Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g47462_MAGBIO Magnolia biondii HOM05D003413 ORTHO05D004197 7.7e-61 236.9 114 100.0
MBI04_g08407_MAGBIO Magnolia biondii HOM05D003413 ORTHO05D004197 2.8e-26 122.1 106 61.3
CiPaw.06G100800 Carya illinoinensis HOM05D003413 ORTHO05D004197 1.5e-24 116.3 120 55.8
Cfa009337 Carpinus fangiana HOM05D003413 ORTHO05D004197 3.4e-24 115.2 120 55.8
Cfa020602 Carpinus fangiana HOM05D003413 ORTHO05D004197 3.4e-24 115.2 120 55.8
Haze_12385 Corylus avellana HOM05D003413 ORTHO05D004197 3.4e-24 115.2 120 55.8
Cpa.g.sc43.24 Carica papaya HOM05D003413 ORTHO05D004197 4.4e-24 114.8 120 55.0
CsaV3_5G030400 Cucumis sativus L. HOM05D003413 ORTHO05D004197 4.4e-24 114.8 113 59.3
Sabra08G0134800 Salix brachista HOM05D003413 ORTHO05D004197 4.4e-24 114.8 112 58.9
HPP92_020236 Vanilla planifolia HOM05D003413 ORTHO05D004197 4.4e-24 114.8 113 59.3
ClCG11G013810 Citrullus lanatus HOM05D003413 ORTHO05D004197 5.8e-24 114.4 119 55.5
Manes.13G017700 Manihot esculenta HOM05D003413 ORTHO05D004197 5.8e-24 114.4 120 55.0
Manes.12G013500 Manihot esculenta HOM05D003413 ORTHO05D004197 7.6e-24 114.0 120 54.2
GSVIVG01010375001 Vitis vinifera HOM05D003413 ORTHO05D004197 7.6e-24 114.0 120 55.0
Lalb_Chr12g0202151 Lupinus albus HOM05D003413 ORTHO05D004197 9.9e-24 113.6 120 54.2
PSO063G0094 Papaver somniferum HOM05D003413 ORTHO05D004197 9.9e-24 113.6 120 54.2
Sed0004676 Sechium edule HOM05D003413 ORTHO05D004197 9.9e-24 113.6 120 55.0
Hund21776 Selenicereus undatus HOM05D003413 ORTHO05D004197 9.9e-24 113.6 113 56.6
TAR629G2699 Trochodendron aralioides HOM05D003413 ORTHO05D004197 9.9e-24 113.6 120 55.0
ATR1120G105 Amborella trichopoda HOM05D003413 ORTHO05D004197 1.3e-23 113.2 114 57.9
Oeu020301.1 Olea europaea HOM05D003413 ORTHO05D004197 1.3e-23 113.2 133 51.9
Potri.008G177000 Populus trichocarpa HOM05D003413 ORTHO05D004197 1.3e-23 113.2 112 58.0
QL04p035333 Quercus lobata HOM05D003413 ORTHO05D004197 1.3e-23 113.2 120 55.0
Sed0019386 Sechium edule HOM05D003413 ORTHO05D004197 1.3e-23 113.2 113 58.4
CiPaw.05G112700 Carya illinoinensis HOM05D003413 ORTHO05D004197 1.7e-23 112.8 120 54.2
ClCG08G010150 Citrullus lanatus HOM05D003413 ORTHO05D004197 1.7e-23 112.8 120 54.2
Aqoxy5G03439 Aquilegia oxysepala HOM05D003413 ORTHO05D004197 2.2e-23 112.5 120 55.0
MELO3C011449.2 Cucumis melo HOM05D003413 ORTHO05D004197 2.2e-23 112.5 150 46.0
CsaV3_6G032330 Cucumis sativus L. HOM05D003413 ORTHO05D004197 2.2e-23 112.5 120 54.2
DCAR_026471 Daucus carota HOM05D003413 ORTHO05D004197 2.2e-23 112.5 120 55.0
Glyma.04G194700 Glycine max HOM05D003413 ORTHO05D004197 2.2e-23 112.5 120 54.2
Glyma.06G171200 Glycine max HOM05D003413 ORTHO05D004197 2.2e-23 112.5 120 54.2
Lalb_Chr07g0183311 Lupinus albus HOM05D003413 ORTHO05D004197 2.2e-23 112.5 120 54.2
Phvul.009G167300 Phaseolus vulgaris HOM05D003413 ORTHO05D004197 2.2e-23 112.5 120 54.2
Pp3c11_2970 Physcomitrium patens HOM05D003413 ORTHO05D004197 2.2e-23 112.5 120 51.7
Gohir.A01G160500 Gossypium hirsutum HOM05D003413 ORTHO05D004197 2.9e-23 112.1 120 54.2
Gohir.D01G155200 Gossypium hirsutum HOM05D003413 ORTHO05D004197 2.9e-23 112.1 120 54.2
Gorai.002G192400 Gossypium raimondii HOM05D003413 ORTHO05D004197 2.9e-23 112.1 120 54.2
Thecc.02G276700 Theobroma cacao HOM05D003413 ORTHO05D004197 2.9e-23 112.1 120 54.2
VMungo1309G0564 Vigna mungo HOM05D003413 ORTHO05D004197 2.9e-23 112.1 120 54.2
Migut.E00028 Erythranthe guttata HOM05D003413 ORTHO05D004197 3.8e-23 111.7 118 52.5
PSO782G4279 Papaver somniferum HOM05D003413 ORTHO05D004197 3.8e-23 111.7 120 53.3
Ah.03g136290 Amaranthus hybridus HOM05D003413 ORTHO05D004197 4.9e-23 111.3 115 56.5
CANSAT01G2316 Cannabis sativa HOM05D003413 ORTHO05D004197 4.9e-23 111.3 120 54.2
Duzib268G0982 Durio zibethinus HOM05D003413 ORTHO05D004197 4.9e-23 111.3 120 53.3
Thhalv10004762m.g Eutrema salsugineum HOM05D003413 ORTHO05D004197 4.9e-23 111.3 128 53.1
Sc01g0009880 Simmondsia chinensis HOM05D003413 ORTHO05D004197 4.9e-23 111.3 112 57.1
TWI18G0413 Tripterygium wilfordii HOM05D003413 ORTHO05D004197 4.9e-23 111.3 120 54.2
arahy.Tifrunner.gnm1.ann1.R6HZSL Arachis hypogaea HOM05D003413 ORTHO05D004197 6.4e-23 110.9 119 52.1
Nn3g16510 Nelumbo nucifera HOM05D003413 ORTHO05D004197 6.4e-23 110.9 112 58.0
CSS0015662 Camellia sinensis var. sinensis HOM05D003413 ORTHO05D004197 8.4e-23 110.5 120 54.2
Dinv14816 Davidia involucrata HOM05D003413 ORTHO05D004197 8.4e-23 110.5 111 57.7
Nitab4.5_0004212g0060 Nicotiana tabacum HOM05D003413 ORTHO05D004197 8.4e-23 110.5 118 53.4
Peaxi162Scf00858g00310 Petunia axillaris HOM05D003413 ORTHO05D004197 8.4e-23 110.5 120 54.2
Prupe.1G229300 Prunus persica HOM05D003413 ORTHO05D004197 8.4e-23 110.5 120 54.2
Hund25449 Selenicereus undatus HOM05D003413 ORTHO05D004197 8.4e-23 110.5 113 55.8
TWI36G0673 Tripterygium wilfordii HOM05D003413 ORTHO05D004197 8.4e-23 110.5 112 58.0
Atru.chr11.2293 Acer truncatum HOM05D003413 ORTHO05D004197 1.1e-22 110.2 118 51.7
Lj1g0010419 Lotus japonicus HOM05D003413 ORTHO05D004197 1.1e-22 110.2 120 54.2
Mapoly0021s0078 Marchantia polymorpha HOM05D003413 ORTHO05D004197 1.1e-22 110.2 120 50.8
SGA_v2.0_scaffold87G27141 Striga asiatica HOM05D003413 ORTHO05D004197 1.1e-22 110.2 113 55.8
Actinidia30663 Actinidia chinensis HOM05D003413 ORTHO05D004197 1.4e-22 109.8 119 54.6
BcaB08g34231 Brassica carinata HOM05D003413 ORTHO05D004197 1.4e-22 109.8 129 51.9
BcaC05g25088 Brassica carinata HOM05D003413 ORTHO05D004197 1.4e-22 109.8 129 51.9
A06p08660 Brassica napus HOM05D003413 ORTHO05D004197 1.4e-22 109.8 129 51.9
C05p10270 Brassica napus HOM05D003413 ORTHO05D004197 1.4e-22 109.8 115 53.9
BolC5t29773H Brassica oleracea HOM05D003413 ORTHO05D004197 1.4e-22 109.8 115 53.9
AUR62005593 Chenopodium quinoa HOM05D003413 ORTHO05D004197 1.4e-22 109.8 120 53.3
AUR62024135 Chenopodium quinoa HOM05D003413 ORTHO05D004197 1.4e-22 109.8 120 53.3
Duzib251G0571 Durio zibethinus HOM05D003413 ORTHO05D004197 1.4e-22 109.8 120 52.5
Gohir.D04G181800 Gossypium hirsutum HOM05D003413 ORTHO05D004197 1.4e-22 109.8 120 52.5
Gorai.012G175200 Gossypium raimondii HOM05D003413 ORTHO05D004197 1.4e-22 109.8 120 52.5
Nitab4.5_0000582g0200 Nicotiana tabacum HOM05D003413 ORTHO05D004197 1.4e-22 109.8 120 54.2
Sp1g11610 Schrenkiella parvula HOM05D003413 ORTHO05D004197 1.4e-22 109.8 128 52.3
SGA_v2.0_scaffold96G29099 Striga asiatica HOM05D003413 ORTHO05D004197 1.4e-22 109.8 110 56.4
BcaNung06606 Brassica carinata HOM05D003413 ORTHO05D004197 1.9e-22 109.4 128 52.3
MD10G1030600 Malus domestica HOM05D003413 ORTHO05D004197 1.9e-22 109.4 113 57.5
Potri.010G058100 Populus trichocarpa HOM05D003413 ORTHO05D004197 1.9e-22 109.4 114 56.1
arahy.Tifrunner.gnm1.ann1.3BP915 Arachis hypogaea HOM05D001045 ORTHO05D004836 2.4e-22 109.0 119 51.3
arahy.Tifrunner.gnm1.ann1.DD2PIM Arachis hypogaea HOM05D003413 ORTHO05D004197 2.4e-22 109.0 119 51.3
Carub.0001s1281 Capsella rubella HOM05D003413 ORTHO05D004197 2.4e-22 109.0 116 55.2
CARHR013390 Cardamine hirsuta HOM05D003413 ORTHO05D004197 2.4e-22 109.0 129 51.2
Dinv10975 Davidia involucrata HOM05D003413 ORTHO05D004197 2.4e-22 109.0 110 56.4
Eucgr.H04655 Eucalyptus grandis HOM05D003413 ORTHO05D004197 2.4e-22 109.0 120 53.3
FAN12G0555 Fragaria x ananassa HOM05D003413 ORTHO05D004197 2.4e-22 109.0 112 57.1
THA.LOC104814351 Tarenaya hassleriana HOM05D003413 ORTHO05D004197 2.4e-22 109.0 112 56.2
A08p32480 Brassica napus HOM05D003413 ORTHO05D004197 3.2e-22 108.6 125 52.8
C08p15800 Brassica napus HOM05D003413 ORTHO05D004197 3.2e-22 108.6 125 52.8
BolC8t49206H Brassica oleracea HOM05D003413 ORTHO05D004197 3.2e-22 108.6 125 52.8
BraA08t35172Z Brassica rapa HOM05D003413 ORTHO05D004197 3.2e-22 108.6 125 52.8
Thhalv10008454m.g Eutrema salsugineum HOM05D003413 ORTHO05D004197 3.2e-22 108.6 115 55.7
FAN17G2448 Fragaria x ananassa HOM05D003413 ORTHO05D004197 3.2e-22 108.6 112 57.1
FAN22G2268 Fragaria x ananassa HOM05D003413 ORTHO05D004197 3.2e-22 108.6 112 57.1
Psat0s14g0120 Pisum sativum HOM05D003413 ORTHO05D004197 3.2e-22 108.6 120 53.3
PGR119G0878 Punica granatum HOM05D003413 ORTHO05D004197 3.2e-22 108.6 120 52.5
Sp2g15490 Schrenkiella parvula HOM05D003413 ORTHO05D004197 3.2e-22 108.6 128 52.3
THA.LOC104812691 Tarenaya hassleriana HOM05D003413 ORTHO05D004197 3.2e-22 108.6 112 56.2
Actinidia08079 Actinidia chinensis HOM05D003413 ORTHO05D004197 4.2e-22 108.2 112 57.1
AL5G15110 Arabidopsis lyrata HOM05D003413 ORTHO05D004197 4.2e-22 108.2 125 52.8
Carub.0005s0426 Capsella rubella HOM05D003413 ORTHO05D004197 4.2e-22 108.2 125 52.8
CARHR147350 Cardamine hirsuta HOM05D003413 ORTHO05D004197 4.2e-22 108.2 129 51.2
Ca_24508_v3 Cicer arietinum L. HOM05D003413 ORTHO05D004197 4.2e-22 108.2 120 53.3
COL.COLO4_20354 Corchorus olitorius HOM05D003413 ORTHO05D004197 4.2e-22 108.2 118 51.7
Oeu049152.1 Olea europaea HOM05D003413 ORTHO05D004197 4.2e-22 108.2 112 57.1
Oeu056675.1 Olea europaea HOM05D003413 ORTHO05D004197 4.2e-22 108.2 112 57.1
BraA06t24062Z Brassica rapa HOM05D003413 ORTHO05D004197 5.4e-22 107.8 114 53.5
CAN.G694.91 Capsicum annuum HOM05D003413 ORTHO05D004197 5.4e-22 107.8 120 53.3
Lalb_Chr06g0172271 Lupinus albus HOM05D003413 ORTHO05D004197 5.4e-22 107.8 118 52.5
RcHm_v2.0_Chr4g0430701 Rosa chinensis HOM05D003413 ORTHO05D004197 5.4e-22 107.8 112 57.1
Sed0010714 Sechium edule HOM05D003413 ORTHO05D004197 5.4e-22 107.8 112 56.2
AL1G24710 Arabidopsis lyrata HOM05D003413 ORTHO05D004197 7.1e-22 107.5 116 54.3
C08p46910 Brassica napus HOM05D003413 ORTHO05D004197 7.1e-22 107.5 129 51.2
BolC8t52226H Brassica oleracea HOM05D003413 ORTHO05D004197 7.1e-22 107.5 129 51.2
BraA09t41695Z Brassica rapa HOM05D003413 ORTHO05D004197 7.1e-22 107.5 129 51.2
MD16G1116800 Malus domestica HOM05D003413 ORTHO05D004197 7.1e-22 107.5 120 53.3
QL03p054247 Quercus lobata HOM05D003413 ORTHO05D004197 7.1e-22 107.5 114 55.3
Rhsim12G0102400 Rhododendron simsii HOM05D003413 ORTHO05D004197 7.1e-22 107.5 140 43.6
SalBow1G2866 Salvia bowleyana HOM05D003413 ORTHO05D004197 7.1e-22 107.5 110 55.5
Solyc05g056160.3 Solanum lycopersicum HOM05D003413 ORTHO05D004197 7.1e-22 107.5 120 53.3
Sopen05g034570 Solanum pennellii HOM05D003413 ORTHO05D004197 7.1e-22 107.5 120 53.3
PGSC0003DMG400023337 Solanum tuberosum HOM05D003413 ORTHO05D004197 7.1e-22 107.5 120 53.3
Actinidia09660 Actinidia chinensis HOM05D003413 ORTHO05D004197 9.3e-22 107.1 119 52.1
HanXRQChr12g0372411 Helianthus annuus HOM05D003413 ORTHO05D004197 9.3e-22 107.1 120 52.5
Hma1.2p1_0458F.1_g157100 Hydrangea macrophylla HOM05D003413 ORTHO05D004197 9.3e-22 107.1 125 50.4
Sabra10G0047300 Salix brachista HOM05D003413 ORTHO05D004197 9.3e-22 107.1 115 53.0
AagrBONN_evm.TU.Sc2ySwM_117.841 Anthoceros agrestis HOM05D003413 ORTHO05D004197 1.2e-21 106.7 119 50.4
AT1G13060 Arabidopsis thaliana HOM05D003413 ORTHO05D004197 1.2e-21 106.7 115 54.8
Cc11_g16770 Coffea canephora HOM05D003413 ORTHO05D004197 1.2e-21 106.7 110 54.5
ECA233G4198 Erigeron canadensis HOM05D003413 ORTHO05D004197 1.2e-21 106.7 112 56.2
HanXRQChr08g0207581 Helianthus annuus HOM05D003413 ORTHO05D004197 1.2e-21 106.7 120 52.5
Lsat_1_v5_gn_8_149501 Lactuca sativa HOM05D003413 ORTHO05D004197 1.2e-21 106.7 120 52.5
Medtr3g089040 Medicago truncatula HOM05D003413 ORTHO05D004197 1.2e-21 106.7 120 52.5
Aa31LG1G1740 Aethionema arabicum HOM05D003413 ORTHO05D004197 1.6e-21 106.3 125 52.0
Nitab4.5_0000071g0160 Nicotiana tabacum HOM05D003413 ORTHO05D004197 1.6e-21 106.3 110 54.5
Nitab4.5_0012482g0010 Nicotiana tabacum HOM05D003413 ORTHO05D004197 1.6e-21 106.3 110 54.5
AT3G26340 Arabidopsis thaliana HOM05D003413 ORTHO05D004197 2.1e-21 105.9 125 52.0
Gohir.A04G138900 Gossypium hirsutum HOM05D003413 ORTHO05D004197 2.1e-21 105.9 120 51.7
Lj3C1066T5 Lonicera japonica HOM05D003413 ORTHO05D004197 2.1e-21 105.9 112 55.4
Sopen03g016110 Solanum pennellii HOM05D003413 ORTHO05D004197 2.1e-21 105.9 118 50.8
Aa31LG2G6170 Aethionema arabicum HOM05D003413 ORTHO05D004197 2.7e-21 105.5 110 54.5
Os06g0153800 Oryza sativa ssp. japonica HOM05D003413 ORTHO05D004197 2.7e-21 105.5 114 51.8
Rhsim12G0028500 Rhododendron simsii HOM05D003413 ORTHO05D004197 2.7e-21 105.5 112 56.2
vmacro20451 Vaccinium macrocarpon HOM05D003413 ORTHO05D004197 2.7e-21 105.5 112 56.2
CSS0027762 Camellia sinensis var. sinensis HOM05D003413 ORTHO05D004197 3.5e-21 105.1 112 55.4
unitig_52.g17190 Utricularia gibba HOM05D003413 ORTHO05D004197 4.6e-21 104.8 110 52.7
Zm00001eb376670 Zea mays HOM05D003413 ORTHO05D004197 4.6e-21 104.8 112 54.5
MSTRG.2454 Avicennia marina HOM05D003413 ORTHO05D004197 6.0e-21 104.4 110 54.5
A09p63450 Brassica napus HOM05D003413 ORTHO05D004197 6.0e-21 104.4 129 50.4
Lj6A824T74 Lonicera japonica HOM05D003413 ORTHO05D004197 6.0e-21 104.4 110 52.7
vmacro01074 Vaccinium macrocarpon HOM05D003413 ORTHO05D004197 6.0e-21 104.4 119 52.1
ECA246G0095 Erigeron canadensis HOM05D003413 ORTHO05D004197 1.0e-20 103.6 112 55.4
EL10Ac6g13472 Beta vulgaris HOM05D003413 ORTHO05D004197 1.3e-20 103.2 121 52.1
unitig_62.g23655 Utricularia gibba HOM05D003413 ORTHO05D004197 1.7e-20 102.8 110 51.8
MELO3C011880.2 Cucumis melo HOM05D003413 ORTHO05D004197 1.5e-19 99.8 104 53.8
CBR_g34466 Chara braunii HOM05D003413 ORTHO05D004197 1.9e-19 99.4 112 50.0
CBR_g23349 Chara braunii HOM05D003413 ORTHO05D004197 5.6e-19 97.8 111 49.5
SMO147G0030 Selaginella moellendorffii HOM05D003413 ORTHO05D004197 9.6e-19 97.1 110 50.0
TPR.G26137 Trifolium pratense HOM05D003413 ORTHO05D004197 6.2e-18 94.4 99 53.5
Psat6g126800 Pisum sativum HOM05D003413 ORTHO05D004197 1.4e-17 93.2 106 49.1
Psat6g126880 Pisum sativum HOM05D003413 ORTHO05D004197 1.8e-17 92.8 112 48.2
Pp3c7_21050 Physcomitrium patens HOM05D003413 ORTHO05D004197 2.4e-17 92.4 151 38.4
Solyc03g063420.2 Solanum lycopersicum HOM05D003413 ORTHO05D004197 1.2e-16 90.1 139 42.4
CDE07G0715 Ceratophyllum demersum HOM05D003413 ORTHO05D004197 2.0e-16 89.4 107 50.5
MCO06G264 Micromonas commoda HOM05D003413 ORTHO05D004197 5.8e-16 87.8 111 45.9
Cre10.g461950 Chlamydomonas reinhardtii HOM05D003413 ORTHO05D004197 4.9e-15 84.7 112 46.4
DCAR_026523 Daucus carota HOM05D003413 ORTHO05D004197 8.4e-15 84.0 105 49.5
FvH4_4g24020 Fragaria vesca HOM05D003413 ORTHO05D004197 7.1e-14 80.9 38 97.4
PRCOL_00003194 Prasinoderma coloniale HOM05D003413 ORTHO05D004197 2.7e-13 79.0 109 41.3
A03p26430 Brassica napus HOM05D003413 ORTHO05D004197 6.7e-12 74.3 38 89.5
BraA01t00949Z Brassica rapa HOM05D003413 ORTHO05D004197 6.7e-12 74.3 38 89.5
BraA03t11858Z Brassica rapa HOM05D003413 ORTHO05D004197 6.7e-12 74.3 38 89.5
Ciclev10032238m.g Citrus clementina HOM05D003413 ORTHO05D004197 7.4e-11 70.9 123 38.2
Peaxi162Scf01227g00031 Petunia axillaris HOM05D003413 ORTHO05D004197 7.4e-11 70.9 105 43.8
FAN12G2439 Fragaria x ananassa HOM05D003413 ORTHO05D004197 1.1e-06 57.0 24 91.7
Hma1.2p1_0022F.1_g014650 Hydrangea macrophylla HOM05D000282 ORTHO05D000272 9.3e-06 53.9 29 86.2
Hma1.2p1_0022F.1_g014665 Hydrangea macrophylla HOM05D000282 ORTHO05D000272 9.3e-06 53.9 29 86.2
Hma1.2p1_0531F.1_g173410 Hydrangea macrophylla HOM05D003413 ORTHO05D004197 9.3e-06 53.9 90 38.9


User provided reference genes

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