Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g04587_MAGBIO Magnolia biondii HOM05D000391 ORTHO05D010205 6.4e-84 313.9 147 100.0
MBI05_g38020_MAGBIO Magnolia biondii HOM05D000391 ORTHO05D010205 8.3e-23 110.9 164 45.7
Duzib128G0083 Durio zibethinus HOM05D000391 ORTHO05D010205 4.0e-17 92.0 160 39.4
Ciclev10021701m.g Citrus clementina HOM05D000391 ORTHO05D010205 6.8e-17 91.3 160 38.1
Thecc.05G246500 Theobroma cacao HOM05D000391 ORTHO05D010205 8.9e-17 90.9 166 38.0
EL10Ac5g11765 Beta vulgaris HOM05D000391 ORTHO05D010205 2.6e-16 89.4 167 35.9
CANSAT78G1740 Cannabis sativa HOM05D000391 ORTHO05D010205 4.4e-16 88.6 141 41.1
Peaxi162Scf00061g02913 Petunia axillaris HOM05D000391 ORTHO05D010205 4.4e-16 88.6 131 39.7
COL.COLO4_32971 Corchorus olitorius HOM05D000391 ORTHO05D010205 1.7e-15 86.7 160 38.8
Rhsim03G0054200 Rhododendron simsii HOM05D000391 ORTHO05D010205 1.7e-15 86.7 160 35.0
Atru.chr2.1410 Acer truncatum HOM05D000391 ORTHO05D010205 3.7e-15 85.5 161 36.0
vmacro07551 Vaccinium macrocarpon HOM05D000391 ORTHO05D010205 3.7e-15 85.5 160 36.2
Gohir.D13G167900 Gossypium hirsutum HOM05D000391 ORTHO05D010205 4.9e-15 85.1 160 35.6
Manes.09G138900 Manihot esculenta HOM05D000391 ORTHO05D010205 6.3e-15 84.7 160 35.6
AUR62039724 Chenopodium quinoa HOM05D000391 ORTHO05D010205 1.8e-14 83.2 161 33.5
ClCG10G013610 Citrullus lanatus HOM05D000391 ORTHO05D010205 3.1e-14 82.4 131 39.7
DCAR_009078 Daucus carota HOM05D000391 ORTHO05D010205 3.1e-14 82.4 183 33.9
Actinidia37793 Actinidia chinensis HOM05D000391 ORTHO05D010205 4.1e-14 82.0 163 34.4
Dinv25099 Davidia involucrata HOM05D000391 ORTHO05D010205 4.1e-14 82.0 164 34.1
Gohir.A13G165000 Gossypium hirsutum HOM05D000391 ORTHO05D010205 5.4e-14 81.6 160 34.4
Sabra13G0049500 Salix brachista HOM05D000391 ORTHO05D010205 5.4e-14 81.6 161 34.8
Cpa.g.sc161.4 Carica papaya HOM05D000391 ORTHO05D010205 7.0e-14 81.3 160 35.0
Gorai.013G194300 Gossypium raimondii HOM05D000391 ORTHO05D010205 9.2e-14 80.9 159 34.6
Medtr6g028030 Medicago truncatula HOM05D000391 ORTHO05D010205 2.7e-13 79.3 161 36.6
MD12G1007300 Malus domestica HOM05D000391 ORTHO05D010205 3.5e-13 79.0 162 33.3
Nitab4.5_0000098g0060 Nicotiana tabacum HOM05D000391 ORTHO05D010205 5.9e-13 78.2 153 34.0
TPR.G29872 Trifolium pratense HOM05D000391 ORTHO05D010205 5.9e-13 78.2 160 36.2
VMungo0464G0539 Vigna mungo HOM05D000391 ORTHO05D010205 7.8e-13 77.8 157 33.1
MSTRG.19350 Avicennia marina HOM05D000391 ORTHO05D010205 1.3e-12 77.0 163 35.6
CSS0014578 Camellia sinensis var. sinensis HOM05D000391 ORTHO05D010205 1.7e-12 76.6 162 32.1
Potri.013G055000 Populus trichocarpa HOM05D000391 ORTHO05D010205 1.7e-12 76.6 161 32.9
Oeu044646.1 Olea europaea HOM05D000391 ORTHO05D010205 2.3e-12 76.3 159 33.3
AUR62036275 Chenopodium quinoa HOM05D000391 ORTHO05D010205 3.8e-12 75.5 161 31.7
Ca_25692_v3 Cicer arietinum L. HOM05D000391 ORTHO05D010205 5.0e-12 75.1 159 33.3
arahy.Tifrunner.gnm1.ann1.L1PEYH Arachis hypogaea HOM05D000391 ORTHO05D010205 6.6e-12 74.7 142 33.8
CSS0049564 Camellia sinensis var. sinensis HOM05D000391 ORTHO05D010205 8.6e-12 74.3 162 32.7
MBI05_g43831_MAGBIO Magnolia biondii HOM05D000391 ORTHO05D010205 1.9e-11 73.2 42 88.1
Aqoxy2G00606 Aquilegia oxysepala HOM05D000391 ORTHO05D010205 2.5e-11 72.8 164 31.1
SGA_v2.0_scaffold31G12801 Striga asiatica HOM05D000391 ORTHO05D010205 2.5e-11 72.8 159 31.4
Phvul.004G052200 Phaseolus vulgaris HOM05D000391 ORTHO05D010205 5.6e-11 71.6 157 31.8
CsaV3_3G043050 Cucumis sativus L. HOM05D000391 ORTHO05D010205 7.3e-11 71.2 161 32.3
Lalb_Chr21g0317251 Lupinus albus HOM05D000391 ORTHO05D010205 9.5e-11 70.9 160 33.1
THA.LOC104800242 Tarenaya hassleriana HOM05D000391 ORTHO05D010205 9.5e-11 70.9 143 32.9
Prupe.7G008200 Prunus persica HOM05D000391 ORTHO05D010205 1.6e-10 70.1 161 31.7
PGR042G0336 Punica granatum HOM05D000391 ORTHO05D010205 1.6e-10 70.1 166 31.3
arahy.Tifrunner.gnm1.ann1.5PC6AH Arachis hypogaea HOM05D000391 ORTHO05D010205 4.7e-10 68.6 160 30.0
THA.LOC104805772 Tarenaya hassleriana HOM05D000391 ORTHO05D010205 4.7e-10 68.6 161 30.4
SalBow3G3698 Salvia bowleyana HOM05D000391 ORTHO05D010205 6.1e-10 68.2 160 31.2
Nitab4.5_0013371g0030 Nicotiana tabacum HOM05D000391 ORTHO05D010205 1.4e-09 67.0 186 27.4
MELO3C026608.2 Cucumis melo HOM05D000391 ORTHO05D010205 1.8e-09 66.6 160 30.0
TWI60G1672 Tripterygium wilfordii HOM05D000391 ORTHO05D010205 1.8e-09 66.6 162 32.7
PSO339G0076 Papaver somniferum HOM05D000391 ORTHO05D010205 2.3e-09 66.2 171 33.3
Migut.J00762 Erythranthe guttata HOM05D000391 ORTHO05D010205 5.2e-09 65.1 161 30.4
Sed0019549 Sechium edule HOM05D000391 ORTHO05D010205 2.6e-08 62.8 161 28.0
GSVIVG01022465001 Vitis vinifera HOM05D000391 ORTHO05D010205 2.6e-08 62.8 159 28.9
Cc06_g07260 Coffea canephora HOM05D000391 ORTHO05D010205 7.5e-08 61.2 161 29.8
ATR0697G219 Amborella trichopoda HOM05D000391 ORTHO05D010205 9.8e-08 60.8 164 28.0
HanXRQChr09g0245741 Helianthus annuus HOM05D000391 ORTHO05D010205 2.2e-07 59.7 161 28.6
Os09g0453300 Oryza sativa ssp. japonica HOM05D000391 ORTHO05D010205 2.9e-07 59.3 164 28.0
Eucgr.A02122 Eucalyptus grandis HOM05D000391 ORTHO05D010205 4.1e-06 55.5 43 65.1
Hma1.2p1_0768F.1_g215560 Hydrangea macrophylla HOM05D000391 ORTHO05D010205 9.2e-06 54.3 46 56.5


User provided reference genes

Program Settings