Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g35662_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D243469 6.6e-41 170.2 85 100.0
MBI04_g14364_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000538 2.8e-15 85.1 73 58.9
MBI04_g35664_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000538 7.9e-10 67.0 45 71.1
Sopen08g027780 Solanum pennellii HOM05D000016 ORTHO05D000538 8.8e-09 63.5 85 40.0
Nitab4.5_0004153g0080 Nicotiana tabacum HOM05D000016 ORTHO05D000538 1.9e-08 62.4 75 42.7
TAR626G1953 Trochodendron aralioides HOM05D000016 ORTHO05D000538 1.9e-08 62.4 76 39.5
Nitab4.5_0013378g0010 Nicotiana tabacum HOM05D000016 ORTHO05D000538 2.5e-08 62.0 79 43.0
PGSC0003DMG400017124 Solanum tuberosum HOM05D000016 ORTHO05D000538 2.5e-08 62.0 79 41.8
Migut.E00870 Erythranthe guttata HOM05D000016 ORTHO05D000538 3.3e-08 61.6 78 41.0
Migut.O00364 Erythranthe guttata HOM05D000016 ORTHO05D000538 3.3e-08 61.6 78 41.0
PSO478G0193 Papaver somniferum HOM05D000016 ORTHO05D000538 4.3e-08 61.2 75 41.3
PSO782G0962 Papaver somniferum HOM05D000016 ORTHO05D000538 4.3e-08 61.2 75 41.3
Migut.E00859 Erythranthe guttata HOM05D000016 ORTHO05D000538 5.7e-08 60.8 78 41.0
Migut.E01616 Erythranthe guttata HOM05D000016 ORTHO05D000538 5.7e-08 60.8 78 41.0
Migut.E01706 Erythranthe guttata HOM05D000016 ORTHO05D000538 5.7e-08 60.8 78 41.0
Migut.E01712 Erythranthe guttata HOM05D000016 ORTHO05D000538 5.7e-08 60.8 78 41.0
Migut.F01433 Erythranthe guttata HOM05D000016 ORTHO05D000538 5.7e-08 60.8 78 41.0
MBI16_g06070_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000538 5.7e-08 60.8 53 52.8
Nitab4.5_0004153g0090 Nicotiana tabacum HOM05D000016 ORTHO05D000538 5.7e-08 60.8 79 43.0
Hund11568 Selenicereus undatus HOM05D000016 ORTHO05D000538 5.7e-08 60.8 80 38.8
Nn4g26354 Nelumbo nucifera HOM05D000016 ORTHO05D000538 7.4e-08 60.5 78 41.0
Nitab4.5_0006822g0010 Nicotiana tabacum HOM05D000016 ORTHO05D000538 7.4e-08 60.5 79 41.8
PGSC0003DMG400003961 Solanum tuberosum HOM05D000016 ORTHO05D000538 7.4e-08 60.5 79 40.5
Migut.E01752 Erythranthe guttata HOM05D000016 ORTHO05D000538 9.7e-08 60.1 78 41.0
Solyc08g079420.3 Solanum lycopersicum HOM05D000016 ORTHO05D000538 9.7e-08 60.1 79 40.5
TAR375G0971 Trochodendron aralioides HOM05D000016 ORTHO05D000538 9.7e-08 60.1 79 38.0
TAR375G0454 Trochodendron aralioides HOM05D000016 ORTHO05D000538 1.3e-07 59.7 79 38.0
MBI16_g31130_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000538 1.7e-07 59.3 53 49.1
QL12p014455 Quercus lobata HOM05D000016 ORTHO05D000538 1.7e-07 59.3 79 36.7
TAR375G0773 Trochodendron aralioides HOM05D000016 ORTHO05D000538 1.7e-07 59.3 79 38.0
SalBow6G2516 Salvia bowleyana HOM05D000016 ORTHO05D000538 2.2e-07 58.9 79 36.7
CANSAT21G0634 Cannabis sativa HOM05D000016 ORTHO05D000538 2.8e-07 58.5 56 44.6
Migut.D01898 Erythranthe guttata HOM05D000016 ORTHO05D000538 2.8e-07 58.5 52 51.9
Migut.E01718 Erythranthe guttata HOM05D000016 ORTHO05D000538 2.8e-07 58.5 78 38.5
MBI16_g06071_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000538 2.8e-07 58.5 53 50.9
Sopen08g027790 Solanum pennellii HOM05D000016 ORTHO05D000538 2.8e-07 58.5 79 39.2
CiPaw.14G083900 Carya illinoinensis HOM05D000016 ORTHO05D000538 3.7e-07 58.2 80 38.8
Migut.E01737 Erythranthe guttata HOM05D000016 ORTHO05D000538 3.7e-07 58.2 78 39.7
CiPaw.08G109300 Carya illinoinensis HOM05D000016 ORTHO05D000538 4.8e-07 57.8 53 49.1
CiPaw.08G109500 Carya illinoinensis HOM05D000016 ORTHO05D000538 4.8e-07 57.8 72 40.3
CiPaw.14G084300 Carya illinoinensis HOM05D000016 ORTHO05D000538 4.8e-07 57.8 79 39.2
Eucgr.D02009 Eucalyptus grandis HOM05D000016 ORTHO05D000538 4.8e-07 57.8 75 34.7
CiPaw.14G083500 Carya illinoinensis HOM05D000016 ORTHO05D000538 6.3e-07 57.4 79 38.0
Migut.E01721 Erythranthe guttata HOM05D000016 ORTHO05D000538 6.3e-07 57.4 78 38.5
Lsat_1_v5_gn_3_2841 Lactuca sativa HOM05D000016 ORTHO05D000538 6.3e-07 57.4 78 35.9
Lsat_1_v5_gn_3_2961 Lactuca sativa HOM05D000016 ORTHO05D000538 6.3e-07 57.4 75 38.7
Lsat_1_v5_gn_3_2981 Lactuca sativa HOM05D000016 ORTHO05D000538 6.3e-07 57.4 75 38.7
MBI04_g44993_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000538 6.3e-07 57.4 72 41.7
MBI16_g31136_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000538 6.3e-07 57.4 76 38.2
TAR629G0268 Trochodendron aralioides HOM05D000016 ORTHO05D000538 6.3e-07 57.4 53 49.1
arahy.Tifrunner.gnm1.ann1.MCM1YY Arachis hypogaea HOM05D000016 ORTHO05D000538 8.2e-07 57.0 79 38.0
CiPaw.11G148700 Carya illinoinensis HOM05D000016 ORTHO05D000538 8.2e-07 57.0 80 37.5
DCAR_008457 Daucus carota HOM05D000016 ORTHO05D000538 8.2e-07 57.0 75 40.0
PSO280G0003 Papaver somniferum HOM05D000016 ORTHO05D000538 8.2e-07 57.0 53 47.2
ECA234G0107 Erigeron canadensis HOM05D000016 ORTHO05D000538 1.1e-06 56.6 78 38.5
RcHm_v2.0_Chr4g0419951 Rosa chinensis HOM05D000016 ORTHO05D000538 1.1e-06 56.6 78 38.5
RcHm_v2.0_Chr4g0420051 Rosa chinensis HOM05D000016 ORTHO05D000538 1.1e-06 56.6 78 38.5
Ah.12g056200 Amaranthus hybridus HOM05D000016 ORTHO05D000538 1.4e-06 56.2 78 35.9
CiPaw.08G133200 Carya illinoinensis HOM05D000016 ORTHO05D000538 1.4e-06 56.2 53 47.2
CiPaw.11G148600 Carya illinoinensis HOM05D000016 ORTHO05D000538 1.4e-06 56.2 53 47.2
CiPaw.11G148800 Carya illinoinensis HOM05D000016 ORTHO05D000538 1.4e-06 56.2 80 37.5
Ca_12276_v3 Cicer arietinum L. HOM05D000016 ORTHO05D000538 1.4e-06 56.2 75 40.0
Glyma.17G134100 Glycine max HOM05D000016 ORTHO05D000538 1.4e-06 56.2 75 37.3
TAR375G0115 Trochodendron aralioides HOM05D000016 ORTHO05D000538 1.4e-06 56.2 79 36.7
CANSAT21G0994 Cannabis sativa HOM05D000016 ORTHO05D000538 1.8e-06 55.8 75 37.3
CAN.G1903.4 Capsicum annuum HOM05D000016 ORTHO05D000538 1.8e-06 55.8 75 38.7
CAN.G1903.6 Capsicum annuum HOM05D000016 ORTHO05D000538 1.8e-06 55.8 75 38.7
HanXRQChr09g0247481 Helianthus annuus HOM05D000016 ORTHO05D000538 1.8e-06 55.8 53 45.3
HanXRQChr13g0417081 Helianthus annuus HOM05D000016 ORTHO05D000538 1.8e-06 55.8 53 45.3
Aqoxy1G04084 Aquilegia oxysepala HOM05D000016 ORTHO05D000109 2.4e-06 55.5 53 49.1
DCAR_000851 Daucus carota HOM05D000016 ORTHO05D000538 2.4e-06 55.5 75 38.7
MBI17_g25942_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000109 2.4e-06 55.5 53 49.1
Os08g0547900 Oryza sativa ssp. japonica HOM05D000016 ORTHO05D000538 2.4e-06 55.5 75 40.0
CiPaw.14G073500 Carya illinoinensis HOM05D000016 ORTHO05D000538 3.1e-06 55.1 53 45.3
Migut.E01183 Erythranthe guttata HOM05D000016 ORTHO05D000538 3.1e-06 55.1 78 37.2
Migut.E01184 Erythranthe guttata HOM05D000016 ORTHO05D000538 3.1e-06 55.1 75 37.3
Migut.E01714 Erythranthe guttata HOM05D000016 ORTHO05D000538 3.1e-06 55.1 78 37.2
Hma1.2p1_1290F.1_g273460 Hydrangea macrophylla HOM05D000016 ORTHO05D000538 3.1e-06 55.1 79 35.4
Lsat_1_v5_gn_3_2821 Lactuca sativa HOM05D000016 ORTHO05D000538 3.1e-06 55.1 78 34.6
Lj8A255T58 Lonicera japonica HOM05D000016 ORTHO05D000538 3.1e-06 55.1 75 40.0
TWI81G0995 Tripterygium wilfordii HOM05D000016 ORTHO05D000538 3.1e-06 55.1 78 35.9
CANSAT21G0271 Cannabis sativa HOM05D000016 ORTHO05D000538 4.1e-06 54.7 53 47.2
AUR62027281 Chenopodium quinoa HOM05D000016 ORTHO05D000538 4.1e-06 54.7 78 38.5
HanXRQChr03g0088031 Helianthus annuus HOM05D000016 ORTHO05D000538 4.1e-06 54.7 79 38.0
HanXRQChr13g0390831 Helianthus annuus HOM05D000016 ORTHO05D000538 4.1e-06 54.7 53 45.3
Sp6g05260 Schrenkiella parvula HOM05D000016 ORTHO05D000538 4.1e-06 54.7 75 36.0
CSS0031971 Camellia sinensis var. sinensis HOM05D000025 ORTHO05D000136 5.3e-06 54.3 72 37.5
CSS0049993 Camellia sinensis var. sinensis HOM05D000025 ORTHO05D000136 5.3e-06 54.3 72 37.5
CiPaw.11G148500 Carya illinoinensis HOM05D000016 ORTHO05D000538 5.3e-06 54.3 79 38.0
Migut.A00827 Erythranthe guttata HOM05D000016 ORTHO05D000538 5.3e-06 54.3 52 46.2
MBI16_g06069_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D013991 5.3e-06 54.3 53 47.2
Nn1g02973 Nelumbo nucifera HOM05D000025 ORTHO05D020817 5.3e-06 54.3 53 45.3
Os01g0700500 Oryza sativa ssp. japonica HOM05D000016 ORTHO05D000538 5.3e-06 54.3 52 46.2
Psat0s4551g0080 Pisum sativum HOM05D000016 ORTHO05D000538 5.3e-06 54.3 75 37.3
arahy.Tifrunner.gnm1.ann1.NT79F1 Arachis hypogaea HOM05D000016 ORTHO05D000538 6.9e-06 53.9 79 36.7
CAN.G1337.1 Capsicum annuum HOM05D000016 ORTHO05D000538 6.9e-06 53.9 52 48.1
CAN.G1903.5 Capsicum annuum HOM05D000016 ORTHO05D000538 6.9e-06 53.9 79 36.7
AUR62007451 Chenopodium quinoa HOM05D000016 ORTHO05D000538 6.9e-06 53.9 78 37.2
CsaV3_5G003820 Cucumis sativus L. HOM05D000016 ORTHO05D000538 6.9e-06 53.9 52 44.2
Glyma.17G134200 Glycine max HOM05D000016 ORTHO05D000538 6.9e-06 53.9 79 34.2
MBI04_g35665_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000538 6.9e-06 53.9 75 36.0
Phvul.003G214375 Phaseolus vulgaris HOM05D000016 ORTHO05D000538 6.9e-06 53.9 75 37.3
QL12p014484 Quercus lobata HOM05D000016 ORTHO05D000538 6.9e-06 53.9 53 45.3
SEGI_03098 Sequoiadendron giganteum HOM05D000016 ORTHO05D000538 6.9e-06 53.9 75 36.0
vmacro14045 Vaccinium macrocarpon HOM05D000016 ORTHO05D000538 6.9e-06 53.9 78 37.2
vmacro14061 Vaccinium macrocarpon HOM05D000016 ORTHO05D000538 6.9e-06 53.9 72 38.9
CiPaw.10G154500 Carya illinoinensis HOM05D000016 ORTHO05D000538 9.1e-06 53.5 53 45.3
Cc08_g11230 Coffea canephora HOM05D000016 ORTHO05D000538 9.1e-06 53.5 75 37.3
Dinv21575 Davidia involucrata HOM05D000016 ORTHO05D000538 9.1e-06 53.5 79 34.2
MBI12_g46948_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000538 9.1e-06 53.5 53 43.4
Prupe.5G078800 Prunus persica HOM05D000016 ORTHO05D000538 9.1e-06 53.5 78 35.9
Sp6g05270 Schrenkiella parvula HOM05D000016 ORTHO05D000538 9.1e-06 53.5 75 34.7
vmacro14047 Vaccinium macrocarpon HOM05D000016 ORTHO05D000538 9.1e-06 53.5 52 48.1


User provided reference genes

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