium edule HOM05D000106 ORTHO05D003154 2.6e-06 54.7 47 57.4
Lj4g0007024 Lotus japonicus HOM05D000106 ORTHO05D003154 3.4e-06 54.3 46 50.0
EL10Ac9g21839 Beta vulgaris HOM05D000106 ORTHO05D003154 4.5e-06 53.9 46 47.8
MBI17_g31752_MAGBIO Magnolia biondii HOM05D000106 ORTHO05D003154 4.5e-06 53.9 28 85.7
arahy.Tifrunner.gnm1.ann1.0HPI60 Arachis hypogaea HOM05D000106 ORTHO05D031568 5.9e-06 53.5 47 57.4


User provided reference genes

Program Settings