Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g05603_MAGBIO Magnolia biondii HOM05D002068 ORTHO05D002029 3.9e-60 234.6 116 100.0
TAR381G1067 Trochodendron aralioides HOM05D002068 ORTHO05D002029 1.0e-15 87.0 76 67.1
Nn1g05438 Nelumbo nucifera HOM05D002068 ORTHO05D002029 2.5e-14 82.4 67 65.7
Haze_22301 Corylus avellana HOM05D002068 ORTHO05D002029 1.2e-13 80.1 76 64.5
Hma1.2p1_0593F.1_g185620 Hydrangea macrophylla HOM05D002068 ORTHO05D002029 4.7e-13 78.2 79 59.5
QL12p037481 Quercus lobata HOM05D002068 ORTHO05D002029 8.0e-13 77.4 59 72.9
Rhsim06G0078500 Rhododendron simsii HOM05D002068 ORTHO05D002029 8.0e-13 77.4 62 67.7
TWI12G1282 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 4.0e-12 75.1 74 64.9
CiPaw.07G177400 Carya illinoinensis HOM05D002068 ORTHO05D002029 8.8e-12 73.9 76 60.5
Cc10_g06770 Coffea canephora HOM05D002068 ORTHO05D002029 2.0e-11 72.8 61 72.1
Cpa.g.sc36.170 Carica papaya HOM05D002068 ORTHO05D002029 4.4e-11 71.6 74 63.5
TAR625G1508 Trochodendron aralioides HOM05D002068 ORTHO05D002029 5.7e-11 71.2 67 62.7
MSTRG.22165 Avicennia marina HOM05D002068 ORTHO05D002029 1.7e-10 69.7 62 59.7
Potri.002G099900 Populus trichocarpa HOM05D002068 ORTHO05D002029 3.7e-10 68.6 77 57.1
CAN.G970.21 Capsicum annuum HOM05D002068 ORTHO05D002029 4.8e-10 68.2 74 58.1
Thecc.08G103100 Theobroma cacao HOM05D002068 ORTHO05D002029 8.3e-10 67.4 57 68.4
COL.COLO4_12019 Corchorus olitorius HOM05D002068 ORTHO05D002029 1.1e-09 67.0 57 68.4
Duzib093G1613 Durio zibethinus HOM05D002068 ORTHO05D002029 1.1e-09 67.0 57 68.4
MELO3C003561.2 Cucumis melo HOM05D002068 ORTHO05D002029 1.8e-09 66.2 59 64.4
MSTRG.24446 Avicennia marina HOM05D002068 ORTHO05D002029 3.1e-09 65.5 60 60.0
Duzib041G0330 Durio zibethinus HOM05D002068 ORTHO05D002029 3.1e-09 65.5 54 70.4
Solyc04g074520.1 Solanum lycopersicum HOM05D002068 ORTHO05D002029 3.1e-09 65.5 74 55.4
Sopen04g029540 Solanum pennellii HOM05D002068 ORTHO05D002029 3.1e-09 65.5 74 55.4
PGSC0003DMG400047327 Solanum tuberosum HOM05D002068 ORTHO05D002029 3.1e-09 65.5 74 55.4
Actinidia10341 Actinidia chinensis HOM05D002068 ORTHO05D002029 4.1e-09 65.1 67 62.7
ClCG11G014240 Citrullus lanatus HOM05D002068 ORTHO05D002029 4.1e-09 65.1 59 64.4
CsaV3_3G047610 Cucumis sativus L. HOM05D002068 ORTHO05D002029 4.1e-09 65.1 81 55.6
Dinv07067 Davidia involucrata HOM05D002068 ORTHO05D002029 5.4e-09 64.7 72 56.9
Duzib116G0768 Durio zibethinus HOM05D002068 ORTHO05D002029 7.0e-09 64.3 54 66.7
SGA_v2.0_scaffold28G11907 Striga asiatica HOM05D002068 ORTHO05D002029 7.0e-09 64.3 66 53.0
Atru.chr13.1127 Acer truncatum HOM05D002068 ORTHO05D002029 2.0e-08 62.8 56 60.7
Lj4C97T4 Lonicera japonica HOM05D002068 ORTHO05D002029 3.5e-08 62.0 60 60.0
Gohir.D06G034800 Gossypium hirsutum HOM05D002068 ORTHO05D002029 5.9e-08 61.2 52 67.3
Gorai.010G038300 Gossypium raimondii HOM05D002068 ORTHO05D002029 5.9e-08 61.2 52 67.3
Lsat_1_v5_gn_6_104380 Lactuca sativa HOM05D002068 ORTHO05D002029 5.9e-08 61.2 74 50.0
Prupe.1G522100 Prunus persica HOM05D002068 ORTHO05D002029 5.9e-08 61.2 57 61.4
Rhsim06G0150900 Rhododendron simsii HOM05D002068 ORTHO05D002029 5.9e-08 61.2 70 55.7
Glyma.04G099600 Glycine max HOM05D002068 ORTHO05D002029 1.0e-07 60.5 61 59.0
Psat0s4053g0080 Pisum sativum HOM05D002068 ORTHO05D002029 1.0e-07 60.5 61 57.4
Ciclev10001938m.g Citrus clementina HOM05D002068 ORTHO05D002029 1.3e-07 60.1 72 55.6
Migut.N02882 Erythranthe guttata HOM05D002068 ORTHO05D002029 1.7e-07 59.7 55 60.0
Glyma.06G101400 Glycine max HOM05D002068 ORTHO05D002029 1.7e-07 59.7 61 57.4
RhsimUnG0071300 Rhododendron simsii HOM05D002068 ORTHO05D002029 1.7e-07 59.7 74 52.7
Eucgr.F00371 Eucalyptus grandis HOM05D002068 ORTHO05D002029 2.3e-07 59.3 75 57.3
Ca_16041_v3 Cicer arietinum L. HOM05D002068 ORTHO05D002029 2.9e-07 58.9 61 60.7
Gohir.A05G224200 Gossypium hirsutum HOM05D002068 ORTHO05D002029 2.9e-07 58.9 55 65.5
Sed0007192 Sechium edule HOM05D002068 ORTHO05D002029 2.9e-07 58.9 59 61.0
VMungo1309G2330 Vigna mungo HOM05D002068 ORTHO05D002029 6.6e-07 57.8 58 58.6
Manes.18G025182 Manihot esculenta HOM05D002068 ORTHO05D002029 1.1e-06 57.0 73 53.4
MD08G1187500 Malus domestica HOM05D002068 ORTHO05D002029 1.5e-06 56.6 57 57.9
Medtr3g099400 Medicago truncatula HOM05D002068 ORTHO05D002029 1.9e-06 56.2 58 56.9
MD15G1373500 Malus domestica HOM05D002068 ORTHO05D002029 2.5e-06 55.8 57 57.9
Phvul.009G032600 Phaseolus vulgaris HOM05D002068 ORTHO05D002029 2.5e-06 55.8 56 58.9
Lalb_Chr11g0065291 Lupinus albus HOM05D002068 ORTHO05D002029 3.3e-06 55.5 58 56.9
RcHm_v2.0_Chr7g0242681 Rosa chinensis HOM05D002068 ORTHO05D002029 3.3e-06 55.5 81 49.4
FvH4_5g36700 Fragaria vesca HOM05D002068 ORTHO05D002029 4.2e-06 55.1 57 57.9
FAN08G1948 Fragaria x ananassa HOM05D002068 ORTHO05D002029 5.5e-06 54.7 57 57.9
TWI36G1169 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 5.5e-06 54.7 76 53.9
CANSAT25G1386 Cannabis sativa HOM05D002068 ORTHO05D002029 7.2e-06 54.3 64 56.2
FAN18G1436 Fragaria x ananassa HOM05D002068 ORTHO05D002029 9.5e-06 53.9 57 56.1
Gohir.A06G033900 Gossypium hirsutum HOM05D002068 ORTHO05D002029 9.5e-06 53.9 52 63.5
TPR.G14203 Trifolium pratense HOM05D002068 ORTHO05D002029 9.5e-06 53.9 68 52.9


User provided reference genes

Program Settings