Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g08791_MAGBIO Magnolia biondii HOM05D001615 ORTHO05D001493 7.5e-80 300.4 149 100.0
TAR623G0726 Trochodendron aralioides HOM05D001615 ORTHO05D001493 3.2e-14 82.4 56 71.4
Nn3g18631 Nelumbo nucifera HOM05D001615 ORTHO05D001493 6.0e-13 78.2 56 67.9
Aqoxy1G00537 Aquilegia oxysepala HOM05D001615 ORTHO05D001493 5.1e-12 75.1 62 58.1
PSO384G3430 Papaver somniferum HOM05D001615 ORTHO05D001493 1.9e-11 73.2 62 62.9
PSO339G2024 Papaver somniferum HOM05D001615 ORTHO05D001493 2.5e-11 72.8 56 66.1
Dinv25061 Davidia involucrata HOM05D001615 ORTHO05D001493 1.3e-10 70.5 56 60.7
Actinidia03935 Actinidia chinensis HOM05D001615 ORTHO05D001493 2.8e-10 69.3 56 58.9
ClCG10G015780 Citrullus lanatus HOM05D001615 ORTHO05D001493 3.7e-10 68.9 64 51.6
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 3.7e-10 68.9 61 65.6
Manes.09G137800 Manihot esculenta HOM05D001615 ORTHO05D001493 3.7e-10 68.9 88 40.9
CiPaw.15G062100 Carya illinoinensis HOM05D001615 ORTHO05D001493 4.8e-10 68.6 53 62.3
Duzib177G1092 Durio zibethinus HOM05D001615 ORTHO05D001493 4.8e-10 68.6 52 59.6
Gohir.A13G097400 Gossypium hirsutum HOM05D001615 ORTHO05D001493 4.8e-10 68.6 44 65.9
Gohir.D13G101400 Gossypium hirsutum HOM05D001615 ORTHO05D001493 6.2e-10 68.2 44 65.9
Gorai.013G113500 Gossypium raimondii HOM05D001615 ORTHO05D001493 6.2e-10 68.2 44 65.9
TWI32G1083 Tripterygium wilfordii HOM05D001615 ORTHO05D001493 8.1e-10 67.8 53 60.4
Sabra19G0049700 Salix brachista HOM05D001615 ORTHO05D001493 1.1e-09 67.4 53 62.3
MSTRG.10430 Avicennia marina HOM05D001615 ORTHO05D001493 1.4e-09 67.0 55 58.2
Thecc.05G244200 Theobroma cacao HOM05D001615 ORTHO05D001493 1.4e-09 67.0 50 62.0
MELO3C009797.2 Cucumis melo HOM05D001615 ORTHO05D001493 1.8e-09 66.6 72 45.8
CsaV3_3G040660 Cucumis sativus L. HOM05D001615 ORTHO05D001493 1.8e-09 66.6 72 45.8
Rhsim03G0052200 Rhododendron simsii HOM05D001615 ORTHO05D001493 1.8e-09 66.6 56 60.7
HPP92_018639 Vanilla planifolia HOM05D001615 ORTHO05D001493 1.8e-09 66.6 55 58.2
SGA_v2.0_scaffold41G15802 Striga asiatica HOM05D001615 ORTHO05D001493 2.4e-09 66.2 53 62.3
vmacro07560 Vaccinium macrocarpon HOM05D001615 ORTHO05D001493 2.4e-09 66.2 56 58.9
QL07p017689 Quercus lobata HOM05D001615 ORTHO05D001493 3.1e-09 65.9 50 62.0
Lsat_1_v5_gn_1_56061 Lactuca sativa HOM05D001615 ORTHO05D001493 4.0e-09 65.5 54 51.9
Nitab4.5_0000811g0020 Nicotiana tabacum HOM05D001615 ORTHO05D001493 4.0e-09 65.5 54 59.3
Oeu063106.1 Olea europaea HOM05D001615 ORTHO05D001493 4.0e-09 65.5 50 66.0
Migut.L01869 Erythranthe guttata HOM05D001615 ORTHO05D001493 5.3e-09 65.1 60 55.0
Sabra15G0066800 Salix brachista HOM05D001615 ORTHO05D001493 5.3e-09 65.1 45 66.7
ATR0697G278 Amborella trichopoda HOM05D001615 ORTHO05D001493 6.9e-09 64.7 59 57.6
COL.COLO4_28618 Corchorus olitorius HOM05D001615 ORTHO05D001493 6.9e-09 64.7 50 60.0
Lj2g0021193 Lotus japonicus HOM05D001615 ORTHO05D001493 6.9e-09 64.7 64 48.4
AT3G03773 Arabidopsis thaliana HOM05D001615 ORTHO05D001493 9.0e-09 64.3 51 60.8
CANSAT78G1201 Cannabis sativa HOM05D001615 ORTHO05D001493 9.0e-09 64.3 53 58.5
Potri.013G062600 Populus trichocarpa HOM05D001615 ORTHO05D001493 9.0e-09 64.3 59 55.9
Sabra13G0055800 Salix brachista HOM05D001615 ORTHO05D001493 9.0e-09 64.3 59 55.9
Cc05_g02280 Coffea canephora HOM05D001615 ORTHO05D001493 1.2e-08 63.9 53 58.5
Lj1A1066G54 Lonicera japonica HOM05D001615 ORTHO05D001493 1.2e-08 63.9 50 56.0
AL3G13590 Arabidopsis lyrata HOM05D001615 ORTHO05D001493 1.5e-08 63.5 51 62.7
CARHR077840 Cardamine hirsuta HOM05D001615 ORTHO05D001493 1.5e-08 63.5 53 56.6
Eucgr.K01519 Eucalyptus grandis HOM05D001615 ORTHO05D001493 1.5e-08 63.5 53 54.7
Glyma.05G089900 Glycine max HOM05D001615 ORTHO05D001493 1.5e-08 63.5 53 58.5
Peaxi162Scf00575g00616 Petunia axillaris HOM05D001615 ORTHO05D001493 1.5e-08 63.5 51 60.8
Potri.019G038550 Populus trichocarpa HOM05D001615 ORTHO05D001493 2.0e-08 63.2 50 58.0
CAN.G128.131 Capsicum annuum HOM05D001615 ORTHO05D001493 3.4e-08 62.4 64 53.1
DCAR_020657 Daucus carota HOM05D001615 ORTHO05D001493 3.4e-08 62.4 55 50.9
Glyma.17G187500 Glycine max HOM05D001615 ORTHO05D001493 3.4e-08 62.4 53 56.6
MD12G1008700 Malus domestica HOM05D001615 ORTHO05D001493 3.4e-08 62.4 49 61.2
Prupe.7G010500 Prunus persica HOM05D001615 ORTHO05D001493 3.4e-08 62.4 49 61.2
Sed0003614 Sechium edule HOM05D001615 ORTHO05D001493 3.4e-08 62.4 64 46.9
TWI60G0189 Tripterygium wilfordii HOM05D001615 ORTHO05D001493 4.5e-08 62.0 44 61.4
Nitab4.5_0000613g0130 Nicotiana tabacum HOM05D001615 ORTHO05D001493 5.8e-08 61.6 41 65.9
Phvul.004G073200 Phaseolus vulgaris HOM05D001615 ORTHO05D001493 5.8e-08 61.6 52 53.8
BcaC09g47753 Brassica carinata HOM05D001615 ORTHO05D001493 7.6e-08 61.2 45 62.2
A01p41330 Brassica napus HOM05D001615 ORTHO05D001493 7.6e-08 61.2 45 62.2
BNapus_Darmor_BZH_scaffold_78p00380 Brassica napus HOM05D001615 ORTHO05D001493 7.6e-08 61.2 45 62.2
BolC1t05807H Brassica oleracea HOM05D001615 ORTHO05D001493 7.6e-08 61.2 45 62.2
BraA01t04557Z Brassica rapa HOM05D001615 ORTHO05D001493 7.6e-08 61.2 45 62.2
Carub.0003s0294 Capsella rubella HOM05D001615 ORTHO05D001493 7.6e-08 61.2 83 43.4
CDE10G1315 Ceratophyllum demersum HOM05D001400 ORTHO05D001493 7.6e-08 61.2 61 47.5
Medtr6g027770 Medicago truncatula HOM05D001615 ORTHO05D001493 7.6e-08 61.2 52 55.8
Sp3g02750 Schrenkiella parvula HOM05D001615 ORTHO05D001493 7.6e-08 61.2 53 52.8
unitig_899.g15192 Utricularia gibba HOM05D001615 ORTHO05D001493 7.6e-08 61.2 50 58.0
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 9.9e-08 60.8 52 57.7
Ciclev10022696m.g Citrus clementina HOM05D001615 ORTHO05D001493 9.9e-08 60.8 41 63.4
Ciclev10024175m.g Citrus clementina HOM05D001615 ORTHO05D001493 9.9e-08 60.8 41 63.4
VMungo0464G0549 Vigna mungo HOM05D001615 ORTHO05D001493 9.9e-08 60.8 52 53.8
Lalb_Chr14g0364711 Lupinus albus HOM05D001615 ORTHO05D001493 1.3e-07 60.5 44 56.8
Psat1g090320 Pisum sativum HOM05D001615 ORTHO05D001493 1.3e-07 60.5 52 55.8
Aa31LG5G14320 Aethionema arabicum HOM05D001615 ORTHO05D001493 1.7e-07 60.1 50 56.0
Haze_20446 Corylus avellana HOM05D001615 ORTHO05D001493 1.7e-07 60.1 50 56.0
PGR142G3288 Punica granatum HOM05D001615 ORTHO05D001493 1.7e-07 60.1 58 50.0
EL10Ac5g11741 Beta vulgaris HOM05D001615 ORTHO05D001493 2.2e-07 59.7 59 52.5
THA.LOC104802878 Tarenaya hassleriana HOM05D001615 ORTHO05D001493 2.2e-07 59.7 49 57.1
Atru.chr2.1474 Acer truncatum HOM05D001615 ORTHO05D001493 4.9e-07 58.5 51 52.9
AUR62030685 Chenopodium quinoa HOM05D001615 ORTHO05D001493 6.4e-07 58.2 53 54.7
Ca_25686_v3 Cicer arietinum L. HOM05D001615 ORTHO05D001493 6.4e-07 58.2 51 54.9
FvH4_1g28480 Fragaria vesca HOM05D001615 ORTHO05D001493 6.4e-07 58.2 57 49.1
FAN19G2948 Fragaria x ananassa HOM05D001615 ORTHO05D001493 6.4e-07 58.2 57 49.1
FAN26G3017 Fragaria x ananassa HOM05D001615 ORTHO05D001493 6.4e-07 58.2 57 49.1
HanXRQChr01g0026441 Helianthus annuus HOM05D001615 ORTHO05D001493 6.4e-07 58.2 57 45.6
Solyc10g081360.2 Solanum lycopersicum HOM05D001615 ORTHO05D001493 6.4e-07 58.2 55 54.5
Sopen10g031860 Solanum pennellii HOM05D001615 ORTHO05D001493 6.4e-07 58.2 55 54.5
PGSC0003DMG400028210 Solanum tuberosum HOM05D001615 ORTHO05D001493 6.4e-07 58.2 55 54.5
Thhalv10021254m.g Eutrema salsugineum HOM05D001615 ORTHO05D001493 8.4e-07 57.8 105 38.1
FAN23G0391 Fragaria x ananassa HOM05D001615 ORTHO05D001493 8.4e-07 57.8 43 60.5
RcHm_v2.0_Chr3g0496351 Rosa chinensis HOM05D001615 ORTHO05D001493 8.4e-07 57.8 43 58.1
ECA248G2792 Erigeron canadensis HOM05D001615 ORTHO05D001493 1.1e-06 57.4 54 48.1
TPR.G29880 Trifolium pratense HOM05D001615 ORTHO05D001493 3.2e-06 55.8 58 50.0
AUR62041187 Chenopodium quinoa HOM05D001615 ORTHO05D001493 4.2e-06 55.5 44 56.8
SEGI_32768 Sequoiadendron giganteum HOM05D001615 ORTHO05D001493 4.2e-06 55.5 60 43.3
arahy.Tifrunner.gnm1.ann1.F7DIGK Arachis hypogaea HOM05D001615 ORTHO05D001493 5.5e-06 55.1 46 54.3
arahy.Tifrunner.gnm1.ann1.FE2TXN Arachis hypogaea HOM05D001615 ORTHO05D001493 5.5e-06 55.1 46 54.3
arahy.Tifrunner.gnm1.ann1.ZMEP2D Arachis hypogaea HOM05D001615 ORTHO05D001493 5.5e-06 55.1 46 54.3


User provided reference genes

Program Settings