Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 8.0e-178 627.1 342 100.0
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 6.7e-108 394.8 347 67.1
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 3.3e-107 392.5 344 69.2
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 5.7e-99 365.2 343 65.3
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 3.7e-98 362.5 342 57.9
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 3.1e-97 359.4 349 58.5
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 9.0e-97 357.8 343 63.0
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 7.6e-96 354.8 345 57.4
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 2.1e-93 346.7 319 59.2
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 2.3e-92 343.2 343 56.6
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 5.1e-92 342.0 320 61.9
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 4.3e-91 339.0 339 56.6
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 4.3e-91 339.0 351 54.4
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 8.2e-90 334.7 390 51.3
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 2.0e-88 330.1 350 52.3
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 2.9e-87 326.2 354 55.1
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 3.8e-87 325.9 362 52.5
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 3.8e-87 325.9 350 54.3
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 5.0e-87 325.5 356 51.1
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 4.2e-86 322.4 359 52.6
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 5.5e-86 322.0 320 57.2
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 5.5e-86 322.0 326 54.3
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 1.2e-85 320.9 299 58.9
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 1.1e-83 314.3 351 51.0
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 1.1e-83 314.3 449 45.4
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 7.4e-83 311.6 428 46.0
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 2.8e-82 309.7 329 55.0
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 6.3e-82 308.5 389 49.1
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 1.8e-81 307.0 351 52.4
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 2.4e-81 306.6 347 51.6
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 4.1e-81 305.8 352 54.5
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 4.1e-81 305.8 471 42.7
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 2.6e-80 303.1 461 42.7
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 2.6e-80 303.1 339 52.8
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 3.4e-80 302.8 341 50.7
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 1.7e-79 300.4 453 44.2
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 5.0e-79 298.9 437 46.5
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 6.5e-79 298.5 406 47.8
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 1.9e-78 297.0 483 41.2
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 1.9e-78 297.0 360 49.2
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.9e-78 297.0 372 49.2
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 2.5e-78 296.6 331 52.3
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 4.2e-78 295.8 455 42.0
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 2.1e-77 293.5 477 38.4
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 3.6e-77 292.7 415 44.6
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 8.0e-77 291.6 365 49.3
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 8.0e-77 291.6 366 47.5
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 8.0e-77 291.6 358 53.9
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 1.4e-76 290.8 482 41.5
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 2.3e-76 290.0 431 45.0
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 5.2e-76 288.9 438 41.1
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 1.5e-75 287.3 278 63.3
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 2.6e-75 286.6 519 39.5
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 3.3e-75 286.2 439 44.4
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 4.4e-75 285.8 397 46.1
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 7.4e-75 285.0 344 49.1
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 7.4e-75 285.0 430 42.3
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 1.1e-73 281.2 281 57.7
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.8e-73 280.4 448 41.5
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 5.3e-73 278.9 501 39.3
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 7.0e-73 278.5 448 41.3
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 1.6e-72 277.3 431 42.5
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 5.9e-72 275.4 492 37.6
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 3.8e-71 272.7 394 43.7
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 5.0e-71 272.3 505 38.6
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 6.5e-71 271.9 478 38.9
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 8.5e-71 271.6 440 41.4
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 1.1e-70 271.2 432 41.2
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 3.2e-70 269.6 447 40.9
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 4.2e-70 269.2 484 37.4
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 7.2e-70 268.5 382 43.2
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 7.2e-70 268.5 382 43.2
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 1.2e-69 267.7 489 36.4
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 1.2e-69 267.7 489 36.4
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 1.6e-69 267.3 502 36.7
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 2.1e-69 266.9 329 49.2
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.7e-69 266.5 493 36.9
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 3.6e-69 266.2 519 37.6
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 8.0e-69 265.0 427 43.1
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 1.4e-68 264.2 453 39.5
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 2.3e-68 263.5 282 53.2
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 2.3e-68 263.5 442 38.9
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 5.2e-68 262.3 468 37.6
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 5.2e-68 262.3 359 45.7
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 6.7e-68 261.9 412 42.2
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 2.6e-67 260.0 380 43.2
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 3.7e-66 256.1 521 35.5
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 2.4e-65 253.4 407 40.5
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 3.1e-65 253.1 478 40.2
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 4.5e-64 249.2 380 42.1
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 7.7e-64 248.4 418 39.5
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 1.0e-63 248.1 413 39.2
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 1.7e-63 247.3 405 40.2
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 1.9e-62 243.8 439 38.0
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 1.6e-61 240.7 401 39.9
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 8.0e-61 238.4 469 37.7
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 3.0e-60 236.5 487 35.7
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 5.2e-60 235.7 400 39.5
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 5.2e-60 235.7 350 44.6
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 1.7e-58 230.7 406 39.4
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 1.7e-58 230.7 496 36.3
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-58 230.7 248 53.6
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 2.8e-58 229.9 574 32.1
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 3.7e-58 229.6 466 35.4
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 3.7e-58 229.6 409 38.1
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 5.4e-57 225.7 452 36.3
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 1.2e-56 224.6 309 45.3
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 1.6e-56 224.2 593 31.4
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 2.7e-56 223.4 446 36.1
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 4.5e-56 222.6 401 36.7
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 9.5e-54 214.9 455 35.2
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 8.0e-53 211.8 496 33.1
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 8.0e-53 211.8 496 33.1
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 5.7e-51 205.7 452 35.0
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 6.3e-50 202.2 168 64.3
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 4.1e-49 199.5 313 42.2
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 1.2e-48 198.0 358 39.7
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 2.1e-45 187.2 149 66.4
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 8.9e-44 181.8 359 37.0
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 7.5e-43 178.7 141 64.5
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 2.4e-41 173.7 140 65.0
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 1.3e-39 167.9 311 39.5
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 1.2e-35 154.8 357 34.2
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 2.0e-35 154.1 216 46.8
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 5.2e-28 129.4 419 28.9
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 1.2e-27 128.3 112 59.8
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 7.5e-27 125.6 190 44.7
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 6.4e-26 122.5 346 27.7
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 1.6e-16 91.3 92 52.2
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 6.0e-16 89.4 74 58.1
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 1.7e-15 87.8 58 70.7
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 1.1e-12 78.6 51 62.7
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 1.1e-09 68.6 85 44.7


User provided reference genes

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