Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g12588_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 7.0e-46 186.8 87 100.0
Nn6g34339 Nelumbo nucifera HOM05D005963 ORTHO05D006869 1.1e-17 93.2 68 67.6
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 2.4e-17 92.0 81 59.3
Cpa.g.sc4.183 Carica papaya HOM05D005963 ORTHO05D006869 3.1e-17 91.7 82 58.5
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 4.0e-17 91.3 67 67.2
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 4.0e-17 91.3 66 65.2
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 5.2e-17 90.9 81 58.0
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 5.2e-17 90.9 74 63.5
TWI14G0479 Tripterygium wilfordii HOM05D005963 ORTHO05D006869 6.8e-17 90.5 56 73.2
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 8.9e-17 90.1 65 64.6
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 8.9e-17 90.1 60 73.3
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 8.9e-17 90.1 74 60.8
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 8.9e-17 90.1 67 65.7
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 8.9e-17 90.1 61 70.5
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 8.9e-17 90.1 56 75.0
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 8.9e-17 90.1 66 66.7
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 8.9e-17 90.1 66 66.7
Psat1g106960 Pisum sativum HOM05D005963 ORTHO05D006869 8.9e-17 90.1 56 75.0
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 1.2e-16 89.7 74 62.2
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 1.2e-16 89.7 56 73.2
arahy.Tifrunner.gnm1.ann1.R4K09I Arachis hypogaea HOM05D005963 ORTHO05D006869 1.2e-16 89.7 56 73.2
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 1.2e-16 89.7 56 73.2
Gorai.001G047400 Gossypium raimondii HOM05D005963 ORTHO05D006869 1.2e-16 89.7 66 63.6
HanXRQChr14g0433491 Helianthus annuus HOM05D005963 ORTHO05D006869 1.2e-16 89.7 73 61.6
Medtr0007s0220 Medicago truncatula HOM05D005963 ORTHO05D006869 1.2e-16 89.7 56 73.2
QL12p038851 Quercus lobata HOM05D005963 ORTHO05D006869 1.2e-16 89.7 56 73.2
SHI13839 Sapria himalayana HOM05D005963 ORTHO05D006869 1.2e-16 89.7 56 73.2
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 1.2e-16 89.7 56 73.2
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 1.5e-16 89.4 55 74.5
Glyma.09G149700 Glycine max HOM05D005963 ORTHO05D006869 1.5e-16 89.4 56 73.2
HanXRQChr15g0486261 Helianthus annuus HOM05D005963 ORTHO05D006869 1.5e-16 89.4 60 71.7
Actinidia13537 Actinidia chinensis HOM05D005963 ORTHO05D006869 2.0e-16 89.0 60 70.0
EL10Ac3g05753 Beta vulgaris HOM05D005963 ORTHO05D006869 2.0e-16 89.0 61 68.9
Ca_05417_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 2.0e-16 89.0 56 73.2
Ca_30119_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 2.0e-16 89.0 56 73.2
MELO3C006856.2 Cucumis melo HOM05D005963 ORTHO05D006869 2.6e-16 88.6 65 64.6
CsaV3_3G016590 Cucumis sativus L. HOM05D005963 ORTHO05D006869 2.6e-16 88.6 65 64.6
FvH4_7g28640 Fragaria vesca HOM05D005963 ORTHO05D006869 2.6e-16 88.6 74 60.8
FAN01G2646 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.6e-16 88.6 74 60.8
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.6e-16 88.6 74 60.8
FAN03G0902 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.6e-16 88.6 74 60.8
FAN06G2356 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.6e-16 88.6 74 60.8
FAN06G4856 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.6e-16 88.6 74 60.8
FAN10G3242 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.4e-16 88.2 74 59.5
Lj8C34G2 Lonicera japonica HOM05D005963 ORTHO05D006869 3.4e-16 88.2 57 70.2
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 3.4e-16 88.2 56 73.2
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 3.4e-16 88.2 60 70.0
Atru.chr1.581 Acer truncatum HOM05D005963 ORTHO05D006869 4.4e-16 87.8 56 73.2
ClCG05G007670 Citrullus lanatus HOM05D005963 ORTHO05D006869 4.4e-16 87.8 65 63.1
Glyma.16G201100 Glycine max HOM05D005963 ORTHO05D006869 4.4e-16 87.8 56 71.4
Phvul.004G124000 Phaseolus vulgaris HOM05D005963 ORTHO05D006869 4.4e-16 87.8 56 71.4
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 4.4e-16 87.8 60 70.0
Sed0018627 Sechium edule HOM05D005963 ORTHO05D006869 4.4e-16 87.8 65 63.1
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 4.4e-16 87.8 60 71.7
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 4.4e-16 87.8 60 71.7
VMungo0464G1720 Vigna mungo HOM05D005963 ORTHO05D006869 4.4e-16 87.8 56 71.4
Ah.13g067680 Amaranthus hybridus HOM05D005963 ORTHO05D006869 5.8e-16 87.4 54 75.9
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 5.8e-16 87.4 66 65.2
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 5.8e-16 87.4 56 71.4
AUR62021279 Chenopodium quinoa HOM05D005963 ORTHO05D006869 7.6e-16 87.0 54 74.1
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 9.9e-16 86.7 67 65.7
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 1.3e-15 86.3 56 69.6
Haze_13797 Corylus avellana HOM05D005963 ORTHO05D006869 1.7e-15 85.9 54 70.4
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 1.7e-15 85.9 60 71.7
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 1.7e-15 85.9 60 70.0
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 1.7e-15 85.9 57 68.4
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 2.9e-15 85.1 60 71.7
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 2.9e-15 85.1 53 75.5
RcHm_v2.0_Chr1g0376121 Rosa chinensis HOM05D005963 ORTHO05D006869 2.9e-15 85.1 74 59.5
ATR0661G452 Amborella trichopoda HOM05D005963 ORTHO05D006869 3.8e-15 84.7 56 66.1
EL10Ac7g16401 Beta vulgaris HOM05D005963 ORTHO05D006869 3.8e-15 84.7 54 72.2
BcaC04g20635 Brassica carinata HOM05D005963 ORTHO05D006869 3.8e-15 84.7 56 73.2
A10p09630 Brassica napus HOM05D005963 ORTHO05D006869 3.8e-15 84.7 56 73.2
C09p41240 Brassica napus HOM05D005963 ORTHO05D006869 3.8e-15 84.7 56 73.2
BolC9t56999H Brassica oleracea HOM05D005963 ORTHO05D006869 3.8e-15 84.7 56 73.2
BraA10t43044Z Brassica rapa HOM05D005963 ORTHO05D006869 3.8e-15 84.7 56 73.2
Manes.06G140900 Manihot esculenta HOM05D005963 ORTHO05D006869 3.8e-15 84.7 75 57.3
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 3.8e-15 84.7 71 62.0
Potri.012G132300 Populus trichocarpa HOM05D005963 ORTHO05D006869 3.8e-15 84.7 78 56.4
Sp6g14050 Schrenkiella parvula HOM05D005963 ORTHO05D006869 4.9e-15 84.3 60 70.0
Sabra12G0099600 Salix brachista HOM05D005963 ORTHO05D006869 6.4e-15 84.0 54 72.2
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 6.4e-15 84.0 67 62.7
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 1.1e-14 83.2 68 64.7
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 1.4e-14 82.8 90 47.8
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 1.9e-14 82.4 52 71.2
TAR374G1343 Trochodendron aralioides HOM05D005963 ORTHO05D006869 1.9e-14 82.4 56 67.9
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 2.4e-14 82.0 60 70.0
AT5G51800 Arabidopsis thaliana HOM05D005963 ORTHO05D006869 2.4e-14 82.0 60 70.0
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 3.2e-14 81.6 60 68.3
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 3.2e-14 81.6 52 71.2
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 4.2e-14 81.3 52 69.2
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 4.2e-14 81.3 60 68.3
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 5.4e-14 80.9 60 68.3
PSO782G2761 Papaver somniferum HOM05D005963 ORTHO05D006869 5.4e-14 80.9 91 48.4
A02p12120 Brassica napus HOM05D005963 ORTHO05D006869 7.1e-14 80.5 60 66.7
BraA02t06276Z Brassica rapa HOM05D005963 ORTHO05D006869 7.1e-14 80.5 60 66.7
BcaC03g14575 Brassica carinata HOM05D005963 ORTHO05D006869 9.2e-14 80.1 60 66.7
C02p20220 Brassica napus HOM05D005963 ORTHO05D006869 9.2e-14 80.1 60 66.7
BolC2t08150H Brassica oleracea HOM05D005963 ORTHO05D006869 9.2e-14 80.1 60 66.7
AUR62016071 Chenopodium quinoa HOM05D005963 ORTHO05D006869 2.1e-13 79.0 55 67.3
DCAR_018136 Daucus carota HOM05D005963 ORTHO05D006869 8.1e-10 67.0 56 53.6
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 3.8e-07 58.2 86 37.2


User provided reference genes

Program Settings