Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g05359_MAGBIO Magnolia biondii HOM05D007533 ORTHO05D009622 6.9e-148 527.3 275 100.0
Nn1g09978 Nelumbo nucifera HOM05D007533 ORTHO05D009622 1.1e-92 344.0 182 96.7
Nn1g10040 Nelumbo nucifera HOM05D007533 ORTHO05D009622 1.1e-92 344.0 182 96.7
Aqoxy23s008 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 6.6e-90 334.7 182 95.1
Lj2P1223T74 Lonicera japonica HOM05D007533 ORTHO05D009622 1.5e-89 333.6 182 94.0
Lj2P1228T84 Lonicera japonica HOM05D007533 ORTHO05D009622 1.5e-89 333.6 182 94.0
Lj2P1231T101 Lonicera japonica HOM05D007533 ORTHO05D009622 1.5e-89 333.6 182 94.0
Aqoxy1G02967 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 1.9e-89 333.2 182 94.5
Hma1.2p1_0136F.1_g062009 Hydrangea macrophylla HOM05D007533 ORTHO05D009622 2.1e-88 329.7 182 93.4
DCAR_032459 Daucus carota HOM05D007533 ORTHO05D009622 1.8e-87 326.6 182 92.9
MSTRG.26054 Avicennia marina HOM05D007533 ORTHO05D009622 4.9e-85 318.5 180 91.7
Sed0020832 Sechium edule HOM05D007533 ORTHO05D009622 8.3e-85 317.8 182 91.2
HanXRQChr16g0504431 Helianthus annuus HOM05D007533 ORTHO05D009622 1.1e-84 317.4 182 91.8
HanXRQMTg0579131 Helianthus annuus HOM05D007533 ORTHO05D009622 1.1e-84 317.4 182 91.8
Lsat_1_v5_gn_0_35060 Lactuca sativa HOM05D007533 ORTHO05D009622 5.4e-84 315.1 182 91.2
HanXRQChr09g0253411 Helianthus annuus HOM05D007533 ORTHO05D009622 9.2e-84 314.3 182 91.2
Ah.10g028150 Amaranthus hybridus HOM05D007533 ORTHO05D009622 4.6e-83 312.0 179 90.5
Gorai.001G167400 Gossypium raimondii HOM05D007533 ORTHO05D009622 4.6e-83 312.0 174 92.0
RcHm_v2.0_MTg0498351 Rosa chinensis HOM05D007533 ORTHO05D009622 7.8e-83 311.2 182 88.5
CsaV3_UNG210000 Cucumis sativus L. HOM05D007533 ORTHO05D009622 8.6e-82 307.8 182 88.5
AUR62042328 Chenopodium quinoa HOM05D007533 ORTHO05D009622 5.6e-81 305.1 210 80.0
CANSAT16G0029 Cannabis sativa HOM05D007533 ORTHO05D009622 9.5e-81 304.3 182 88.5
Lj2P1226T70 Lonicera japonica HOM05D007533 ORTHO05D009622 2.1e-80 303.1 165 93.9
Dinv06666 Davidia involucrata HOM05D007533 ORTHO05D009622 6.2e-80 301.6 166 92.8
LjContig00439g0010342 Lotus japonicus HOM05D007533 ORTHO05D009622 2.6e-78 296.2 182 85.2
LjContig00439g0021951 Lotus japonicus HOM05D007533 ORTHO05D009622 2.6e-78 296.2 182 85.2
Glyma.17G185600 Glycine max HOM05D007533 ORTHO05D009622 2.9e-77 292.7 182 84.1
Solyc00g500302.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 3.7e-77 292.4 182 84.6
Solyc11g063573.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 3.7e-77 292.4 182 84.6
QL12p027939 Quercus lobata HOM05D007533 ORTHO05D009622 5.4e-76 288.5 179 82.1
arahy.Tifrunner.gnm1.ann1.6ILC2A Arachis hypogaea HOM05D007533 ORTHO05D009622 9.2e-76 287.7 174 86.2
arahy.Tifrunner.gnm1.ann1.R8TWAM Arachis hypogaea HOM05D007533 ORTHO05D009622 9.2e-76 287.7 174 86.2
Solyc00g500173.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 1.6e-75 287.0 182 83.0
Lalb_Chr00c21g0405841 Lupinus albus HOM05D007533 ORTHO05D009622 4.6e-75 285.4 175 85.1
Lalb_Chr00c24g0407011 Lupinus albus HOM05D007533 ORTHO05D009622 4.6e-75 285.4 175 85.1
AL9U10720 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 4.3e-73 278.9 182 81.3
CAN.G2446.3 Capsicum annuum HOM05D007533 ORTHO05D009622 4.3e-73 278.9 182 83.0
CAN.G2792.1 Capsicum annuum HOM05D007533 ORTHO05D009622 4.3e-73 278.9 182 83.0
Thhalv10023156m.g Eutrema salsugineum HOM05D007533 ORTHO05D009622 5.6e-73 278.5 182 81.3
Aqoxy12s024 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 7.3e-73 278.1 152 95.4
ATMG00640 Arabidopsis thaliana HOM05D007533 ORTHO05D009622 4.7e-72 275.4 182 80.2
CARHR283000 Cardamine hirsuta HOM05D007533 ORTHO05D009622 1.4e-71 273.9 182 80.2
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 6.8e-71 271.6 172 82.6
Nitab4.5_0010333g0060 Nicotiana tabacum HOM05D007533 ORTHO05D009622 4.4e-70 268.9 166 84.3
ATR0155G001 Amborella trichopoda HOM05D007533 ORTHO05D009622 2.9e-69 266.2 191 77.5
CAN.G1001.31 Capsicum annuum HOM05D007533 ORTHO05D009622 2.9e-69 266.2 182 78.0
CDE02G4305 Ceratophyllum demersum HOM05D007533 ORTHO05D009622 2.9e-69 266.2 148 91.2
Potri.007G061641 Populus trichocarpa HOM05D007533 ORTHO05D009622 3.8e-69 265.8 182 80.2
Potri.007G062602 Populus trichocarpa HOM05D007533 ORTHO05D009622 3.8e-69 265.8 182 80.2
Aa31csc1168G30 Aethionema arabicum HOM05D007533 ORTHO05D009622 9.3e-68 261.2 155 88.4
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.0e-66 257.7 149 90.6
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.0e-66 257.7 149 90.6
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 1.1e-65 254.2 139 92.1
CARHR288330 Cardamine hirsuta HOM05D007533 ORTHO05D009622 2.8e-64 249.6 145 90.3
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 1.9e-60 236.9 131 93.1
PGSC0003DMG400026520 Solanum tuberosum HOM05D007533 ORTHO05D009622 4.6e-59 232.3 138 85.5
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 4.3e-57 225.7 133 88.0
unitig_87.g27950 Utricularia gibba HOM05D007533 ORTHO05D009622 2.4e-55 219.9 130 86.9
Sopen00g001050 Solanum pennellii HOM05D007533 ORTHO05D009622 3.1e-55 219.5 133 84.2
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 5.3e-55 218.8 120 93.3
arahy.Tifrunner.gnm1.ann1.PN90EB Arachis hypogaea HOM05D007533 ORTHO05D009622 5.3e-55 218.8 120 93.3
A04p09330 Brassica napus HOM05D007533 ORTHO05D009622 1.7e-53 213.8 182 66.5
BraSC48t46232Z Brassica rapa HOM05D007533 ORTHO05D009622 1.7e-53 213.8 182 66.5
BraSC48t46320Z Brassica rapa HOM05D007533 ORTHO05D009622 1.7e-53 213.8 182 66.5
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.1e-52 211.1 133 80.5
C01p34790 Brassica napus HOM05D007533 ORTHO05D009622 9.3e-52 208.0 182 64.3
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 6.0e-51 205.3 146 76.0
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 6.0e-51 205.3 133 82.0
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.8e-50 203.8 109 94.5
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 1.1e-49 201.1 129 80.6
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 1.1e-49 201.1 129 80.6
Nitab4.5_0000172g1940 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.3e-49 199.5 182 63.7
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 4.3e-49 199.1 109 93.6
PGSC0003DMG400030942 Solanum tuberosum HOM05D007533 ORTHO05D009622 4.0e-47 192.6 126 77.0
SalBow1G6690 Salvia bowleyana HOM05D007533 ORTHO05D009622 2.2e-45 186.8 101 91.1
Nitab4.5_0012599g0080 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.5e-43 179.5 116 79.3
TPR.G21214 Trifolium pratense HOM05D007533 ORTHO05D009622 3.0e-42 176.4 106 84.0
Lsat_1_v5_gn_5_43041 Lactuca sativa HOM05D007533 ORTHO05D009622 6.3e-40 168.7 115 80.0
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 3.4e-38 162.9 98 83.7
HanXRQChr07g0189001 Helianthus annuus HOM05D007533 ORTHO05D009622 1.9e-36 157.1 97 87.6
BolC1t03447H Brassica oleracea HOM05D007533 ORTHO05D009622 1.2e-35 154.5 99 81.8
CAN.G649.12 Capsicum annuum HOM05D007533 ORTHO05D009622 4.6e-35 152.5 89 87.6
FAN20G2339 Fragaria x ananassa HOM05D007533 ORTHO05D010378 3.7e-32 142.9 86 86.0
BraSC54t46363Z Brassica rapa HOM05D007533 ORTHO05D009622 6.9e-31 138.7 86 84.9
Nitab4.5_0010333g0150 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.5e-30 137.5 88 84.1
HanXRQChr17g0567331 Helianthus annuus HOM05D007533 ORTHO05D009622 5.9e-30 135.6 73 93.2
Lsat_1_v5_gn_1_118900 Lactuca sativa HOM05D007533 ORTHO05D009622 2.1e-27 127.1 72 88.9
TPR.G39970 Trifolium pratense HOM05D007533 ORTHO05D009622 2.3e-26 123.6 75 86.7
SHI23927 Sapria himalayana HOM05D007533 ORTHO05D009622 2.0e-25 120.6 162 48.8
SHI19535 Sapria himalayana HOM05D000105 ORTHO05D000023 4.3e-25 119.4 73 82.2
Gohir.D01G116666 Gossypium hirsutum HOM05D007533 ORTHO05D009622 5.7e-25 119.0 64 90.6
C03p57120 Brassica napus HOM05D007533 ORTHO05D009622 1.2e-22 111.3 74 78.4
BolC3t17989H Brassica oleracea HOM05D007533 ORTHO05D009622 1.2e-22 111.3 74 78.4
ATR0807G043 Amborella trichopoda HOM05D007533 ORTHO05D009622 1.7e-21 107.5 70 81.4
Peaxi162Scf01098g00011 Petunia axillaris HOM05D007533 ORTHO05D009622 6.5e-21 105.5 64 85.9
Nitab4.5_0010333g0120 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.1e-20 104.8 73 72.6
SHI19534 Sapria himalayana HOM05D007533 ORTHO05D010378 1.1e-20 104.8 97 67.0
Nitab4.5_0002253g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.2e-20 103.2 82 67.1
Oeu041867.1 Olea europaea HOM05D007533 ORTHO05D009622 3.6e-19 99.8 60 81.7
Nitab4.5_0000068g0090 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.0e-18 98.2 68 80.9
Nitab4.5_0000832g0090 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.3e-10 70.5 60 61.7
GSVIVG01010884001 Vitis vinifera HOM05D007533 ORTHO05D009622 2.6e-09 67.0 35 85.7
Solyc06g042990.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 3.3e-09 66.6 41 78.0
Nitab4.5_0000172g2020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.3e-08 64.7 73 52.1
Peaxi162Scf00673g00229 Petunia axillaris HOM05D011380 ORTHO05D016005 1.7e-08 64.3 43 81.4
Potri.007G062422 Populus trichocarpa HOM05D007533 ORTHO05D010378 3.7e-08 63.2 54 68.5
CDE02G0940 Ceratophyllum demersum HOM05D000131 ORTHO05D000086 4.8e-08 62.8 39 76.9
Nitab4.5_0000034g0140 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.7e-06 57.0 64 53.1


User provided reference genes

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