Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g38440_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 2.8e-123 445.3 225 100.0
MBI04_g28758_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 1.1e-106 390.2 201 99.0
TAR369G0081 Trochodendron aralioides HOM05D007382 ORTHO05D009012 5.3e-45 185.3 181 56.4
Hma1.2p1_0111F.1_g053520 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 5.1e-40 168.7 152 57.9
Ciclev10012925m.g Citrus clementina HOM05D007382 ORTHO05D009012 2.8e-38 162.9 162 54.9
Dinv37282 Davidia involucrata HOM05D007382 ORTHO05D009012 3.7e-38 162.5 154 57.8
CiPaw.10G139200 Carya illinoinensis HOM05D007382 ORTHO05D009012 1.4e-37 160.6 170 52.4
QL07p045887 Quercus lobata HOM05D007382 ORTHO05D009012 1.8e-37 160.2 160 52.5
Nn2g10574 Nelumbo nucifera HOM05D007382 ORTHO05D009012 2.4e-37 159.8 152 56.6
Prupe.6G245200 Prunus persica HOM05D007382 ORTHO05D009012 6.9e-37 158.3 152 58.6
Hma1.2p1_0111F.1_g053480 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 4.5e-36 155.6 152 54.6
Cfa017470 Carpinus fangiana HOM05D007382 ORTHO05D009012 5.9e-36 155.2 152 53.9
Haze_20685 Corylus avellana HOM05D007382 ORTHO05D009012 1.0e-35 154.5 152 53.3
Oeu029114.1 Olea europaea HOM05D007382 ORTHO05D009012 1.3e-35 154.1 152 55.9
Nn3g20330 Nelumbo nucifera HOM05D007382 ORTHO05D009012 1.7e-35 153.7 145 57.2
GSVIVG01025574001 Vitis vinifera HOM05D002855 ORTHO05D009676 1.9e-34 150.2 127 59.1
AUR62042292 Chenopodium quinoa HOM05D002855 ORTHO05D009012 2.5e-34 149.8 146 58.2
Cc06_g15490 Coffea canephora HOM05D007382 ORTHO05D009012 7.2e-34 148.3 135 56.3
Eucgr.A01209 Eucalyptus grandis HOM05D007382 ORTHO05D009012 1.2e-33 147.5 156 51.9
CSS0017861 Camellia sinensis var. sinensis HOM05D007382 ORTHO05D009012 7.9e-33 144.8 149 54.4
ATR0709G053 Amborella trichopoda HOM05D007382 ORTHO05D009012 1.8e-32 143.7 130 58.5
CANSAT80G2903 Cannabis sativa HOM05D007382 ORTHO05D009012 3.0e-32 142.9 131 56.5
Phvul.001G173000 Phaseolus vulgaris HOM05D007382 ORTHO05D009012 3.0e-32 142.9 159 49.7
VMungo1383G3160 Vigna mungo HOM05D007382 ORTHO05D009012 3.9e-32 142.5 159 50.9
AUR62036838 Chenopodium quinoa HOM05D007382 ORTHO05D009012 5.1e-32 142.1 165 52.1
Lsat_1_v5_gn_2_111101 Lactuca sativa HOM05D007382 ORTHO05D009012 5.1e-32 142.1 149 50.3
Manes.09G071800 Manihot esculenta HOM05D007382 ORTHO05D009012 8.7e-32 141.4 139 54.0
Hund10951 Selenicereus undatus HOM05D007382 ORTHO05D009012 8.7e-32 141.4 183 45.9
Lsat_1_v5_gn_2_110741 Lactuca sativa HOM05D007382 ORTHO05D009012 1.1e-31 141.0 149 50.3
MD12G1130200 Malus domestica HOM05D007382 ORTHO05D009012 1.5e-31 140.6 158 49.4
Migut.J00393 Erythranthe guttata HOM05D007382 ORTHO05D009012 1.9e-31 140.2 153 51.6
Glyma.19G176400 Glycine max HOM05D007382 ORTHO05D009012 2.5e-31 139.8 162 48.8
Peaxi162Scf00472g00081 Petunia axillaris HOM05D007382 ORTHO05D009012 2.5e-31 139.8 153 51.6
Zm00001eb148770 Zea mays HOM05D007382 ORTHO05D009012 2.5e-31 139.8 199 44.7
Nitab4.5_0007103g0020 Nicotiana tabacum HOM05D007382 ORTHO05D009012 3.3e-31 139.4 152 50.0
EL10Ac7g17270 Beta vulgaris HOM05D007382 ORTHO05D009012 5.7e-31 138.7 166 51.8
Potri.006G216000 Populus trichocarpa HOM05D007382 ORTHO05D009012 5.7e-31 138.7 151 51.7
Sabra06G0166500 Salix brachista HOM05D007382 ORTHO05D009012 5.7e-31 138.7 152 54.6
MELO3C003080.2 Cucumis melo HOM05D007382 ORTHO05D009012 7.4e-31 138.3 156 48.1
RcHm_v2.0_Chr3g0468081 Rosa chinensis HOM05D007382 ORTHO05D009012 1.6e-30 137.1 144 51.4
Thecc.05G050100 Theobroma cacao HOM05D007382 ORTHO05D009012 1.6e-30 137.1 130 56.2
Glyma.03G175900 Glycine max HOM05D007382 ORTHO05D009012 2.2e-30 136.7 160 45.6
Nitab4.5_0000202g0370 Nicotiana tabacum HOM05D007382 ORTHO05D009012 2.2e-30 136.7 152 49.3
Lsat_1_v5_gn_2_110841 Lactuca sativa HOM05D007382 ORTHO05D009012 4.8e-30 135.6 149 49.0
MSTRG.19120 Avicennia marina HOM05D007382 ORTHO05D009012 6.3e-30 135.2 129 56.6
Ah.08g212080 Amaranthus hybridus HOM05D007382 ORTHO05D009012 1.1e-29 134.4 165 46.7
Duzib093G1372 Durio zibethinus HOM05D007382 ORTHO05D009012 1.8e-29 133.7 130 54.6
Sc01g0003740 Simmondsia chinensis HOM05D007382 ORTHO05D009012 1.8e-29 133.7 148 50.7
FAN05G3594 Fragaria x ananassa HOM05D007382 ORTHO05D009012 4.1e-29 132.5 149 49.0
FAN14G4413 Fragaria x ananassa HOM05D002855 ORTHO05D009012 4.1e-29 132.5 151 49.0
FAN09G0189 Fragaria x ananassa HOM05D007382 ORTHO05D009012 6.9e-29 131.7 142 50.0
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.9e-29 131.7 142 50.0
CDE05G2022 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 9.0e-29 131.3 187 45.5
FvH4_6g14870 Fragaria vesca HOM05D007382 ORTHO05D009012 9.0e-29 131.3 187 44.4
Sopen10g033880 Solanum pennellii HOM05D007382 ORTHO05D009012 9.0e-29 131.3 130 50.8
HanXRQChr07g0195861 Helianthus annuus HOM05D007382 ORTHO05D009012 1.2e-28 131.0 136 49.3
TWI77G0838 Tripterygium wilfordii HOM05D007382 ORTHO05D009012 1.5e-28 130.6 138 54.3
CsaV3_4G024470 Cucumis sativus L. HOM05D007382 ORTHO05D009012 2.0e-28 130.2 156 46.2
Sed0019756 Sechium edule HOM05D007382 ORTHO05D009012 2.0e-28 130.2 161 47.2
CAN.G435.4 Capsicum annuum HOM05D007382 ORTHO05D009012 2.6e-28 129.8 130 51.5
Gohir.D04G117000 Gossypium hirsutum HOM05D007382 ORTHO05D009012 2.6e-28 129.8 132 52.3
Gorai.009G421900 Gossypium raimondii HOM05D007382 ORTHO05D009012 2.6e-28 129.8 132 52.3
Solyc10g084440.3 Solanum lycopersicum HOM05D007382 ORTHO05D009012 5.9e-28 128.6 130 50.0
Gohir.A04G077800 Gossypium hirsutum HOM05D007382 ORTHO05D009012 7.7e-28 128.3 132 52.3
PGSC0003DMG401010988 Solanum tuberosum HOM05D007382 ORTHO05D009012 7.7e-28 128.3 130 50.0
ClCG04G008690 Citrullus lanatus HOM05D007382 ORTHO05D009012 1.0e-27 127.9 157 43.9
Ca_08808_v3 Cicer arietinum L. HOM05D007382 ORTHO05D009012 1.3e-27 127.5 154 46.8
COL.COLO4_10307 Corchorus olitorius HOM05D007382 ORTHO05D009012 1.7e-27 127.1 138 48.6
Aa31LG10G12820 Aethionema arabicum HOM05D007382 ORTHO05D009012 2.2e-27 126.7 129 52.7
CARHR168440 Cardamine hirsuta HOM05D007382 ORTHO05D009012 6.5e-27 125.2 120 55.8
ECA238G1385 Erigeron canadensis HOM05D007382 ORTHO05D009012 8.5e-27 124.8 145 49.7
PSO384G2862 Papaver somniferum HOM05D007382 ORTHO05D009012 8.5e-27 124.8 162 45.1
SGA_v2.0_scaffold126G33863 Striga asiatica HOM05D007382 ORTHO05D009012 8.5e-27 124.8 139 48.2
Sopen07g005520 Solanum pennellii HOM05D007382 ORTHO05D009012 4.2e-26 122.5 114 56.1
AL5G39780 Arabidopsis lyrata HOM05D007382 ORTHO05D009012 9.4e-26 121.3 130 52.3
Aqoxy5G00351 Aquilegia oxysepala HOM05D007382 ORTHO05D009012 1.6e-25 120.6 134 50.0
Carub.0005s2494 Capsella rubella HOM05D007382 ORTHO05D009012 2.7e-25 119.8 130 53.1
Psat7g058560 Pisum sativum HOM05D007382 ORTHO05D009012 2.7e-25 119.8 121 49.6
Sed0025265 Sechium edule HOM05D007382 ORTHO05D009012 2.7e-25 119.8 161 44.7
HanXRQChr10g0297271 Helianthus annuus HOM05D007382 ORTHO05D009012 4.6e-25 119.0 133 47.4
PGSC0003DMG400038088 Solanum tuberosum HOM05D007382 ORTHO05D009012 4.6e-25 119.0 119 52.9
Solyc07g014660.3 Solanum lycopersicum HOM05D007382 ORTHO05D009012 1.4e-24 117.5 114 53.5
Os01g0835600 Oryza sativa ssp. japonica HOM05D007382 ORTHO05D009012 1.8e-24 117.1 139 43.9
Sp5g04630 Schrenkiella parvula HOM05D007382 ORTHO05D009012 3.0e-24 116.3 124 51.6
TPR.G21464 Trifolium pratense HOM05D007382 ORTHO05D009012 8.8e-24 114.8 177 40.1
Medtr7g100200 Medicago truncatula HOM05D007382 ORTHO05D009012 1.1e-23 114.4 145 45.5
PGSC0003DMG400037466 Solanum tuberosum HOM05D007382 ORTHO05D009012 1.1e-23 114.4 119 51.3
BcaC02g09988 Brassica carinata HOM05D007382 ORTHO05D009012 1.5e-23 114.0 125 49.6
Sopen09g026050 Solanum pennellii HOM05D007382 ORTHO05D009012 1.5e-23 114.0 115 51.3
AT3G58090 Arabidopsis thaliana HOM05D000180 ORTHO05D000099 2.0e-23 113.6 116 55.2
SEGI_34495 Sequoiadendron giganteum HOM05D007382 ORTHO05D009012 9.7e-23 111.3 165 38.8
BcaB02g08277 Brassica carinata HOM05D007382 ORTHO05D009012 1.3e-22 110.9 115 49.6
AUR62043938 Chenopodium quinoa HOM05D002855 ORTHO05D004406 2.8e-22 109.8 138 50.7
Lj1g0005181 Lotus japonicus HOM05D007382 ORTHO05D009012 4.8e-22 109.0 129 47.3
Medtr7g100230 Medicago truncatula HOM05D007382 ORTHO05D009012 6.3e-22 108.6 155 42.6
HPP92_019795 Vanilla planifolia HOM05D007382 ORTHO05D009012 9.1e-21 104.8 152 40.8
CiPaw.15G123900 Carya illinoinensis HOM05D007382 ORTHO05D009012 1.2e-20 104.4 141 45.4
BolC4t24990H Brassica oleracea HOM05D000180 ORTHO05D000099 1.5e-20 104.0 111 51.4
C04p34300 Brassica napus HOM05D000180 ORTHO05D000099 2.0e-20 103.6 111 51.4
A04p02730 Brassica napus HOM05D000180 ORTHO05D000099 2.6e-20 103.2 109 50.5
BraA04t15999Z Brassica rapa HOM05D000180 ORTHO05D000099 2.6e-20 103.2 109 50.5
VMungo1080G1211 Vigna mungo HOM05D007382 ORTHO05D009012 6.5e-19 98.6 88 54.5
CDE09G1151 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 2.5e-18 96.7 183 34.4
unitig_744.g24666 Utricularia gibba HOM05D007382 ORTHO05D009012 1.0e-16 91.3 132 40.9
PGSC0003DMG400035622 Solanum tuberosum HOM05D007382 ORTHO05D009012 6.7e-16 88.6 114 39.5
CDE12G0689 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 4.4e-15 85.9 152 34.9
Lalb_Chr20g0113021 Lupinus albus HOM05D007382 ORTHO05D009012 4.8e-14 82.4 201 31.8
Lalb_Chr25g0289341 Lupinus albus HOM05D007382 ORTHO05D009012 6.5e-11 72.0 95 44.2
ATR0665G317 Amborella trichopoda HOM05D007382 ORTHO05D009012 7.2e-10 68.6 79 44.3
SEGI_03776 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 1.4e-08 64.3 66 48.5
CBR_g41746 Chara braunii HOM05D007382 ORTHO05D009012 1.5e-07 60.8 108 35.2
ATR0829G079 Amborella trichopoda HOM05D016889 ORTHO05D026570 5.7e-07 58.9 104 40.4
SMO147G0006 Selaginella moellendorffii HOM05D016889 ORTHO05D026570 7.5e-07 58.5 136 32.4
Pp3c17_18030 Physcomitrium patens HOM05D016889 ORTHO05D026570 8.2e-06 55.1 116 33.6


User provided reference genes

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