Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.1e-211 739.6 356 100.0
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 6.6e-143 511.1 356 72.5
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 6.7e-135 484.6 328 71.6
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 4.8e-133 478.4 356 65.2
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 1.7e-130 469.9 352 66.8
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 4.2e-129 465.3 351 65.2
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 1.2e-128 463.8 354 65.0
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 3.5e-128 462.2 352 65.6
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 6.0e-128 461.5 355 63.4
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 6.0e-128 461.5 355 63.4
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 5.1e-127 458.4 355 63.7
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 6.2e-125 451.4 355 62.0
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 5.3e-124 448.4 351 63.8
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 5.0e-122 441.8 359 62.1
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 6.5e-122 441.4 355 61.1
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 1.1e-121 440.7 355 60.8
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 2.5e-121 439.5 355 60.8
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 1.6e-120 436.8 374 58.0
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 1.8e-119 433.3 361 60.4
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 3.9e-119 432.2 355 60.8
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 1.9e-118 429.9 357 60.5
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.9e-118 429.9 358 59.8
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.3e-118 429.1 358 59.2
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 4.3e-118 428.7 354 59.9
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 4.3e-118 428.7 358 58.7
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.3e-117 427.2 358 58.4
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 2.8e-117 426.0 355 59.7
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 3.7e-117 425.6 356 60.7
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 1.4e-116 423.7 358 56.1
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 1.4e-116 423.7 355 59.2
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 2.4e-116 422.9 359 59.3
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 3.1e-116 422.5 357 58.8
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 4.1e-116 422.2 357 58.8
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 9.0e-116 421.0 346 61.0
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 9.0e-116 421.0 358 58.1
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 1.5e-115 420.2 355 58.9
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 3.4e-115 419.1 357 58.5
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 1.0e-114 417.5 358 59.5
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.3e-114 417.2 357 58.8
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.7e-114 416.8 355 57.2
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 2.9e-114 416.0 361 58.4
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 3.8e-114 415.6 351 60.1
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 8.5e-114 414.5 359 56.8
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 1.1e-113 414.1 366 56.8
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.4e-113 413.7 348 60.1
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 3.2e-113 412.5 350 56.3
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 9.4e-113 411.0 355 57.7
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 6.1e-112 408.3 360 56.7
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 7.9e-112 407.9 358 55.6
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 1.4e-111 407.1 340 61.5
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.8e-111 406.8 360 56.1
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.3e-111 406.4 360 56.1
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 3.9e-111 405.6 340 61.2
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 3.9e-111 405.6 356 57.6
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 5.1e-111 405.2 360 58.6
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 6.7e-111 404.8 358 56.1
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 8.8e-111 404.4 396 53.3
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 1.1e-110 404.1 359 56.5
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 1.1e-110 404.1 358 57.5
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 3.3e-110 402.5 358 56.1
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 5.7e-110 401.7 358 56.1
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 2.2e-109 399.8 358 57.3
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 2.4e-108 396.4 354 58.2
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 3.1e-108 396.0 344 57.3
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 6.9e-108 394.8 355 54.1
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 9.1e-108 394.4 359 54.6
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 3.4e-107 392.5 353 56.1
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 5.9e-107 391.7 357 55.7
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 5.9e-107 391.7 356 55.6
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 5.9e-107 391.7 392 51.5
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 7.7e-107 391.3 360 53.9
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 1.0e-106 391.0 357 55.7
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 1.3e-106 390.6 343 56.6
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.7e-106 390.2 357 55.7
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 2.9e-106 389.4 361 53.2
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 1.1e-105 387.5 357 54.3
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 1.2e-104 384.0 357 54.9
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.6e-104 383.6 359 53.8
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 1.0e-103 380.9 343 57.4
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.8e-103 380.2 356 54.2
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 3.0e-103 379.4 358 54.7
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 3.0e-103 379.4 358 54.7
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 3.9e-103 379.0 360 53.6
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 5.1e-103 378.6 350 56.0
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 1.5e-102 377.1 328 56.4
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 3.3e-102 375.9 347 55.6
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 3.3e-102 375.9 331 57.7
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 1.7e-101 373.6 302 61.6
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 8.2e-101 371.3 345 53.0
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 9.1e-100 367.9 332 55.7
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 4.5e-99 365.5 326 58.6
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 2.2e-98 363.2 348 55.7
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 3.8e-98 362.5 343 53.1
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 3.8e-98 362.5 258 67.8
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 1.2e-96 357.5 255 65.9
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 3.0e-95 352.8 355 52.1
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 5.7e-94 348.6 304 59.2
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.4e-92 344.0 356 50.6
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 3.1e-92 342.8 357 49.9
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 2.7e-91 339.7 356 50.3
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 3.2e-89 332.8 257 61.1
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 7.7e-83 311.6 385 47.0
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.9e-82 309.7 342 49.7
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 5.5e-81 305.4 252 57.5
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 8.8e-79 298.1 257 58.8
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 4.4e-78 295.8 311 48.9
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 1.6e-75 287.3 238 61.3
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 4.7e-72 275.8 368 40.5
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 3.9e-66 256.1 355 40.8
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 6.6e-66 255.4 352 40.6
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 1.1e-65 254.6 347 39.5
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 5.6e-65 252.3 198 63.1
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 5.8e-62 242.3 193 61.7
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 1.6e-59 234.2 196 58.2
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.5e-54 217.6 373 33.8
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 7.3e-49 198.7 148 63.5
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 4.9e-45 186.0 148 58.1
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.7e-42 177.6 162 54.9
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 5.4e-28 129.4 108 55.6
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 9.3e-28 128.6 120 53.3
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.3e-26 124.0 189 40.7
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 1.2e-11 75.1 79 51.9
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 1.6e-11 74.7 93 49.5


User provided reference genes

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