Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 4.2e-92 341.3 165 100.0
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 4.2e-76 288.1 144 95.1
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 4.1e-55 218.4 147 70.1
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 8.9e-50 200.7 144 66.7
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 1.5e-49 199.9 144 67.4
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 8.3e-48 194.1 144 63.9
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 8.3e-48 194.1 144 63.9
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 8.3e-48 194.1 128 71.1
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 2.4e-47 192.6 143 62.2
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 3.2e-47 192.2 144 63.9
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 2.1e-46 189.5 141 63.8
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 2.7e-46 189.1 138 65.9
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 3.5e-46 188.7 144 59.0
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 4.6e-46 188.3 144 59.7
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 6.0e-46 188.0 144 63.2
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 6.0e-46 188.0 133 67.7
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 6.0e-46 188.0 130 66.9
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 7.8e-46 187.6 134 67.2
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 1.3e-45 186.8 144 59.7
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 1.7e-45 186.4 148 60.8
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 8.6e-45 184.1 130 65.4
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 8.6e-45 184.1 144 59.0
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 5.6e-44 181.4 133 61.7
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 7.3e-44 181.0 144 60.4
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 9.5e-44 180.6 132 62.9
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 9.5e-44 180.6 143 62.2
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 9.5e-44 180.6 144 59.0
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 9.5e-44 180.6 141 60.3
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 1.2e-43 180.3 141 61.0
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 1.6e-43 179.9 144 60.4
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 3.6e-43 178.7 131 63.4
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 8.1e-43 177.6 146 58.2
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 1.1e-42 177.2 147 55.8
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 1.4e-42 176.8 134 63.4
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.8e-42 176.4 139 57.6
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.8e-42 176.4 139 57.6
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 2.3e-42 176.0 145 56.6
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 2.3e-42 176.0 144 57.6
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 3.1e-42 175.6 134 61.2
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 3.1e-42 175.6 147 56.5
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 3.1e-42 175.6 144 59.0
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 4.0e-42 175.3 133 60.2
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 5.2e-42 174.9 145 57.9
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 6.8e-42 174.5 144 59.0
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 6.8e-42 174.5 145 60.0
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 6.8e-42 174.5 130 65.4
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 6.8e-42 174.5 144 55.6
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 8.9e-42 174.1 135 57.8
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 1.2e-41 173.7 132 59.8
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 1.5e-41 173.3 132 62.9
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 1.5e-41 173.3 145 58.6
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 1.5e-41 173.3 144 56.9
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 2.6e-41 172.6 132 57.6
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 4.4e-41 171.8 146 58.2
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 5.8e-41 171.4 145 56.6
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 5.8e-41 171.4 128 60.2
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 9.9e-41 170.6 128 62.5
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 1.3e-40 170.2 145 55.9
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 1.3e-40 170.2 130 57.7
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 1.3e-40 170.2 128 62.5
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 1.7e-40 169.9 145 55.9
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 1.7e-40 169.9 144 56.2
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 1.7e-40 169.9 140 57.9
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 1.7e-40 169.9 156 53.2
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.7e-40 169.9 128 60.9
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.7e-40 169.9 128 60.9
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 1.7e-40 169.9 144 54.2
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.9e-40 169.1 131 61.1
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 3.8e-40 168.7 127 61.4
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 3.8e-40 168.7 144 54.9
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 4.9e-40 168.3 141 56.0
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 4.9e-40 168.3 142 55.6
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 6.4e-40 167.9 144 55.6
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 6.4e-40 167.9 132 58.3
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 1.4e-39 166.8 143 55.2
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 1.9e-39 166.4 130 57.7
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 2.4e-39 166.0 128 60.9
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 4.1e-39 165.2 132 56.1
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 7.1e-39 164.5 135 57.8
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 7.1e-39 164.5 128 58.6
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 9.2e-39 164.1 145 51.7
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 1.2e-38 163.7 128 58.6
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 1.6e-38 163.3 128 60.9
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 2.1e-38 162.9 129 61.2
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.1e-38 162.9 131 58.8
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 3.5e-38 162.2 131 57.3
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 3.5e-38 162.2 136 55.9
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 3.5e-38 162.2 135 56.3
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 6.0e-38 161.4 138 55.1
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 7.8e-38 161.0 132 56.8
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 7.8e-38 161.0 130 58.5
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.0e-37 160.6 139 56.1
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.0e-37 160.6 139 56.1
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 1.3e-37 160.2 130 55.4
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 2.3e-37 159.5 132 56.8
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 3.9e-37 158.7 130 56.2
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 3.9e-37 158.7 143 54.5
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 5.1e-37 158.3 133 57.9
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 5.1e-37 158.3 144 52.8
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 5.1e-37 158.3 129 58.9
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 1.1e-36 157.1 128 57.8
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 1.1e-36 157.1 144 52.8
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 1.9e-36 156.4 132 56.1
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 2.5e-36 156.0 128 59.4
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 1.2e-35 153.7 140 51.4
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 2.8e-35 152.5 144 52.1
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 3.6e-35 152.1 132 52.3
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 1.8e-34 149.8 132 54.5
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 1.8e-34 149.8 144 49.3
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 2.4e-34 149.4 144 49.3
Lj2g0002110 Lotus japonicus HOM05D000901 ORTHO05D004766 2.4e-34 149.4 156 50.0
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 2.4e-34 149.4 142 51.4
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 3.1e-34 149.1 136 52.9
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 4.0e-34 148.7 137 52.6
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 6.9e-34 147.9 143 50.3
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 8.9e-34 147.5 137 51.8
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 8.9e-34 147.5 130 54.6
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 8.9e-34 147.5 131 55.0
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 2.0e-33 146.4 135 56.3
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 2.6e-33 146.0 143 50.3
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 7.6e-33 144.4 144 49.3
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 1.7e-32 143.3 143 47.6
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 2.2e-32 142.9 143 47.6
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 2.9e-32 142.5 144 50.0
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 3.8e-32 142.1 143 49.0
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 4.9e-32 141.7 143 47.6
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 6.4e-32 141.4 143 49.0
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 8.4e-32 141.0 143 46.9
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 8.4e-32 141.0 143 46.9
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 8.4e-32 141.0 111 56.8
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 2.4e-31 139.4 134 49.3
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 7.1e-31 137.9 132 51.5
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 3.5e-30 135.6 128 49.2
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 6.0e-30 134.8 128 49.2
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 1.0e-29 134.0 132 50.0
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 1.3e-29 133.7 132 50.0
SMO137G0357 Selaginella moellendorffii HOM05D000901 ORTHO05D004766 6.6e-29 131.3 138 47.8
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 8.7e-29 131.0 152 43.4
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 8.7e-29 131.0 128 49.2
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 1.1e-28 130.6 132 48.5
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 1.1e-28 130.6 132 48.5
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 2.5e-28 129.4 126 50.0
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 7.3e-28 127.9 141 46.8
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 9.0e-26 120.9 131 47.3
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 1.2e-25 120.6 150 43.3
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 1.7e-24 116.7 151 41.7
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 2.2e-24 116.3 112 49.1
Pp3c23_11410 Physcomitrium patens HOM05D000901 ORTHO05D004766 3.5e-22 109.0 132 41.7
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 6.0e-22 108.2 88 59.1
Rhsim06G0013400 Rhododendron simsii HOM05D000901 ORTHO05D004766 2.3e-21 106.3 88 59.1
Mapoly0103s0033 Marchantia polymorpha HOM05D000901 ORTHO05D004766 6.7e-21 104.8 129 45.7
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 1.5e-20 103.6 111 45.0
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 4.3e-20 102.1 111 44.1
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 2.1e-19 99.8 107 44.9
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 6.2e-19 98.2 88 52.3
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 2.0e-17 93.2 102 44.1
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 2.0e-17 93.2 135 38.5
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 2.4e-15 86.3 88 48.9
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 4.6e-14 82.0 82 46.3
CBR_g10910 Chara braunii HOM05D000901 ORTHO05D004766 4.6e-14 82.0 129 32.6
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 1.5e-12 77.0 86 41.9
MBI05_g19938_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 5.6e-12 75.1 34 100.0
MBI05_g47803_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 5.6e-12 75.1 34 100.0
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 8.1e-11 71.2 76 43.4
Zm00001eb419520 Zea mays HOM05D000901 ORTHO05D004766 2.4e-10 69.7 51 60.8
AagrBONN_evm.TU.Sc2ySwM_228.1931 Anthoceros agrestis HOM05D000901 ORTHO05D004766 1.2e-09 67.4 88 39.8
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 5.8e-09 65.1 55 56.4
BcaC09g50962 Brassica carinata HOM05D000901 ORTHO05D004766 7.6e-09 64.7 56 51.8
Haze_22689 Corylus avellana HOM05D000901 ORTHO05D004766 3.2e-07 59.3 34 79.4
Oeu048720.1 Olea europaea HOM05D000901 ORTHO05D004766 5.5e-07 58.5 34 76.5


User provided reference genes

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