Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g04120_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 1.7e-91 339.3 177 100.0
MBI07_g09559_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 1.5e-42 176.8 166 65.7
Duzib235G1498 Durio zibethinus HOM05D000828 ORTHO05D000623 1.7e-22 110.2 180 39.4
Potri.004G058200 Populus trichocarpa HOM05D000828 ORTHO05D000623 2.9e-22 109.4 171 39.8
Thecc.06G168900 Theobroma cacao HOM05D000828 ORTHO05D000623 2.9e-22 109.4 173 39.3
COL.COLO4_31276 Corchorus olitorius HOM05D000828 ORTHO05D000623 1.1e-21 107.5 178 38.8
TAR624G1056 Trochodendron aralioides HOM05D000828 ORTHO05D000623 1.4e-21 107.1 173 38.7
Gohir.A10G036300 Gossypium hirsutum HOM05D000828 ORTHO05D000623 2.5e-21 106.3 186 38.2
Gohir.D10G037000 Gossypium hirsutum HOM05D000828 ORTHO05D000623 5.5e-21 105.1 186 38.2
CSS0004670 Camellia sinensis var. sinensis HOM05D000828 ORTHO05D000623 7.1e-21 104.8 183 38.3
CSS0046843 Camellia sinensis var. sinensis HOM05D000828 ORTHO05D000623 1.6e-20 103.6 183 38.3
Gorai.011G038900 Gossypium raimondii HOM05D000828 ORTHO05D000623 1.6e-20 103.6 186 37.6
Aqoxy1G02032 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 4.6e-20 102.1 181 35.9
Nn1g09159 Nelumbo nucifera HOM05D000828 ORTHO05D000623 6.0e-20 101.7 173 39.3
Hma1.2p1_0215F.1_g090870 Hydrangea macrophylla HOM05D000828 ORTHO05D000623 1.0e-19 100.9 179 35.8
Migut.M01028 Erythranthe guttata HOM05D000828 ORTHO05D000623 2.3e-19 99.8 185 36.8
QL05p047746 Quercus lobata HOM05D000828 ORTHO05D000623 3.9e-19 99.0 180 36.1
Oeu039906.1 Olea europaea HOM05D000828 ORTHO05D000623 8.7e-19 97.8 173 35.8
Manes.17G056900 Manihot esculenta HOM05D000828 ORTHO05D000623 1.9e-18 96.7 171 36.8
Ciclev10017869m.g Citrus clementina HOM05D000828 ORTHO05D000623 1.6e-17 93.6 115 47.8
Prupe.4G062700 Prunus persica HOM05D000828 ORTHO05D000623 1.6e-17 93.6 171 36.8
PSO541G3344 Papaver somniferum HOM05D000828 ORTHO05D000623 2.8e-17 92.8 173 37.0
EL10Ac8g20585 Beta vulgaris HOM05D000828 ORTHO05D000623 3.7e-17 92.4 170 35.9
Glyma.13G228600 Glycine max HOM05D000828 ORTHO05D000623 8.2e-17 91.3 172 34.9
MD05G1299100 Malus domestica HOM05D000828 ORTHO05D000623 8.2e-17 91.3 169 34.3
PSO675G0520 Papaver somniferum HOM05D000828 ORTHO05D000623 1.4e-16 90.5 173 37.0
Cc02_g15140 Coffea canephora HOM05D000828 ORTHO05D000623 4.1e-16 89.0 175 36.6
FAN25G1080 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.2e-15 87.4 184 35.9
Migut.H01436 Erythranthe guttata HOM05D000828 ORTHO05D000623 2.0e-15 86.7 187 33.7
FAN21G2654 Fragaria x ananassa HOM05D000828 ORTHO05D000623 2.0e-15 86.7 184 36.4
Nitab4.5_0008430g0040 Nicotiana tabacum HOM05D000828 ORTHO05D000623 4.5e-15 85.5 176 33.0
FAN16G0165 Fragaria x ananassa HOM05D000828 ORTHO05D000623 5.8e-15 85.1 184 36.4
CiPaw.10G060100 Carya illinoinensis HOM05D000828 ORTHO05D000623 7.6e-15 84.7 176 35.2
AT4G18650 Arabidopsis thaliana HOM05D000828 ORTHO05D000623 1.0e-14 84.3 166 33.7
FvH4_3g07650 Fragaria vesca HOM05D000828 ORTHO05D000623 1.0e-14 84.3 184 35.9
FAN11G4025 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.0e-14 84.3 184 35.9
Atru.chr10.1647 Acer truncatum HOM05D000828 ORTHO05D000623 1.3e-14 84.0 176 31.8
Cpa.g.sc7.81 Carica papaya HOM05D000828 ORTHO05D000623 1.3e-14 84.0 113 38.9
Glyma.15G083900 Glycine max HOM05D000828 ORTHO05D000623 1.3e-14 84.0 171 32.7
RcHm_v2.0_Chr5g0011031 Rosa chinensis HOM05D000828 ORTHO05D000623 1.3e-14 84.0 174 36.2
Aa31LG6G1400 Aethionema arabicum HOM05D000828 ORTHO05D000623 1.7e-14 83.6 181 34.8
Sabra04G0037800 Salix brachista HOM05D000828 ORTHO05D000623 2.2e-14 83.2 119 42.9
CARHR225510 Cardamine hirsuta HOM05D000828 ORTHO05D000623 6.5e-14 81.6 166 33.7
Nitab4.5_0000605g0060 Nicotiana tabacum HOM05D000828 ORTHO05D000623 6.5e-14 81.6 177 33.9
PGR031G0305 Punica granatum HOM05D000828 ORTHO05D000623 6.5e-14 81.6 182 34.1
Sc05g0007040 Simmondsia chinensis HOM05D000828 ORTHO05D000623 6.5e-14 81.6 161 38.5
AL7G35610 Arabidopsis lyrata HOM05D000828 ORTHO05D000623 1.9e-13 80.1 174 33.9
Atru.chr10.1648 Acer truncatum HOM05D000828 ORTHO05D000623 4.2e-13 79.0 176 30.7
AUR62027695 Chenopodium quinoa HOM05D000828 ORTHO05D000623 5.5e-13 78.6 170 32.9
Dinv16788 Davidia involucrata HOM05D000828 ORTHO05D000623 9.3e-13 77.8 77 57.1
Medtr2g016330 Medicago truncatula HOM05D000828 ORTHO05D000623 9.3e-13 77.8 118 42.4
Medtr2g016370 Medicago truncatula HOM05D000828 ORTHO05D000623 9.3e-13 77.8 118 42.4
Peaxi162Scf00768g00031 Petunia axillaris HOM05D000828 ORTHO05D000623 1.6e-12 77.0 176 31.8
arahy.Tifrunner.gnm1.ann1.DXWW21 Arachis hypogaea HOM05D000828 ORTHO05D000623 2.1e-12 76.6 171 31.6
Ca_00445_v3 Cicer arietinum L. HOM05D000828 ORTHO05D000623 2.7e-12 76.3 168 32.1
Psat1g197080 Pisum sativum HOM05D000828 ORTHO05D000623 4.6e-12 75.5 178 32.0
Sp7g17390 Schrenkiella parvula HOM05D000828 ORTHO05D000623 7.9e-12 74.7 169 32.5
A01p10690 Brassica napus HOM05D000828 ORTHO05D000623 1.0e-11 74.3 178 33.7
C01p12620 Brassica napus HOM05D000828 ORTHO05D000623 1.0e-11 74.3 178 33.7
BolC1t01239H Brassica oleracea HOM05D000828 ORTHO05D000623 1.0e-11 74.3 178 33.7
BraA01t01015Z Brassica rapa HOM05D000828 ORTHO05D000623 1.0e-11 74.3 178 33.7
Thhalv10027388m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 1.0e-11 74.3 166 31.9
CAN.G370.94 Capsicum annuum HOM05D000828 ORTHO05D000623 1.3e-11 73.9 180 33.9
Sopen02g021570 Solanum pennellii HOM05D000828 ORTHO05D000623 1.8e-11 73.6 164 33.5
Lsat_1_v5_gn_7_25200 Lactuca sativa HOM05D000828 ORTHO05D000623 3.0e-11 72.8 168 32.1
Lalb_Chr15g0086121 Lupinus albus HOM05D000828 ORTHO05D000623 3.0e-11 72.8 176 31.8
DCAR_009598 Daucus carota HOM05D000828 ORTHO05D000623 3.9e-11 72.4 120 38.3
Solyc02g073580.1 Solanum lycopersicum HOM05D000828 ORTHO05D000623 3.9e-11 72.4 164 33.5
PGSC0003DMG400010193 Solanum tuberosum HOM05D000828 ORTHO05D000623 5.1e-11 72.0 164 33.5
Actinidia16789 Actinidia chinensis HOM05D000828 ORTHO05D000623 6.7e-11 71.6 112 40.2
TWI38G0070 Tripterygium wilfordii HOM05D000828 ORTHO05D000623 8.7e-11 71.2 176 31.2
GSVIVG01021229001 Vitis vinifera HOM05D000828 ORTHO05D000623 1.5e-10 70.5 170 30.6
Carub.0007s2257 Capsella rubella HOM05D000828 ORTHO05D000623 1.9e-10 70.1 166 30.7
TPR.G27338 Trifolium pratense HOM05D000828 ORTHO05D000623 3.3e-10 69.3 168 30.4
SalBow8G1411 Salvia bowleyana HOM05D000828 ORTHO05D000623 5.7e-10 68.6 170 32.4
VMungo0540G1747 Vigna mungo HOM05D000828 ORTHO05D000623 9.7e-10 67.8 168 29.2
Lalb_Chr18g0054581 Lupinus albus HOM05D000828 ORTHO05D000623 2.2e-09 66.6 139 34.5
AUR62031223 Chenopodium quinoa HOM05D000828 ORTHO05D000623 2.8e-09 66.2 129 34.9
ECA236G2252 Erigeron canadensis HOM05D000828 ORTHO05D000623 2.8e-09 66.2 165 30.3
Lj1P1191T47 Lonicera japonica HOM05D000828 ORTHO05D000623 3.7e-09 65.9 150 32.0
Ah.06g188610 Amaranthus hybridus HOM05D000828 ORTHO05D000623 6.3e-09 65.1 185 29.2
Nn1g04459 Nelumbo nucifera HOM05D000828 ORTHO05D000623 8.2e-09 64.7 171 30.4
HanXRQChr04g0116961 Helianthus annuus HOM05D000828 ORTHO05D000623 1.1e-08 64.3 110 39.1
Lj6g0001029 Lotus japonicus HOM05D000828 ORTHO05D000623 5.3e-08 62.0 111 39.6
SalBow7G2701 Salvia bowleyana HOM05D000828 ORTHO05D000623 5.3e-08 62.0 168 31.0
Hma1.2p1_0134F.1_g061590 Hydrangea macrophylla HOM05D000828 ORTHO05D000623 3.4e-07 59.3 190 25.8
PSO528G0190 Papaver somniferum HOM05D000828 ORTHO05D000623 3.4e-07 59.3 196 25.0
Phvul.002G275400 Phaseolus vulgaris HOM05D000828 ORTHO05D000623 1.0e-06 57.8 198 27.3
TWI31G1014 Tripterygium wilfordii HOM05D000828 ORTHO05D000623 2.2e-06 56.6 193 23.8
Gohir.A09G006200 Gossypium hirsutum HOM05D000828 ORTHO05D000623 3.8e-06 55.8 185 24.3
Aqoxy6G00246 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 5.0e-06 55.5 179 25.1
PGR102G0685 Punica granatum HOM05D000828 ORTHO05D000623 6.5e-06 55.1 189 25.9


User provided reference genes

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