Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g05607_MAGBIO Magnolia biondii HOM05D000979 ORTHO05D035937 4.7e-35 150.6 73 100.0
MBI08_g18169_MAGBIO Magnolia biondii HOM05D000979 ORTHO05D035937 1.1e-20 102.8 49 98.0
Dinv44615 Davidia involucrata HOM05D000979 ORTHO05D003182 4.0e-18 94.4 50 88.0
Nitab4.5_0001497g0110 Nicotiana tabacum HOM05D000979 ORTHO05D003182 4.0e-18 94.4 50 88.0
Nitab4.5_0012986g0010 Nicotiana tabacum HOM05D000979 ORTHO05D003182 4.0e-18 94.4 50 88.0
Peaxi162Scf00578g00527 Petunia axillaris HOM05D000979 ORTHO05D003182 4.0e-18 94.4 50 88.0
unitig_32.g11717 Utricularia gibba HOM05D000979 ORTHO05D003182 4.0e-18 94.4 50 88.0
Nn3g19504 Nelumbo nucifera HOM05D000979 ORTHO05D003182 1.2e-17 92.8 50 88.0
Os01g0773600 Oryza sativa ssp. japonica HOM05D000979 ORTHO05D003182 1.2e-17 92.8 50 86.0
Zm00001eb370020 Zea mays HOM05D000979 ORTHO05D003182 1.2e-17 92.8 50 86.0
Cc03_g04650 Coffea canephora HOM05D000979 ORTHO05D003182 1.5e-17 92.4 50 84.0
ECA233G2003 Erigeron canadensis HOM05D000979 ORTHO05D003182 1.5e-17 92.4 50 84.0
HanXRQChr15g0468671 Helianthus annuus HOM05D000979 ORTHO05D003182 1.5e-17 92.4 50 84.0
HPP92_018438 Vanilla planifolia HOM05D000979 ORTHO05D003182 1.5e-17 92.4 50 86.0
Oeu024599.3 Olea europaea HOM05D000979 ORTHO05D003182 2.0e-17 92.0 50 84.0
TAR362G1217 Trochodendron aralioides HOM05D000979 ORTHO05D003182 2.0e-17 92.0 50 86.0
CAN.G950.14 Capsicum annuum HOM05D000979 ORTHO05D003182 2.6e-17 91.7 50 86.0
Lj6C654G8 Lonicera japonica HOM05D000979 ORTHO05D003182 2.6e-17 91.7 50 86.0
TPR.G15032 Trifolium pratense HOM05D000979 ORTHO05D003182 2.6e-17 91.7 50 84.0
arahy.Tifrunner.gnm1.ann1.ECXW3T Arachis hypogaea HOM05D000979 ORTHO05D003182 3.4e-17 91.3 50 84.0
arahy.Tifrunner.gnm1.ann1.F4SDAN Arachis hypogaea HOM05D000979 ORTHO05D003182 3.4e-17 91.3 50 84.0
Glyma.10G179900 Glycine max HOM05D000979 ORTHO05D003182 3.4e-17 91.3 50 84.0
Lalb_Chr02g0150021 Lupinus albus HOM05D000979 ORTHO05D003182 3.4e-17 91.3 50 84.0
Phvul.003G138408 Phaseolus vulgaris HOM05D000979 ORTHO05D003182 3.4e-17 91.3 50 84.0
Psat6g114880 Pisum sativum HOM05D000979 ORTHO05D003182 3.4e-17 91.3 50 84.0
VMungo0720G0367 Vigna mungo HOM05D000979 ORTHO05D003182 3.4e-17 91.3 50 84.0
Ca_09876_v3 Cicer arietinum L. HOM05D000979 ORTHO05D003182 4.4e-17 90.9 50 82.0
PSO238G0016 Papaver somniferum HOM05D000979 ORTHO05D003182 4.4e-17 90.9 50 82.0
Solyc06g053860.3 Solanum lycopersicum HOM05D000979 ORTHO05D003182 4.4e-17 90.9 50 86.0
Sopen06g018990 Solanum pennellii HOM05D000979 ORTHO05D003182 4.4e-17 90.9 50 86.0
DCAR_024201 Daucus carota HOM05D000979 ORTHO05D003182 5.7e-17 90.5 50 84.0
CANSAT78G0759 Cannabis sativa HOM05D000979 ORTHO05D003182 7.5e-17 90.1 50 84.0
Gohir.D09G224300 Gossypium hirsutum HOM05D000979 ORTHO05D003182 7.5e-17 90.1 50 84.0
Gorai.006G245800 Gossypium raimondii HOM05D000979 ORTHO05D003182 7.5e-17 90.1 50 84.0
Lj5g0023126 Lotus japonicus HOM05D000979 ORTHO05D003182 7.5e-17 90.1 50 82.0
ClCG05G004680 Citrullus lanatus HOM05D000979 ORTHO05D003182 9.8e-17 89.7 50 84.0
COL.COLO4_15768 Corchorus olitorius HOM05D000979 ORTHO05D003182 9.8e-17 89.7 50 84.0
Medtr1g076280 Medicago truncatula HOM05D000979 ORTHO05D003182 9.8e-17 89.7 50 82.0
Potri.008G160900 Populus trichocarpa HOM05D000979 ORTHO05D003182 9.8e-17 89.7 50 84.0
Prupe.1G027300 Prunus persica HOM05D000979 ORTHO05D003182 9.8e-17 89.7 50 84.0
QL06p015131 Quercus lobata HOM05D000979 ORTHO05D003182 9.8e-17 89.7 50 84.0
Sabra08G0122800 Salix brachista HOM05D000979 ORTHO05D003182 9.8e-17 89.7 50 84.0
Sc25g0004150 Simmondsia chinensis HOM05D000979 ORTHO05D003182 9.8e-17 89.7 50 84.0
TWI73G0711 Tripterygium wilfordii HOM05D000979 ORTHO05D003182 9.8e-17 89.7 50 84.0
Cpa.g.sc58.25 Carica papaya HOM05D000979 ORTHO05D003182 1.3e-16 89.4 50 84.0
PSO210G7663 Papaver somniferum HOM05D000979 ORTHO05D003182 1.3e-16 89.4 50 80.0
SGA_v2.0_scaffold88G27333 Striga asiatica HOM05D000979 ORTHO05D003182 1.3e-16 89.4 50 86.0
Migut.G00418 Erythranthe guttata HOM05D000979 ORTHO05D003182 1.7e-16 89.0 50 84.0
Manes.03G169900 Manihot esculenta HOM05D000979 ORTHO05D003182 1.7e-16 89.0 50 82.0
Sed0018032 Sechium edule HOM05D004913 ORTHO05D003182 1.7e-16 89.0 50 82.0
ATR0665G580 Amborella trichopoda HOM05D000979 ORTHO05D003182 2.2e-16 88.6 50 80.0
CSS0009777 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D003182 2.2e-16 88.6 50 84.0
Thecc.04G244100 Theobroma cacao HOM05D000979 ORTHO05D003182 2.2e-16 88.6 50 82.0
CDE04G1261 Ceratophyllum demersum HOM05D000979 ORTHO05D003182 2.8e-16 88.2 50 84.0
CDE07G0897 Ceratophyllum demersum HOM05D000979 ORTHO05D003182 2.8e-16 88.2 50 84.0
Cfa008397 Carpinus fangiana HOM05D000979 ORTHO05D003182 3.7e-16 87.8 50 82.0
Eucgr.H00217 Eucalyptus grandis HOM05D000979 ORTHO05D003182 3.7e-16 87.8 50 82.0
MD16G1206300 Malus domestica HOM05D000979 ORTHO05D003182 3.7e-16 87.8 50 82.0
SalBow2G2992 Salvia bowleyana HOM05D000979 ORTHO05D003182 3.7e-16 87.8 50 82.0
Atru.chr4.2281 Acer truncatum HOM05D000979 ORTHO05D003182 4.9e-16 87.4 50 80.0
MSTRG.4090 Avicennia marina HOM05D000979 ORTHO05D003182 4.9e-16 87.4 50 82.0
Rhsim04G0194400 Rhododendron simsii HOM05D000979 ORTHO05D003182 4.9e-16 87.4 53 79.2
GSVIVG01018097001 Vitis vinifera HOM05D000979 ORTHO05D003182 6.3e-16 87.0 50 82.0
Actinidia04491 Actinidia chinensis HOM05D000979 ORTHO05D003182 8.3e-16 86.7 50 82.0
Aqoxy2G03535 Aquilegia oxysepala HOM05D000979 ORTHO05D003182 8.3e-16 86.7 50 82.0
CiPaw.02G117700 Carya illinoinensis HOM05D000979 ORTHO05D003182 8.3e-16 86.7 50 80.0
MELO3C006478.2 Cucumis melo HOM05D000979 ORTHO05D003182 8.3e-16 86.7 50 80.0
CsaV3_3G012670 Cucumis sativus L. HOM05D000979 ORTHO05D003182 8.3e-16 86.7 50 80.0
Gohir.A09G222200 Gossypium hirsutum HOM05D000979 ORTHO05D003182 8.3e-16 86.7 50 82.0
SGA_v2.0_scaffold101G29783 Striga asiatica HOM05D000979 ORTHO05D003182 1.1e-15 86.3 50 80.0
FvH4_4g02250 Fragaria vesca HOM05D000979 ORTHO05D003182 1.8e-15 85.5 50 80.0
FAN12G0043 Fragaria x ananassa HOM05D000979 ORTHO05D003182 1.8e-15 85.5 50 80.0
FAN17G2213 Fragaria x ananassa HOM05D000979 ORTHO05D003182 1.8e-15 85.5 50 80.0
FAN22G1971 Fragaria x ananassa HOM05D000979 ORTHO05D003182 1.8e-15 85.5 50 80.0
PGR142G3247 Punica granatum HOM05D000979 ORTHO05D003182 1.8e-15 85.5 50 78.0
vmacro08401 Vaccinium macrocarpon HOM05D000979 ORTHO05D003182 2.4e-15 85.1 50 82.0
AUR62032026 Chenopodium quinoa HOM05D000979 ORTHO05D003182 4.1e-15 84.3 50 78.0
Ciclev10004553m.g Citrus clementina HOM05D000979 ORTHO05D003182 4.1e-15 84.3 50 78.0
Aa31LG5G3530 Aethionema arabicum HOM05D000979 ORTHO05D003182 5.4e-15 84.0 50 76.0
CARHR179910 Cardamine hirsuta HOM05D000979 ORTHO05D003182 7.0e-15 83.6 50 76.0
Hund19227 Selenicereus undatus HOM05D000979 ORTHO05D003182 7.0e-15 83.6 50 80.0
AUR62032723 Chenopodium quinoa HOM05D000979 ORTHO05D003182 1.2e-14 82.8 50 76.0
AL8G16610 Arabidopsis lyrata HOM05D000979 ORTHO05D003182 1.6e-14 82.4 50 74.0
AT5G43710 Arabidopsis thaliana HOM05D000979 ORTHO05D003182 1.6e-14 82.4 50 74.0
BcaB07g30563 Brassica carinata HOM05D000979 ORTHO05D003182 1.6e-14 82.4 50 74.0
Carub.0008s0492 Capsella rubella HOM05D000979 ORTHO05D003182 1.6e-14 82.4 50 74.0
Sp2g08500 Schrenkiella parvula HOM05D000979 ORTHO05D003182 1.6e-14 82.4 50 74.0
RcHm_v2.0_Chr4g0389601 Rosa chinensis HOM05D000979 ORTHO05D003182 2.0e-14 82.0 50 78.0
Glyma.20G210550 Glycine max HOM05D000979 ORTHO05D035937 2.7e-14 81.6 45 82.2
BcaC03g16587 Brassica carinata HOM05D000979 ORTHO05D003182 5.9e-14 80.5 50 72.0
A02p27900 Brassica napus HOM05D000979 ORTHO05D003182 5.9e-14 80.5 50 72.0
C02p44060 Brassica napus HOM05D000979 ORTHO05D003182 5.9e-14 80.5 50 72.0
BolC2t10449H Brassica oleracea HOM05D000979 ORTHO05D003182 5.9e-14 80.5 50 72.0
BraA02t07828Z Brassica rapa HOM05D000979 ORTHO05D003182 5.9e-14 80.5 50 72.0
THA.LOC104815980 Tarenaya hassleriana HOM05D000979 ORTHO05D003182 5.9e-14 80.5 50 74.0
SMO116G0477 Selaginella moellendorffii HOM05D000979 ORTHO05D003182 1.0e-13 79.7 50 74.0
Thhalv10003168m.g Eutrema salsugineum HOM05D000979 ORTHO05D003182 1.3e-13 79.3 50 72.0
Mapoly0113s0031 Marchantia polymorpha HOM05D000979 ORTHO05D003182 2.3e-13 78.6 50 74.0
CBR_g23002 Chara braunii HOM05D000979 ORTHO05D003182 8.6e-13 76.6 50 72.0
AagrBONN_evm.TU.Sc2ySwM_344.3650 Anthoceros agrestis HOM05D000979 ORTHO05D003182 1.1e-12 76.3 50 68.0
Pp3c17_13130 Physcomitrium patens HOM05D000979 ORTHO05D003182 1.5e-12 75.9 50 68.0
EL10Ac3g06835 Beta vulgaris HOM05D000979 ORTHO05D003182 8.0e-11 70.1 37 81.1


User provided reference genes

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