Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g47116_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 2.2e-137 492.3 243 100.0
MBI04_g28752_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 2.2e-41 173.3 315 42.5
Nn6g33390 Nelumbo nucifera HOM05D001925 ORTHO05D005701 4.4e-21 105.9 176 38.6
TAR636G2317 Trochodendron aralioides HOM05D001925 ORTHO05D005701 9.8e-21 104.8 176 38.6
GSVIVG01008477001 Vitis vinifera HOM05D001925 ORTHO05D005701 8.3e-20 101.7 239 32.2
Aqoxy2G04021 Aquilegia oxysepala HOM05D001925 ORTHO05D005701 1.1e-19 101.3 268 33.6
MD01G1065000 Malus domestica HOM05D001925 ORTHO05D005701 4.1e-19 99.4 222 34.2
Ciclev10019660m.g Citrus clementina HOM05D001925 ORTHO05D005701 5.4e-19 99.0 176 37.5
CANSAT56G3724 Cannabis sativa HOM05D001925 ORTHO05D005701 7.0e-19 98.6 109 50.5
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 7.0e-19 98.6 161 40.4
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 7.0e-19 98.6 186 34.9
Lj7A511T78 Lonicera japonica HOM05D001925 ORTHO05D005701 1.2e-18 97.8 210 35.2
Oeu015817.1 Olea europaea HOM05D001925 ORTHO05D005701 1.2e-18 97.8 247 31.6
arahy.Tifrunner.gnm1.ann1.69YTHK Arachis hypogaea HOM05D001925 ORTHO05D005701 1.6e-18 97.4 114 47.4
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 1.6e-18 97.4 161 40.4
SalBow3G0216 Salvia bowleyana HOM05D001925 ORTHO05D005701 1.6e-18 97.4 171 36.8
QL04p053597 Quercus lobata HOM05D001925 ORTHO05D005701 2.0e-18 97.1 282 31.2
Lj1g0000866 Lotus japonicus HOM05D001925 ORTHO05D005701 2.7e-18 96.7 158 39.2
Nitab4.5_0006018g0050 Nicotiana tabacum HOM05D001925 ORTHO05D005701 2.7e-18 96.7 162 39.5
FAN10G3665 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.5e-18 96.3 109 45.0
Atru.chr5.509 Acer truncatum HOM05D001925 ORTHO05D005701 5.9e-18 95.5 179 37.4
FAN03G1293 Fragaria x ananassa HOM05D001925 ORTHO05D005701 5.9e-18 95.5 109 45.9
Sed0000605 Sechium edule HOM05D001925 ORTHO05D005701 5.9e-18 95.5 235 31.5
CDE08G0676 Ceratophyllum demersum HOM05D001925 ORTHO05D005701 7.8e-18 95.1 109 48.6
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 7.8e-18 95.1 161 40.4
FvH4_7g14490 Fragaria vesca HOM05D001925 ORTHO05D005701 7.8e-18 95.1 109 45.0
FAN06G1763 Fragaria x ananassa HOM05D001925 ORTHO05D005701 7.8e-18 95.1 109 45.0
Sopen01g038540 Solanum pennellii HOM05D001925 ORTHO05D005701 7.8e-18 95.1 171 35.7
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.0e-17 94.7 109 45.0
Cpa.g.sc11.17 Carica papaya HOM05D001925 ORTHO05D005701 1.3e-17 94.4 162 40.7
TWI73G0882 Tripterygium wilfordii HOM05D001925 ORTHO05D005701 1.3e-17 94.4 176 33.0
CiPaw.01G062800 Carya illinoinensis HOM05D001925 ORTHO05D005701 1.7e-17 94.0 287 30.0
SGA_v2.0_scaffold4G02302 Striga asiatica HOM05D001925 ORTHO05D005701 1.7e-17 94.0 171 36.3
MELO3C021204.2 Cucumis melo HOM05D001925 ORTHO05D005701 2.3e-17 93.6 218 33.5
FAN10G1478 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.3e-17 93.6 111 45.9
PGR004G0833 Punica granatum HOM05D001925 ORTHO05D005701 2.3e-17 93.6 161 41.0
RcHm_v2.0_Chr1g0355901 Rosa chinensis HOM05D001925 ORTHO05D005701 2.3e-17 93.6 218 33.0
Peaxi162Scf00020g00723 Petunia axillaris HOM05D001925 ORTHO05D005701 2.9e-17 93.2 166 39.2
Prupe.2G172000 Prunus persica HOM05D001925 ORTHO05D005701 2.9e-17 93.2 170 35.3
PGSC0003DMG400000174 Solanum tuberosum HOM05D001925 ORTHO05D005701 2.9e-17 93.2 171 35.1
Migut.B01766 Erythranthe guttata HOM05D001925 ORTHO05D005701 3.9e-17 92.8 282 30.5
FAN06G3551 Fragaria x ananassa HOM05D001925 ORTHO05D005701 5.0e-17 92.4 109 44.0
CARHR237820 Cardamine hirsuta HOM05D001925 ORTHO05D005701 6.6e-17 92.0 152 36.8
CsaV3_6G000620 Cucumis sativus L. HOM05D001925 ORTHO05D005701 6.6e-17 92.0 235 32.3
Eucgr.D01236 Eucalyptus grandis HOM05D001925 ORTHO05D005701 6.6e-17 92.0 200 34.5
Solyc01g094760.3 Solanum lycopersicum HOM05D001925 ORTHO05D005701 6.6e-17 92.0 293 29.4
CAN.G78.90 Capsicum annuum HOM05D001925 ORTHO05D005701 8.6e-17 91.7 171 35.1
Cc02_g38160 Coffea canephora HOM05D001925 ORTHO05D005701 1.1e-16 91.3 161 36.6
Lalb_Chr13g0304081 Lupinus albus HOM05D001925 ORTHO05D005701 1.1e-16 91.3 111 47.7
Rhsim07G0013900 Rhododendron simsii HOM05D001925 ORTHO05D005701 1.9e-16 90.5 174 35.6
DCAR_007446 Daucus carota HOM05D001925 ORTHO05D005701 2.5e-16 90.1 169 33.7
THA.LOC104825846 Tarenaya hassleriana HOM05D001925 ORTHO05D005701 2.5e-16 90.1 224 31.7
Aa31LG2G20640 Aethionema arabicum HOM05D001925 ORTHO05D005701 4.3e-16 89.4 159 36.5
AL7G22330 Arabidopsis lyrata HOM05D001925 ORTHO05D005701 4.3e-16 89.4 176 32.4
Eucgr.L01587 Eucalyptus grandis HOM05D001925 ORTHO05D005701 4.3e-16 89.4 173 35.8
arahy.Tifrunner.gnm1.ann1.9GVB5D Arachis hypogaea HOM05D001925 ORTHO05D005701 5.6e-16 89.0 164 37.2
CSS0009302 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 7.3e-16 88.6 227 31.7
CSS0022743 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 7.3e-16 88.6 227 31.7
Glyma.18G234000 Glycine max HOM05D001925 ORTHO05D005701 7.3e-16 88.6 113 42.5
Nitab4.5_0000583g0200 Nicotiana tabacum HOM05D001925 ORTHO05D005701 7.3e-16 88.6 162 37.0
Duzib138G1334 Durio zibethinus HOM05D001925 ORTHO05D005701 9.5e-16 88.2 164 36.0
Thhalv10005869m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 9.5e-16 88.2 162 36.4
RcHm_v2.0_Chr2g0161261 Rosa chinensis HOM05D001925 ORTHO05D005701 9.5e-16 88.2 108 43.5
Sp5g05460 Schrenkiella parvula HOM05D001925 ORTHO05D005701 1.6e-15 87.4 160 36.9
vmacro13268 Vaccinium macrocarpon HOM05D001925 ORTHO05D005701 1.6e-15 87.4 114 43.9
Lj6A578T43 Lonicera japonica HOM05D001925 ORTHO05D005701 2.1e-15 87.0 290 29.0
arahy.Tifrunner.gnm1.ann1.NC5V2N Arachis hypogaea HOM05D001925 ORTHO05D005701 2.8e-15 86.7 163 36.8
ClCG06G003620 Citrullus lanatus HOM05D001925 ORTHO05D005701 2.8e-15 86.7 187 33.2
Lj6A572T62 Lonicera japonica HOM05D001925 ORTHO05D005701 3.6e-15 86.3 290 29.0
Actinidia10039 Actinidia chinensis HOM05D001925 ORTHO05D005701 4.7e-15 85.9 177 31.6
Lsat_1_v5_gn_7_4881 Lactuca sativa HOM05D001925 ORTHO05D005701 4.7e-15 85.9 276 28.6
Gohir.A11G089700 Gossypium hirsutum HOM05D001925 ORTHO05D005701 6.1e-15 85.5 164 34.8
Potri.001G135975 Populus trichocarpa HOM05D001925 ORTHO05D005701 6.1e-15 85.5 112 43.8
Ca_07928_v3 Cicer arietinum L. HOM05D001925 ORTHO05D005701 8.0e-15 85.1 115 41.7
Gorai.007G100400 Gossypium raimondii HOM05D001925 ORTHO05D005701 8.0e-15 85.1 161 36.6
Psat4g001160 Pisum sativum HOM05D001925 ORTHO05D005701 8.0e-15 85.1 114 43.0
Potri.014G085900 Populus trichocarpa HOM05D001925 ORTHO05D005701 8.0e-15 85.1 175 33.7
Thecc.01G357800 Theobroma cacao HOM05D001925 ORTHO05D005701 1.0e-14 84.7 162 38.3
Manes.05G033300 Manihot esculenta HOM05D001925 ORTHO05D005701 1.4e-14 84.3 174 33.9
Medtr7g077840 Medicago truncatula HOM05D001925 ORTHO05D005701 1.8e-14 84.0 118 41.5
Sabra14G0062200 Salix brachista HOM05D001925 ORTHO05D005701 1.8e-14 84.0 171 33.9
BcaB02g07621 Brassica carinata HOM05D001925 ORTHO05D005701 4.0e-14 82.8 155 34.8
BcaB02g07622 Brassica carinata HOM05D001925 ORTHO05D005701 4.0e-14 82.8 155 34.8
Sc01g0003490 Simmondsia chinensis HOM05D001925 ORTHO05D005701 4.0e-14 82.8 197 31.0
Phvul.008G061800 Phaseolus vulgaris HOM05D001925 ORTHO05D005701 5.2e-14 82.4 226 32.3
ATR0068G004 Amborella trichopoda HOM05D001925 ORTHO05D005701 8.9e-14 81.6 268 27.2
AT4G29910 Arabidopsis thaliana HOM05D001925 ORTHO05D005701 1.5e-13 80.9 114 39.5
BolC6t37570H Brassica oleracea HOM05D001925 ORTHO05D005701 2.0e-13 80.5 192 32.8
A07p23240 Brassica napus HOM05D001925 ORTHO05D005701 2.6e-13 80.1 192 31.8
C06p24120 Brassica napus HOM05D001925 ORTHO05D005701 2.6e-13 80.1 192 32.3
VMungo1383G1901 Vigna mungo HOM05D001925 ORTHO05D005701 2.6e-13 80.1 114 42.1
BcaC08g44822 Brassica carinata HOM05D001925 ORTHO05D005701 4.4e-13 79.3 192 32.3
Gohir.D11G094000 Gossypium hirsutum HOM05D001925 ORTHO05D005701 4.4e-13 79.3 161 36.0
BraA07t29988Z Brassica rapa HOM05D001925 ORTHO05D005701 1.7e-12 77.4 192 31.8
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 3.7e-12 76.3 162 32.7
ECA236G3836 Erigeron canadensis HOM05D001925 ORTHO05D005701 6.4e-12 75.5 237 29.1
HanXRQChr04g0121151 Helianthus annuus HOM05D001925 ORTHO05D005701 8.3e-12 75.1 282 27.0
AUR62004371 Chenopodium quinoa HOM05D001925 ORTHO05D005701 1.4e-11 74.3 165 31.5
Hund16654 Selenicereus undatus HOM05D001925 ORTHO05D005701 1.9e-11 73.9 109 38.5
Mapoly0177s0008 Marchantia polymorpha HOM05D001925 ORTHO05D005701 2.4e-11 73.6 106 34.0
AagrBONN_evm.TU.Sc2ySwM_368.2511 Anthoceros agrestis HOM05D001925 ORTHO05D005701 3.2e-11 73.2 115 33.9
AUR62022580 Chenopodium quinoa HOM05D001925 ORTHO05D005701 3.2e-11 73.2 109 37.6
TPR.G37845 Trifolium pratense HOM05D001925 ORTHO05D005701 3.2e-11 73.2 101 42.6
Ah.05g180520 Amaranthus hybridus HOM05D001925 ORTHO05D001453 9.2e-11 71.6 210 25.2
EL10Ac1g00402 Beta vulgaris HOM05D001925 ORTHO05D005701 1.2e-10 71.2 109 35.8
PSO384G0118 Papaver somniferum HOM05D001925 ORTHO05D005701 6.0e-10 68.9 162 38.3
SEGI_03119 Sequoiadendron giganteum HOM05D001925 ORTHO05D005701 1.0e-09 68.2 52 57.7
CBR_g58810 Chara braunii HOM05D001925 ORTHO05D005701 2.3e-09 67.0 65 49.2
SMO147G0283 Selaginella moellendorffii HOM05D001925 ORTHO05D005701 1.1e-08 64.7 127 28.3
arahy.Tifrunner.gnm1.ann1.D25PMP Arachis hypogaea HOM05D001925 ORTHO05D005701 1.9e-08 63.9 92 40.2
arahy.Tifrunner.gnm1.ann1.SID920 Arachis hypogaea HOM05D001925 ORTHO05D005701 2.5e-08 63.5 44 59.1
PSO339G3045 Papaver somniferum HOM05D001925 ORTHO05D005701 9.5e-08 61.6 106 40.6
Pp3c17_13600 Physcomitrium patens HOM05D001925 ORTHO05D005701 4.0e-06 56.2 52 46.2


User provided reference genes

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