Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g04122_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000002 1.1e-202 709.9 391 100.0
MBI14_g09784_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000002 3.4e-63 246.5 163 76.7
CSS0000480 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.2e-37 160.2 296 35.8
CSS0024529 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.2e-37 160.2 296 35.8
QL03p069728 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-36 158.3 332 34.0
QL09p002786 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-36 158.3 332 34.0
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 1.0e-35 155.2 334 33.5
MBI17_g12501_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D012524 8.6e-35 152.1 110 68.2
QL01p015808 Quercus lobata HOM05D000004 ORTHO05D000002 8.6e-35 152.1 334 33.2
QL04p062382 Quercus lobata HOM05D000004 ORTHO05D000002 8.6e-35 152.1 322 32.6
QL04p063674 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-33 148.3 294 34.4
Hma1.2p1_1832F.1_g304590 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.5e-31 141.4 274 34.7
QL02p103579 Quercus lobata HOM05D000004 ORTHO05D000002 6.4e-30 136.0 328 31.4
QL93p0053_0688 Quercus lobata HOM05D000004 ORTHO05D000002 4.1e-29 133.3 328 31.4
RcHm_v2.0_Chr7g0243211 Rosa chinensis HOM05D000004 ORTHO05D000002 7.1e-29 132.5 296 31.4
QL02p062220 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-28 131.7 328 31.1
QL05p084077 Quercus lobata HOM05D000004 ORTHO05D000002 1.6e-28 131.3 328 31.1
QL12p028861 Quercus lobata HOM05D000004 ORTHO05D000002 3.5e-28 130.2 328 30.8
QL05p044227 Quercus lobata HOM05D000004 ORTHO05D000002 6.0e-28 129.4 327 30.6
RcHm_v2.0_Chr5g0015161 Rosa chinensis HOM05D000004 ORTHO05D000002 7.3e-26 122.5 146 43.2
Rhsim04G0004700 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.8e-25 120.6 148 41.9
Hund05069 Selenicereus undatus HOM05D014633 ORTHO05D012524 4.7e-25 119.8 290 27.6
SHI00352 Sapria himalayana HOM05D000004 ORTHO05D000002 6.2e-25 119.4 127 48.0
SHI33973 Sapria himalayana HOM05D000004 ORTHO05D000002 6.2e-25 119.4 127 48.8
SHI50854 Sapria himalayana HOM05D000004 ORTHO05D000002 6.2e-25 119.4 127 48.0
SHI50872 Sapria himalayana HOM05D000004 ORTHO05D000002 6.2e-25 119.4 127 48.0
SHI54723 Sapria himalayana HOM05D000004 ORTHO05D000002 6.2e-25 119.4 127 48.0
SHI55032 Sapria himalayana HOM05D000004 ORTHO05D000002 6.2e-25 119.4 127 48.0
SHI15021 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-24 118.6 127 47.2
QL04p013037 Quercus lobata HOM05D000004 ORTHO05D000002 1.4e-24 118.2 334 30.2
SHI20505 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-24 118.2 127 48.0
SHI54655 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-24 118.2 127 48.0
QL05p008770 Quercus lobata HOM05D000004 ORTHO05D000002 1.8e-24 117.9 334 30.5
QL11p032775 Quercus lobata HOM05D000004 ORTHO05D000002 3.1e-24 117.1 334 30.2
SHI03109 Sapria himalayana HOM05D000004 ORTHO05D000002 5.2e-24 116.3 127 47.2
SHI50759 Sapria himalayana HOM05D000004 ORTHO05D000002 5.2e-24 116.3 127 47.2
SHI51648 Sapria himalayana HOM05D000004 ORTHO05D000002 8.9e-24 115.5 127 48.0
SHI07308 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-23 114.8 127 46.5
SHI08945 Sapria himalayana HOM05D000004 ORTHO05D000002 2.6e-23 114.0 123 48.0
SHI50378 Sapria himalayana HOM05D000004 ORTHO05D000002 2.6e-23 114.0 127 46.5
SHI51847 Sapria himalayana HOM05D000004 ORTHO05D000002 2.6e-23 114.0 127 47.2
SHI51873 Sapria himalayana HOM05D000004 ORTHO05D000002 3.4e-23 113.6 127 46.5
QL05p022806 Quercus lobata HOM05D000004 ORTHO05D000002 5.8e-23 112.8 123 46.3
Hma1.2p1_0975F.1_g243150 Hydrangea macrophylla HOM05D034186 ORTHO05D000002 9.9e-23 112.1 162 39.5
Thecc.03G066200 Theobroma cacao HOM05D000004 ORTHO05D000002 3.8e-22 110.2 279 25.1
QL05p061522 Quercus lobata HOM05D000004 ORTHO05D000002 6.4e-22 109.4 272 31.2
TWI12G0374 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.4e-22 109.0 297 25.6
TWI74G1083 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.1e-21 108.6 297 25.9
QL05p006270 Quercus lobata HOM05D000004 ORTHO05D000002 1.4e-21 108.2 151 41.7
Thecc.01G232700 Theobroma cacao HOM05D000004 ORTHO05D000002 1.4e-21 108.2 279 24.7
SHI47463 Sapria himalayana HOM05D000004 ORTHO05D000002 9.2e-21 105.5 138 43.5
TWI63G0248 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.7e-20 104.0 299 24.7
Rhsim06G0128700 Rhododendron simsii HOM05D000004 ORTHO05D012524 4.6e-20 103.2 138 42.0
TWI36G1097 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.0e-19 102.1 161 34.8
Hma1.2p1_1287F.1_g273240 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 8.6e-19 99.0 128 40.6
TWI77G0040 Tripterygium wilfordii HOM05D000188 ORTHO05D000362 4.3e-18 96.7 279 24.4
TWI73G0917 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.6e-18 96.3 124 38.7
Thecc.05G097300 Theobroma cacao HOM05D000004 ORTHO05D000002 9.6e-18 95.5 134 33.6
TWI14G0868 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.6e-17 93.6 309 25.2
SEGI_34349 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.2e-17 92.8 122 39.3
Hma1.2p1_1483F.1_g286280 Hydrangea macrophylla HOM05D000004 ORTHO05D011737 3.1e-16 90.5 88 51.1
MBI10_g22523_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000002 3.1e-16 90.5 91 58.2
TWI09G1040 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.1e-16 90.5 153 34.6
SEGI_07278 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.0e-16 90.1 122 38.5
FvH4_2g19253 Fragaria vesca HOM05D000004 ORTHO05D000002 1.2e-15 88.6 130 31.5
MBI02_g46969_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000002 1.2e-15 88.6 119 41.2
HPP92_018563 Vanilla planifolia HOM05D000004 ORTHO05D000002 1.2e-15 88.6 215 28.4
TWI32G0910 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.4e-15 87.0 137 36.5
Atru.chr4.2642 Acer truncatum HOM05D000004 ORTHO05D000002 4.4e-15 86.7 131 34.4
Rhsim11G0031100 Rhododendron simsii HOM05D000072 ORTHO05D000026 4.9e-14 83.2 129 34.9
CSS0023711 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.4e-14 82.8 143 32.2
CSS0043413 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-13 81.6 143 31.5
FvH4_4g12741 Fragaria vesca HOM05D000004 ORTHO05D000002 1.4e-13 81.6 127 33.9
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 1.9e-13 81.3 123 33.3
Rhsim03G0243100 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.9e-13 81.3 204 29.4
CSS0034640 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.2e-13 80.5 119 34.5
FvH4_2g17922 Fragaria vesca HOM05D000004 ORTHO05D000002 3.2e-13 80.5 128 34.4
PSO339G1989 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-13 80.5 132 37.1
CSS0049161 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.2e-13 80.1 124 33.1
Atru.chr6.910 Acer truncatum HOM05D000004 ORTHO05D000002 5.4e-13 79.7 104 42.3
CSS0008496 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.1e-13 79.3 161 32.3
CSS0023637 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.3e-13 79.0 143 31.5
Hma1.2p1_0500F.1_g166980 Hydrangea macrophylla HOM05D014633 ORTHO05D000002 9.3e-13 79.0 79 50.6
RcHm_v2.0_Chr4g0427231 Rosa chinensis HOM05D000004 ORTHO05D000002 9.3e-13 79.0 140 32.9
Hma1.2p1_3477F.1_g336310 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.1e-12 77.8 292 21.6
Rhsim02G0024000 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.7e-12 77.4 97 37.1
FvH4_4g14287 Fragaria vesca HOM05D000004 ORTHO05D000002 3.5e-12 77.0 165 29.7
PSO596G0027 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-12 76.6 129 31.0
Prupe.8G229300 Prunus persica HOM05D000650 ORTHO05D000735 4.6e-12 76.6 126 31.7
RcHm_v2.0_Chr3g0461871 Rosa chinensis HOM05D000004 ORTHO05D000002 4.6e-12 76.6 123 33.3
TWI34G1848 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.6e-12 76.6 213 25.4
Atru.chr8.135 Acer truncatum HOM05D000004 ORTHO05D000002 6.0e-12 76.3 108 41.7
PSO063G4659 Papaver somniferum HOM05D000004 ORTHO05D000002 6.0e-12 76.3 127 33.9
FvH4_5g27998 Fragaria vesca HOM05D000004 ORTHO05D004145 7.8e-12 75.9 75 50.7
FvH4_5g28291 Fragaria vesca HOM05D000004 ORTHO05D000563 7.8e-12 75.9 75 50.7
CSS0011571 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-11 75.5 146 30.8
Atru.chr6.1123 Acer truncatum HOM05D000004 ORTHO05D000002 1.7e-11 74.7 97 41.2
CSS0022143 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-11 74.7 112 34.8
Atru.chr6.117 Acer truncatum HOM05D000004 ORTHO05D000002 3.0e-11 73.9 109 33.9
ECA247G0559 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.9e-11 73.6 124 33.1
Hund09531 Selenicereus undatus HOM05D011119 ORTHO05D012524 5.1e-11 73.2 103 35.0
HPP92_004663 Vanilla planifolia HOM05D000004 ORTHO05D000002 6.6e-11 72.8 84 41.7
Rhsim10G0140700 Rhododendron simsii HOM05D002417 ORTHO05D002589 8.7e-11 72.4 111 33.3
TWI38G0978 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.7e-11 72.4 153 32.7
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 1.1e-10 72.0 71 47.9
FvH4_5g27471 Fragaria vesca HOM05D000004 ORTHO05D000563 1.1e-10 72.0 75 49.3
Rhsim02G0058400 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.9e-10 71.2 89 38.2
Rhsim06G0164300 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.5e-10 70.9 111 33.3
ECA232G4741 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-10 70.5 124 32.3
TWI14G0262 Tripterygium wilfordii HOM05D000650 ORTHO05D000735 3.3e-10 70.5 329 20.4
ECA232G2839 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.3e-10 70.1 124 32.3
ECA246G2746 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.3e-10 70.1 124 32.3
ECA247G1511 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.3e-10 70.1 156 29.5
Rhsim08G0121000 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.3e-10 70.1 134 32.1
Rhsim02G0214500 Rhododendron simsii HOM05D000004 ORTHO05D000002 7.3e-10 69.3 111 32.4
SEGI_39755 Sequoiadendron giganteum HOM05D001337 ORTHO05D000002 7.3e-10 69.3 159 26.4
ECA246G3946 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-09 68.6 92 33.7
EL10Ac6g14457 Beta vulgaris HOM05D000004 ORTHO05D000002 1.6e-09 68.2 124 31.5
ECA232G4259 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-09 67.8 153 28.1
CSS0004631 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.8e-09 67.4 82 40.2
ECA246G4126 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.8e-09 67.4 124 30.6
SEGI_23301 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.8e-09 67.4 130 30.0
ECA246G3393 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-09 67.0 156 28.8
ECA248G2257 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-09 67.0 124 30.6
ECA236G0802 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.8e-09 66.6 103 35.0
ECA248G3813 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.8e-09 66.6 124 31.5
PSO063G0884 Papaver somniferum HOM05D001642 ORTHO05D000002 4.8e-09 66.6 88 37.5
Thecc.01G168500 Theobroma cacao HOM05D000004 ORTHO05D000002 4.8e-09 66.6 279 20.1
ECA248G2597 Erigeron canadensis HOM05D000006 ORTHO05D000002 6.2e-09 66.2 135 28.1
QL04p022016 Quercus lobata HOM05D000004 ORTHO05D000002 6.2e-09 66.2 124 29.0
Hma1.2p1_0296F.1_g116850 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 8.1e-09 65.9 120 30.8
SEGI_40658 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 8.1e-09 65.9 127 29.9
CiPaw.07G080200 Carya illinoinensis HOM05D011671 ORTHO05D013298 1.1e-08 65.5 93 39.8
ClCG02G009860 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.1e-08 65.5 122 28.7
Rhsim07G0138000 Rhododendron simsii HOM05D001950 ORTHO05D001926 1.1e-08 65.5 89 37.1
BcaC03g16463 Brassica carinata HOM05D000004 ORTHO05D000002 1.4e-08 65.1 97 34.0
BcaC03g16674 Brassica carinata HOM05D000004 ORTHO05D000002 1.4e-08 65.1 92 34.8
ECA240G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-08 65.1 124 31.5
Hma1.2p1_0001F.1_g001760 Hydrangea macrophylla HOM05D000004 ORTHO05D036400 1.4e-08 65.1 125 34.4
QL04p050706 Quercus lobata HOM05D000059 ORTHO05D009759 1.4e-08 65.1 94 38.3
ECA246G4960 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-08 64.7 124 30.6
Rhsim06G0081400 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.8e-08 64.7 105 32.4
TWI39G0034 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.8e-08 64.7 108 31.5
ECA247G1778 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-08 64.3 124 29.8
PSO063G7105 Papaver somniferum HOM05D010112 ORTHO05D000002 2.4e-08 64.3 104 32.7
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 3.1e-08 63.9 106 32.1
ECA246G0636 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-08 63.9 124 29.0
ECA248G2368 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-08 63.9 103 33.0
RhsimUnG0220300 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.1e-08 63.9 89 36.0
SEGI_32472 Sequoiadendron giganteum HOM05D000028 ORTHO05D000296 3.1e-08 63.9 130 29.2
ECA238G4663 Erigeron canadensis HOM05D000006 ORTHO05D000002 4.0e-08 63.5 124 29.8
ECA240G0185 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-08 63.5 146 26.0
ECA248G3536 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-08 63.5 124 30.6
ECA236G2047 Erigeron canadensis HOM05D000002 ORTHO05D002065 5.3e-08 63.2 126 32.5
ECA238G4528 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-08 63.2 93 35.5
ECA246G2972 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-08 63.2 124 29.8
ECA234G3312 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.0e-08 62.4 126 29.4
ECA238G1029 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 62.0 133 30.8
ECA234G2194 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 61.2 92 33.7
ECA238G2069 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 61.2 124 30.6
ECA248G0423 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 61.2 124 28.2
FvH4_5g25851 Fragaria vesca HOM05D000004 ORTHO05D000002 2.0e-07 61.2 86 37.2
ECA232G2862 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.4e-07 60.5 158 26.6
ECA240G2139 Erigeron canadensis HOM05D000006 ORTHO05D000002 4.5e-07 60.1 97 30.9
ECA248G3424 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.6e-07 59.3 124 28.2
Rhsim04G0077500 Rhododendron simsii HOM05D000004 ORTHO05D000002 9.9e-07 58.9 81 38.3
ECA240G2450 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 58.5 88 34.1
ECA238G0392 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-06 58.2 92 31.5
SEGI_22387 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.7e-06 58.2 79 40.5
Hma1.2p1_1135F.1_g260450 Hydrangea macrophylla HOM05D011671 ORTHO05D013298 2.2e-06 57.8 62 43.5
PSO063G5531 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-06 57.4 82 32.9
Prupe.8G084500 Prunus persica HOM05D000004 ORTHO05D000002 2.9e-06 57.4 84 29.8
THA.LOC104815179 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.9e-06 57.4 101 29.7
BcaC05g27996 Brassica carinata HOM05D000004 ORTHO05D000002 3.8e-06 57.0 61 42.6
HanXRQChr10g0318501 Helianthus annuus HOM05D000004 ORTHO05D000002 3.8e-06 57.0 118 28.0
Atru.chr10.1012 Acer truncatum HOM05D000004 ORTHO05D000002 4.9e-06 56.6 75 38.7
THA.LOC104805028 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.9e-06 56.6 101 29.7
THA.LOC109116038 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.4e-06 56.2 101 29.7
Atru.chr5.1103 Acer truncatum HOM05D000004 ORTHO05D000002 8.4e-06 55.8 92 30.4
ECA233G5372 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.4e-06 55.8 137 25.5
Rhsim08G0165700 Rhododendron simsii HOM05D011420 ORTHO05D019352 8.4e-06 55.8 94 29.8


User provided reference genes

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