Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2550.0 1273 100.0
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2228.4 1271 86.8
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2223.0 1271 86.5
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2220.3 1271 86.1
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2212.6 1272 85.6
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2207.9 1274 85.6
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2206.0 1272 85.6
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2204.9 1271 85.6
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2201.8 1273 85.6
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2195.6 1274 85.2
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2191.4 1272 85.1
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2187.1 1273 84.7
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2184.8 1275 84.6
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2183.3 1276 84.1
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2182.1 1276 84.2
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2177.9 1273 84.9
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2177.5 1272 84.0
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2176.7 1273 84.5
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2176.4 1272 84.6
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2174.8 1273 84.7
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2174.4 1273 84.7
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2170.6 1273 84.6
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2170.2 1276 83.7
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2170.2 1273 84.3
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2169.8 1273 84.1
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2169.0 1275 84.1
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2167.9 1275 84.2
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2166.7 1273 83.9
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2166.0 1276 82.9
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2164.4 1273 84.1
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2164.0 1273 84.2
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2162.1 1275 82.7
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2159.4 1276 83.2
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1272 84.1
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1273 84.1
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2158.3 1272 83.0
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2157.9 1275 83.1
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2155.9 1272 83.9
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2155.9 1275 83.6
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2155.6 1273 83.8
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2154.8 1275 82.5
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2154.4 1275 82.1
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2154.4 1275 83.3
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2154.0 1275 82.5
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2154.0 1273 83.1
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2153.6 1275 82.0
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2153.6 1275 82.0
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2153.3 1275 82.4
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2152.9 1273 83.0
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2152.5 1275 82.0
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2151.7 1277 83.1
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2150.9 1275 82.3
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2149.8 1265 84.2
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2149.0 1272 83.2
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2145.9 1277 83.2
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2145.5 1268 83.8
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2145.2 1272 82.9
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2144.4 1273 83.0
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2144.0 1275 82.8
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2144.0 1273 83.2
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2143.6 1273 82.4
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2141.7 1255 84.3
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2140.9 1272 82.6
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2139.4 1272 83.1
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2139.4 1276 82.3
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2138.2 1271 82.5
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2137.5 1278 82.0
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2128.2 1272 81.6
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2127.8 1277 82.1
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2127.4 1273 83.2
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2126.7 1272 82.3
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2126.7 1276 82.4
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2125.5 1267 82.6
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2123.2 1278 82.3
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2123.2 1275 81.2
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2122.8 1244 84.3
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2118.2 1269 81.9
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2117.0 1273 82.4
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2115.1 1273 82.0
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2113.6 1270 81.8
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2109.7 1277 81.5
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2102.8 1270 82.0
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2098.2 1213 85.8
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2095.5 1270 81.4
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2092.4 1271 80.9
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2091.6 1255 82.2
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2083.9 1277 81.9
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2073.1 1277 80.7
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2070.8 1269 81.0
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2067.7 1277 80.0
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2057.0 1272 80.2
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2045.4 1275 78.4
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2034.6 1164 87.0
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 1999.6 1273 78.2
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1983.4 1273 77.2
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1976.8 1271 76.7
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1924.8 1193 80.3
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1909.4 1279 73.5
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1887.8 1281 72.8
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1859.7 1247 74.5
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1841.2 1078 82.7
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1837.0 1269 71.7
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1796.2 1095 81.4
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1767.7 1136 77.7
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1757.7 1273 71.1
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1755.0 1275 70.5
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1627.8 972 81.6
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1573.9 1050 73.3
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1558.5 1327 60.9
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1362.4 820 82.0
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1351.3 1272 60.0
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1329.7 1334 53.6
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1317.4 1403 52.2
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1256.9 731 85.0
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1148.3 1048 60.4
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1124.0 808 71.8
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 4.0e-267 925.6 576 80.2
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.1e-261 907.5 502 90.4
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 6.1e-255 885.2 1249 40.6
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-221 774.6 660 61.1
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 1.2e-221 774.6 535 73.5
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.7e-204 716.5 462 80.5
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 9.2e-187 658.7 389 86.4
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 2.2e-135 488.0 359 70.2
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.7e-116 425.2 317 71.0
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 1.9e-107 395.2 270 75.6
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 4.9e-79 300.8 479 41.5
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 3.5e-69 268.1 169 75.1
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.9e-67 262.3 169 74.0
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 7.3e-67 260.4 169 73.4
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.8e-65 255.8 138 92.8
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 6.0e-61 240.7 245 54.7
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 8.1e-50 203.8 116 83.6
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-44 186.4 157 65.6
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.1e-41 175.3 91 91.2
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 4.9e-39 167.9 183 54.6
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 1.1e-30 140.2 99 62.6
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 4.6e-29 134.8 104 67.3


User provided reference genes

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