Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g00165_MAGBIO Magnolia biondii HOM05D000267 ORTHO05D009944 7.9e-310 1066.2 525 100.0
TAR628G1652 Trochodendron aralioides HOM05D000267 ORTHO05D009944 2.1e-217 759.2 529 69.8
CSS0022193 Camellia sinensis var. sinensis HOM05D000267 ORTHO05D009944 1.5e-204 716.5 500 67.0
Prupe.8G168300 Prunus persica HOM05D000267 ORTHO05D009944 1.9e-202 709.5 500 69.0
QL11p051524 Quercus lobata HOM05D000267 ORTHO05D009944 2.7e-201 705.7 492 67.5
GSVIVG01023990001 Vitis vinifera HOM05D000267 ORTHO05D009944 5.7e-199 698.0 501 66.7
Actinidia18043 Actinidia chinensis HOM05D000267 ORTHO05D002764 5.3e-197 691.4 511 64.6
CiPaw.05G084800 Carya illinoinensis HOM05D000267 ORTHO05D009944 1.0e-195 687.2 561 62.0
Thecc.02G056000 Theobroma cacao HOM05D000267 ORTHO05D009944 1.7e-195 686.4 497 65.6
ATR0661G537 Amborella trichopoda HOM05D000267 ORTHO05D009944 5.0e-195 684.9 499 66.9
FvH4_2g15600 Fragaria vesca HOM05D000267 ORTHO05D009944 1.4e-194 683.3 497 67.6
EL10Ac9g21344 Beta vulgaris HOM05D000267 ORTHO05D009944 2.5e-194 682.6 503 64.2
TWI79G0018 Tripterygium wilfordii HOM05D000267 ORTHO05D009944 4.2e-194 681.8 531 63.5
FAN20G0365 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.2e-193 680.2 496 66.9
Sc14g0002320 Simmondsia chinensis HOM05D000267 ORTHO05D009944 3.0e-192 675.6 520 61.7
AagrBONN_evm.TU.Sc2ySwM_344.2069 Anthoceros agrestis HOM05D000267 ORTHO05D009944 3.3e-191 672.2 505 63.0
AUR62010015 Chenopodium quinoa HOM05D000267 ORTHO05D009944 7.4e-191 671.0 497 64.2
Atru.chr5.3400 Acer truncatum HOM05D000267 ORTHO05D009944 1.3e-190 670.2 492 65.9
AUR62013005 Chenopodium quinoa HOM05D000267 ORTHO05D009944 3.7e-190 668.7 530 61.5
Gorai.008G037400 Gossypium raimondii HOM05D000267 ORTHO05D009944 3.7e-190 668.7 491 65.4
Cfa005283 Carpinus fangiana HOM05D000267 ORTHO05D002764 8.2e-190 667.5 494 66.4
MD05G1124600 Malus domestica HOM05D000267 ORTHO05D009944 4.1e-189 665.2 498 65.7
Rhsim11G0193400 Rhododendron simsii HOM05D000267 ORTHO05D009944 1.2e-188 663.7 584 57.0
Manes.11G097600 Manihot esculenta HOM05D000267 ORTHO05D009944 2.6e-188 662.5 531 61.6
Gohir.D12G036200 Gossypium hirsutum HOM05D000267 ORTHO05D009944 2.2e-187 659.4 491 64.6
Migut.B00061 Erythranthe guttata HOM05D000267 ORTHO05D009944 2.9e-187 659.1 495 62.0
CsaV3_2G016240 Cucumis sativus L. HOM05D000267 ORTHO05D009944 6.5e-187 657.9 499 61.5
Potri.004G177400 Populus trichocarpa HOM05D000267 ORTHO05D009944 6.5e-187 657.9 497 62.6
COL.COLO4_17372 Corchorus olitorius HOM05D000267 ORTHO05D009944 8.5e-187 657.5 495 64.6
THA.LOC104807804 Tarenaya hassleriana HOM05D000267 ORTHO05D009944 8.5e-187 657.5 501 61.9
ClCG02G012080 Citrullus lanatus HOM05D000267 ORTHO05D009944 2.7e-185 652.5 526 59.7
FAN24G1303 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.8e-184 649.8 583 57.5
Dinv41920 Davidia involucrata HOM05D000267 ORTHO05D002764 3.9e-184 648.7 449 68.4
Pp3c3_37260 Physcomitrium patens HOM05D000267 ORTHO05D009944 3.9e-184 648.7 506 60.5
SMO367G0708 Selaginella moellendorffii HOM05D000267 ORTHO05D009944 3.9e-184 648.7 507 62.3
Mapoly0001s0154 Marchantia polymorpha HOM05D000267 ORTHO05D009944 1.1e-183 647.1 498 62.9
Duzib132G0985 Durio zibethinus HOM05D000267 ORTHO05D009944 1.5e-183 646.7 491 63.1
Cpa.g.sc20.108 Carica papaya HOM05D000267 ORTHO05D009944 5.3e-181 638.3 502 61.0
Eucgr.I01454 Eucalyptus grandis HOM05D000267 ORTHO05D009944 2.6e-180 636.0 501 61.7
vmacro02289 Vaccinium macrocarpon HOM05D000267 ORTHO05D009944 4.5e-180 635.2 458 64.8
AUR62015150 Chenopodium quinoa HOM05D000267 ORTHO05D009944 1.2e-177 627.1 497 61.0
Hma1.2p1_0163F.1_g072670 Hydrangea macrophylla HOM05D000267 ORTHO05D009944 3.6e-177 625.5 439 67.2
Cc09_g10270 Coffea canephora HOM05D000267 ORTHO05D009944 6.7e-176 621.3 500 60.4
FAN27G0796 Fragaria x ananassa HOM05D000267 ORTHO05D009944 2.6e-175 619.4 548 58.2
Nitab4.5_0000079g0250 Nicotiana tabacum HOM05D000267 ORTHO05D000298 3.1e-173 612.5 500 57.8
Sed0004064 Sechium edule HOM05D000267 ORTHO05D009944 3.8e-171 605.5 499 58.3
Os04g0560500 Oryza sativa ssp. japonica HOM05D000267 ORTHO05D009944 1.1e-170 604.0 532 54.7
CANSAT25G1222 Cannabis sativa HOM05D000267 ORTHO05D009944 4.2e-170 602.1 434 65.7
FAN15G3022 Fragaria x ananassa HOM05D000267 ORTHO05D009944 4.2e-170 602.1 513 61.6
Nn5g30837 Nelumbo nucifera HOM05D000267 ORTHO05D009944 7.0e-165 584.7 431 67.3
MELO3C020832.2 Cucumis melo HOM05D000267 ORTHO05D009944 2.7e-164 582.8 509 56.0
Nitab4.5_0007484g0010 Nicotiana tabacum HOM05D000267 ORTHO05D009944 3.2e-162 575.9 494 56.1
Ciclev10028457m.g Citrus clementina HOM05D000267 ORTHO05D009944 1.4e-157 560.5 407 65.8
Gohir.A12G036400 Gossypium hirsutum HOM05D000267 ORTHO05D009944 3.8e-155 552.4 414 62.8
SalBow1G0833 Salvia bowleyana HOM05D000267 ORTHO05D009944 9.4e-154 547.7 450 58.2
Haze_02110 Corylus avellana HOM05D000267 ORTHO05D009944 3.6e-153 545.8 493 58.0
Zm00001eb074100 Zea mays HOM05D000267 ORTHO05D009944 2.0e-151 540.0 496 52.4
Oeu015554.3 Olea europaea HOM05D000267 ORTHO05D002764 2.3e-136 490.0 526 49.8
Atru.chr5.3388 Acer truncatum HOM05D000267 ORTHO05D009944 9.5e-122 441.4 435 52.6
Pp3c21_13310 Physcomitrium patens HOM05D000267 ORTHO05D009944 3.2e-117 426.4 552 44.0
Ah.01g023200 Amaranthus hybridus HOM05D000267 ORTHO05D009944 4.4e-111 406.0 460 46.3
Cre13.g587500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 5.6e-106 389.0 531 41.8
RcHm_v2.0_Chr6g0278781 Rosa chinensis HOM05D000267 ORTHO05D009944 5.6e-106 389.0 278 66.9
HPP92_001748 Vanilla planifolia HOM05D000267 ORTHO05D009944 6.0e-92 342.4 312 54.8
Cre17.g719500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 8.4e-86 322.0 518 39.4
RcHm_v2.0_Chr6g0255801 Rosa chinensis HOM05D000267 ORTHO05D009944 2.1e-81 307.4 278 59.0
Atru.chr5.3392 Acer truncatum HOM05D000267 ORTHO05D009944 5.3e-80 302.8 305 50.5
Hund06449 Selenicereus undatus HOM05D000267 ORTHO05D009944 1.5e-79 301.2 210 67.6
RcHm_v2.0_Chr6g0278801 Rosa chinensis HOM05D000267 ORTHO05D009944 2.8e-73 280.4 186 69.9
MCO05G576 Micromonas commoda HOM05D000267 ORTHO05D009944 4.8e-73 279.6 498 37.6
Actinidia20524 Actinidia chinensis HOM05D000267 ORTHO05D002764 2.4e-72 277.3 427 42.4
Peaxi162Scf00078g01332 Petunia axillaris HOM05D000267 ORTHO05D009944 2.0e-71 274.2 199 63.3
AagrBONN_evm.TU.Sc2ySwM_228.1198 Anthoceros agrestis HOM05D000267 ORTHO05D009944 9.4e-69 265.4 367 42.2
MCO05G735 Micromonas commoda HOM05D000267 ORTHO05D009944 2.7e-60 237.3 540 33.5
PRCOL_00001600 Prasinoderma coloniale HOM05D000267 ORTHO05D009944 1.3e-54 218.4 539 32.3
SEGI_17018 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 7.5e-50 202.6 204 49.0
Peaxi162Scf00078g01331 Petunia axillaris HOM05D000267 ORTHO05D009944 1.2e-47 195.3 125 72.8
Sabra04G0119300 Salix brachista HOM05D000267 ORTHO05D009944 2.8e-41 174.1 187 47.1
SEGI_10216 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 5.4e-40 169.9 249 38.6
HPP92_001749 Vanilla planifolia HOM05D000267 ORTHO05D009944 1.0e-27 129.0 85 68.2
MCO15G399 Micromonas commoda HOM05D002360 ORTHO05D006971 4.9e-25 120.2 481 24.5
RcHm_v2.0_Chr6g0255791 Rosa chinensis HOM05D000267 ORTHO05D009944 5.0e-22 110.2 96 56.2
PRCOL_00001572 Prasinoderma coloniale HOM05D002360 ORTHO05D006971 6.6e-22 109.8 485 23.1
Lj9A400T56 Lonicera japonica HOM05D000267 ORTHO05D009944 3.3e-21 107.5 74 64.9
SEGI_00421 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 1.1e-19 102.4 166 35.5
CARHR111810 Cardamine hirsuta HOM05D000267 ORTHO05D009944 1.8e-19 101.7 88 52.3
SEGI_37732 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 1.3e-17 95.5 94 48.9
Thecc.02G059600 Theobroma cacao HOM05D000267 ORTHO05D009944 4.3e-13 80.5 96 43.8
RcHm_v2.0_Chr2g0123001 Rosa chinensis HOM05D000267 ORTHO05D009944 5.6e-13 80.1 68 57.4
CBR_g29276 Chara braunii HOM05D002360 ORTHO05D000002 1.2e-10 72.4 370 23.2


User provided reference genes

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